Wall clock time and date at job start Tue Mar 31 2020 12:00:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.42900 * 109.47075 * 2 1 4 4 C 1.36009 * 117.00083 * 180.02562 * 3 2 1 5 5 C 1.38695 * 119.97980 * 180.02562 * 4 3 2 6 6 C 1.38111 * 120.01534 * 180.02562 * 5 4 3 7 7 C 1.38856 * 119.98595 * 359.97438 * 6 5 4 8 8 N 1.39937 * 120.02480 * 180.02562 * 7 6 5 9 9 C 1.46951 * 111.00185 * 179.97438 * 8 7 6 10 10 C 1.53053 * 109.36532 * 183.18968 * 9 8 7 11 11 N 1.46960 * 109.36377 * 301.59772 * 10 9 8 12 12 C 1.46893 * 111.00208 * 183.18552 * 11 10 9 13 13 H 1.08997 * 109.47228 * 295.12619 * 12 11 10 14 14 C 1.50705 * 109.47171 * 55.12239 * 12 11 10 15 15 H 1.08007 * 119.99475 * 5.78698 * 14 12 11 16 16 C 1.37870 * 120.00286 * 185.78488 * 14 12 11 17 17 N 1.31512 * 119.99887 * 5.48050 * 16 14 12 18 18 Si 1.86799 * 119.99967 * 185.48303 * 16 14 12 19 19 H 1.48505 * 109.47255 * 269.99492 * 18 16 14 20 20 H 1.48499 * 109.47169 * 29.99674 * 18 16 14 21 21 H 1.48501 * 109.47076 * 149.99955 * 18 16 14 22 22 C 1.52995 * 109.47574 * 175.12227 * 12 11 10 23 23 C 1.53004 * 109.47034 * 304.37351 * 22 12 11 24 24 C 1.46961 * 110.87777 * 59.31718 * 11 10 9 25 25 C 1.46955 * 110.99883 * 303.80281 * 8 7 6 26 26 C 1.38866 * 119.95857 * 0.27436 * 7 6 5 27 27 C 1.38113 * 119.97797 * 359.44567 * 26 7 6 28 28 H 1.08998 * 109.47400 * 60.00107 * 1 2 3 29 29 H 1.09006 * 109.46776 * 179.97438 * 1 2 3 30 30 H 1.08998 * 109.47035 * 299.99312 * 1 2 3 31 31 H 1.09004 * 109.47156 * 240.00256 * 2 1 3 32 32 H 1.09004 * 109.47529 * 120.00340 * 2 1 3 33 33 H 1.08002 * 119.99236 * 359.97438 * 5 4 3 34 34 H 1.08000 * 120.00537 * 179.97438 * 6 5 4 35 35 H 1.08998 * 109.48891 * 63.22389 * 9 8 7 36 36 H 1.09006 * 109.48970 * 303.15557 * 9 8 7 37 37 H 1.08999 * 109.48853 * 181.63385 * 10 9 8 38 38 H 1.09000 * 109.48753 * 61.56389 * 10 9 8 39 39 H 0.96999 * 120.00478 * 355.13508 * 17 16 14 40 40 H 1.09003 * 109.46762 * 64.36679 * 22 12 11 41 41 H 1.08997 * 109.47822 * 184.36978 * 22 12 11 42 42 H 1.08996 * 109.46882 * 304.98915 * 23 22 12 43 43 H 1.09003 * 109.47242 * 64.98403 * 23 22 12 44 44 H 1.09002 * 109.47500 * 184.98736 * 23 22 12 45 45 H 1.09003 * 109.48566 * 60.65122 * 24 11 10 46 46 H 1.08997 * 109.48951 * 180.71022 * 24 11 10 47 47 H 1.09005 * 109.48186 * 296.77572 * 25 8 7 48 48 H 1.09000 * 109.49389 * 56.83496 * 25 8 7 49 49 H 1.07996 * 120.00895 * 179.70816 * 26 7 6 50 50 H 1.08000 * 119.98714 * 180.27666 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 3.3547 1.5255 -0.0005 5 6 3.8843 2.8074 0.0000 6 6 5.2534 2.9892 -0.0011 7 6 6.0997 1.8883 -0.0022 8 7 7.4870 2.0716 -0.0027 9 6 8.1888 0.7806 -0.0032 10 6 9.6979 1.0232 0.0765 11 7 10.1196 1.8490 -1.0636 12 6 11.5758 2.0415 -1.0642 13 1 11.8669 2.6149 -0.1841 14 6 12.2601 0.6990 -1.0379 15 1 11.6762 -0.2062 -1.1167 16 6 13.6312 0.6264 -0.9134 17 7 14.3318 1.7205 -0.7094 18 14 14.4938 -1.0261 -1.0345 19 1 14.5878 -1.6356 0.3165 20 1 13.7205 -1.9237 -1.9298 21 1 15.8589 -0.8326 -1.5862 22 6 11.9896 2.8001 -2.3268 23 6 11.4853 2.0495 -3.5610 24 6 9.4176 3.1401 -1.0632 25 6 7.9085 2.8980 -1.1425 26 6 5.5685 0.6053 -0.0079 27 6 4.1992 0.4253 -0.0010 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5137 0.8900 31 1 1.8933 -0.5138 -0.8900 32 1 1.8934 -0.5139 0.8900 33 1 3.2260 3.6635 0.0004 34 1 5.6656 3.9874 -0.0011 35 1 7.9554 0.2401 -0.9206 36 1 7.8691 0.1925 0.8571 37 1 10.2219 0.0679 0.0470 38 1 9.9345 1.5397 1.0068 39 1 13.8933 2.5857 -0.7169 40 1 11.5567 3.8003 -2.3079 41 1 13.0762 2.8752 -2.3660 42 1 11.8466 1.0215 -3.5338 43 1 10.3953 2.0514 -3.5673 44 1 11.8547 2.5407 -4.4612 45 1 9.6511 3.6806 -0.1458 46 1 9.7373 3.7282 -1.9234 47 1 7.6718 2.3819 -2.0730 48 1 7.3845 3.8533 -1.1127 49 1 6.2260 -0.2515 -0.0135 50 1 3.7859 -0.5726 -0.0009 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001255179482.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:00:21 Heat of formation + Delta-G solvation = 1.135923 kcal Electronic energy + Delta-G solvation = -27169.606081 eV Core-core repulsion = 23583.142801 eV Total energy + Delta-G solvation = -3586.463279 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 318.205 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -40.53355 -39.30514 -37.56004 -35.60100 -33.06187 -31.95404 -31.59910 -31.00517 -30.20580 -28.68222 -26.45686 -24.85424 -24.34140 -23.72705 -22.82707 -21.79595 -21.11498 -19.86646 -19.04125 -18.45798 -17.08597 -16.66932 -16.30988 -15.97879 -15.03310 -14.85143 -14.58069 -14.24512 -14.15666 -13.83785 -13.68681 -13.61515 -13.51937 -13.40170 -13.04986 -12.77414 -12.51957 -12.35674 -12.02951 -11.91550 -11.79127 -11.50701 -11.22093 -10.98650 -10.97038 -10.85203 -10.80571 -10.70350 -10.40162 -10.13551 -10.12051 -9.86946 -9.67562 -9.23651 -9.04412 -8.44124 -8.37232 -7.46623 -7.30458 -6.33834 -4.06197 1.26496 1.40240 3.04110 3.41660 3.45917 3.60900 3.61290 4.00778 4.48678 4.59524 4.59806 4.74996 4.77801 4.83172 4.92132 5.12716 5.17442 5.25214 5.30619 5.35734 5.42196 5.44083 5.53706 5.59012 5.67059 5.68707 5.75672 5.88094 5.91114 5.95983 6.08326 6.20208 6.27379 6.28905 6.31220 6.36376 6.44198 6.53375 6.59785 6.64977 6.87083 7.02155 7.13427 7.16607 7.22753 7.36322 7.44962 7.46186 7.83868 7.98420 8.35771 8.56606 8.86665 9.64045 11.01950 Molecular weight = 318.20amu Principal moments of inertia in cm(-1) A = 0.024527 B = 0.002593 C = 0.002453 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1141.335247 B =10794.681659 C =11409.679283 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.055 3.945 3 O -0.321 6.321 4 C 0.094 3.906 5 C -0.126 4.126 6 C -0.105 4.105 7 C 0.088 3.912 8 N -0.489 5.489 9 C 0.054 3.946 10 C 0.067 3.933 11 N -0.524 5.524 12 C 0.205 3.795 13 H -0.010 1.010 14 C -0.579 4.579 15 H 0.056 0.944 16 C 0.020 3.980 17 N -0.914 5.914 18 Si 1.068 2.932 19 H -0.290 1.290 20 H -0.288 1.288 21 H -0.285 1.285 22 C -0.115 4.115 23 C -0.120 4.120 24 C 0.050 3.950 25 C 0.066 3.934 26 C -0.133 4.133 27 C -0.180 4.180 28 H 0.065 0.935 29 H 0.076 0.924 30 H 0.065 0.935 31 H 0.059 0.941 32 H 0.060 0.940 33 H 0.129 0.871 34 H 0.131 0.869 35 H 0.050 0.950 36 H 0.076 0.924 37 H 0.096 0.904 38 H 0.029 0.971 39 H 0.271 0.729 40 H 0.021 0.979 41 H 0.065 0.935 42 H 0.062 0.938 43 H 0.044 0.956 44 H 0.019 0.981 45 H 0.030 0.970 46 H 0.079 0.921 47 H 0.048 0.952 48 H 0.075 0.925 49 H 0.131 0.869 50 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -22.654 -1.195 0.379 22.688 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.020 4.020 3 O -0.235 6.235 4 C 0.049 3.951 5 C -0.145 4.145 6 C -0.125 4.125 7 C -0.010 4.010 8 N -0.204 5.204 9 C -0.073 4.073 10 C -0.061 4.061 11 N -0.249 5.249 12 C 0.099 3.901 13 H 0.008 0.992 14 C -0.618 4.618 15 H 0.075 0.925 16 C -0.184 4.184 17 N -0.551 5.551 18 Si 0.897 3.103 19 H -0.216 1.216 20 H -0.214 1.214 21 H -0.211 1.211 22 C -0.153 4.153 23 C -0.177 4.177 24 C -0.079 4.079 25 C -0.060 4.060 26 C -0.154 4.154 27 C -0.199 4.199 28 H 0.084 0.916 29 H 0.095 0.905 30 H 0.084 0.916 31 H 0.078 0.922 32 H 0.078 0.922 33 H 0.147 0.853 34 H 0.148 0.852 35 H 0.068 0.932 36 H 0.094 0.906 37 H 0.114 0.886 38 H 0.047 0.953 39 H 0.082 0.918 40 H 0.040 0.960 41 H 0.084 0.916 42 H 0.081 0.919 43 H 0.063 0.937 44 H 0.038 0.962 45 H 0.048 0.952 46 H 0.097 0.903 47 H 0.066 0.934 48 H 0.094 0.906 49 H 0.149 0.851 50 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges -21.214 -1.774 0.475 21.294 hybrid contribution -1.350 0.583 0.093 1.473 sum -22.564 -1.191 0.569 22.603 Atomic orbital electron populations 1.21768 0.92925 1.02737 1.03430 1.22721 0.95678 0.82357 1.01271 1.86054 1.19239 1.28844 1.89388 1.18850 0.82038 0.94108 1.00151 1.20242 0.94637 0.94715 1.04950 1.20612 0.91671 0.98275 1.01935 1.19021 0.89183 0.93052 0.99759 1.59378 1.02082 1.17524 1.41444 1.22454 0.95132 0.88886 1.00796 1.22029 0.91639 1.00151 0.92302 1.62202 1.08563 1.12841 1.41285 1.19376 0.81884 0.96678 0.92190 0.99215 1.21840 0.93724 0.91646 1.54579 0.92542 1.25705 0.94625 1.04398 0.93717 1.70763 1.39950 0.99014 1.45355 0.83548 0.75867 0.74289 0.76576 1.21644 1.21427 1.21116 1.21643 1.00961 0.95686 0.97043 1.21429 0.99871 1.01213 0.95190 1.22177 0.91830 0.93289 1.00610 1.22295 0.96559 0.96610 0.90492 1.21178 0.94769 0.96792 1.02648 1.21064 0.93880 0.97816 1.07172 0.91586 0.90492 0.91584 0.92227 0.92222 0.85306 0.85160 0.93194 0.90559 0.88628 0.95303 0.91762 0.96004 0.91601 0.91919 0.93709 0.96157 0.95172 0.90268 0.93394 0.90641 0.85136 0.85773 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.90 10.28 37.16 0.38 -0.52 16 2 C 0.06 0.44 5.46 37.16 0.20 0.64 16 3 O -0.32 -3.60 10.14 -19.77 -0.20 -3.80 16 4 C 0.09 1.14 6.69 -39.24 -0.26 0.87 16 5 C -0.13 -1.50 9.98 -39.46 -0.39 -1.89 16 6 C -0.10 -1.31 9.19 -39.40 -0.36 -1.67 16 7 C 0.09 1.22 5.64 -83.70 -0.47 0.75 16 8 N -0.49 -7.50 4.76 -170.91 -0.81 -8.31 16 9 C 0.05 0.86 4.30 -3.77 -0.02 0.84 16 10 C 0.07 1.30 5.32 -3.76 -0.02 1.28 16 11 N -0.52 -10.72 3.72 -227.88 -0.85 -11.56 16 12 C 0.21 4.92 1.38 -68.87 -0.10 4.82 16 13 H -0.01 -0.26 7.65 -51.93 -0.40 -0.66 16 14 C -0.58 -15.20 6.54 -34.44 -0.23 -15.42 16 15 H 0.06 1.50 6.59 -52.48 -0.35 1.15 16 16 C 0.02 0.54 5.23 -17.82 -0.09 0.45 16 17 N -0.91 -26.57 13.10 55.43 0.73 -25.85 16 18 Si 1.07 24.56 29.91 -169.99 -5.08 19.47 16 19 H -0.29 -6.48 7.11 56.52 0.40 -6.08 16 20 H -0.29 -6.34 7.11 56.52 0.40 -5.94 16 21 H -0.29 -6.62 7.11 56.52 0.40 -6.22 16 22 C -0.11 -2.60 4.89 -26.73 -0.13 -2.73 16 23 C -0.12 -2.50 9.51 37.16 0.35 -2.14 16 24 C 0.05 0.88 5.33 -3.77 -0.02 0.86 16 25 C 0.07 1.00 5.38 -3.77 -0.02 0.98 16 26 C -0.13 -1.71 8.82 -39.40 -0.35 -2.06 16 27 C -0.18 -2.10 9.03 -39.46 -0.36 -2.46 16 28 H 0.07 0.40 8.14 -51.93 -0.42 -0.02 16 29 H 0.08 0.31 8.14 -51.93 -0.42 -0.11 16 30 H 0.07 0.40 8.14 -51.93 -0.42 -0.03 16 31 H 0.06 0.43 7.66 -51.93 -0.40 0.04 16 32 H 0.06 0.43 7.66 -51.93 -0.40 0.03 16 33 H 0.13 1.30 8.06 -52.49 -0.42 0.88 16 34 H 0.13 1.47 7.18 -52.49 -0.38 1.10 16 35 H 0.05 0.79 7.57 -51.93 -0.39 0.40 16 36 H 0.08 1.09 7.19 -51.93 -0.37 0.72 16 37 H 0.10 1.98 6.18 -51.93 -0.32 1.65 16 38 H 0.03 0.59 8.14 -51.93 -0.42 0.17 16 39 H 0.27 7.85 5.77 -40.82 -0.24 7.62 16 40 H 0.02 0.45 6.59 -51.93 -0.34 0.10 16 41 H 0.07 1.65 6.12 -51.93 -0.32 1.33 16 42 H 0.06 1.43 7.20 -51.93 -0.37 1.06 16 43 H 0.04 0.89 7.66 -51.93 -0.40 0.49 16 44 H 0.02 0.37 8.14 -51.93 -0.42 -0.05 16 45 H 0.03 0.57 8.14 -51.93 -0.42 0.14 16 46 H 0.08 1.38 6.27 -51.93 -0.33 1.05 16 47 H 0.05 0.75 8.14 -51.93 -0.42 0.33 16 48 H 0.08 0.99 6.82 -51.93 -0.35 0.63 16 49 H 0.13 1.58 5.81 -52.49 -0.30 1.28 16 50 H 0.12 1.17 6.29 -52.49 -0.33 0.84 16 LS Contribution 377.18 15.07 5.68 5.68 Total: -1.00 -29.27 377.18 -10.58 -39.84 By element: Atomic # 1 Polarization: 10.09 SS G_CDS: -8.16 Total: 1.92 kcal Atomic # 6 Polarization: -15.52 SS G_CDS: -1.88 Total: -17.40 kcal Atomic # 7 Polarization: -44.79 SS G_CDS: -0.93 Total: -45.72 kcal Atomic # 8 Polarization: -3.60 SS G_CDS: -0.20 Total: -3.80 kcal Atomic # 14 Polarization: 24.56 SS G_CDS: -5.08 Total: 19.47 kcal Total LS contribution 5.68 Total: 5.68 kcal Total: -29.27 -10.58 -39.84 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001255179482.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.978 kcal (2) G-P(sol) polarization free energy of solvation -29.267 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.711 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.575 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.842 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.136 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds