Wall clock time and date at job start Tue Mar 31 2020 12:33:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.36935 * 119.99897 * 2 1 4 4 H 1.07997 * 120.00390 * 321.91982 * 3 2 1 5 5 C 1.38814 * 120.00018 * 141.91643 * 3 2 1 6 6 N 1.31624 * 120.00018 * 157.19493 * 5 3 2 7 7 Si 1.86795 * 120.00183 * 337.19865 * 5 3 2 8 8 H 1.48499 * 109.47421 * 95.66842 * 7 5 3 9 9 H 1.48502 * 109.47269 * 215.67427 * 7 5 3 10 10 H 1.48504 * 109.46888 * 335.67082 * 7 5 3 11 11 C 1.46498 * 120.00204 * 180.02562 * 2 1 3 12 12 C 1.53002 * 109.47239 * 89.99972 * 11 2 1 13 13 H 1.08994 * 109.46955 * 304.99930 * 12 11 2 14 14 O 1.42898 * 109.47084 * 64.99876 * 12 11 2 15 15 C 1.52998 * 109.47018 * 184.99982 * 12 11 2 16 16 O 1.42905 * 109.46957 * 174.99939 * 15 12 11 17 17 C 1.35930 * 116.99905 * 180.02562 * 16 15 12 18 18 C 1.38692 * 120.04856 * 359.72149 * 17 16 15 19 19 C 1.38263 * 119.93668 * 179.77024 * 18 17 16 20 20 Cl 1.73606 * 119.97186 * 180.25289 * 19 18 17 21 21 C 1.38395 * 120.05532 * 0.50981 * 19 18 17 22 22 C 1.38230 * 120.10105 * 359.74285 * 21 19 18 23 23 C 1.38252 * 120.05658 * 0.02562 * 22 21 19 24 24 Cl 1.73609 * 120.02597 * 179.97438 * 23 22 21 25 25 H 1.08997 * 109.47085 * 265.68115 * 1 2 3 26 26 H 1.08993 * 109.46880 * 25.68647 * 1 2 3 27 27 H 1.09006 * 109.46793 * 145.68597 * 1 2 3 28 28 H 0.97002 * 119.99715 * 180.02562 * 6 5 3 29 29 H 1.08997 * 109.47575 * 329.99688 * 11 2 1 30 30 H 1.09002 * 109.46877 * 209.99846 * 11 2 1 31 31 H 0.96700 * 114.00076 * 60.00768 * 14 12 11 32 32 H 1.09003 * 109.47464 * 295.00061 * 15 12 11 33 33 H 1.09006 * 109.47432 * 54.99872 * 15 12 11 34 34 H 1.07997 * 120.03161 * 359.97438 * 18 17 16 35 35 H 1.07995 * 119.95088 * 179.72469 * 21 19 18 36 36 H 1.08006 * 119.97234 * 179.97438 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1497 1.1859 0.0000 4 1 1.7821 2.0217 -0.5768 5 6 3.3162 1.3139 0.7415 6 7 4.2021 2.2332 0.4212 7 14 3.6287 0.1815 2.1938 8 1 4.4687 -0.9628 1.7575 9 1 4.3324 0.9323 3.2645 10 1 2.3334 -0.3254 2.7140 11 6 2.1975 -1.2687 -0.0006 12 6 2.4526 -1.7097 -1.4433 13 1 1.5063 -1.7541 -1.9823 14 8 3.3209 -0.7715 -2.0817 15 6 3.1062 -3.0931 -1.4457 16 8 3.2381 -3.5552 -2.7915 17 6 3.8038 -4.7781 -2.9714 18 6 4.2283 -5.5149 -1.8757 19 6 4.7990 -6.7605 -2.0610 20 17 5.3247 -7.6863 -0.6898 21 6 4.9565 -7.2675 -3.3391 22 6 4.5389 -6.5326 -4.4328 23 6 3.9633 -5.2887 -4.2523 24 17 3.4397 -4.3660 -5.6266 25 1 -0.3633 -0.0774 1.0247 26 1 -0.3633 0.9261 -0.4454 27 1 -0.3633 -0.8489 -0.5794 28 1 5.0174 2.3223 0.9392 29 1 1.6086 -2.0286 0.5129 30 1 3.1500 -1.1385 0.5133 31 1 4.1837 -0.6803 -1.6546 32 1 4.0920 -3.0300 -0.9849 33 1 2.4854 -3.7893 -0.8816 34 1 4.1101 -5.1174 -0.8785 35 1 5.4066 -8.2387 -3.4822 36 1 4.6632 -6.9301 -5.4293 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068971631.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:33:47 Heat of formation + Delta-G solvation = -45.059156 kcal Electronic energy + Delta-G solvation = -22219.643239 eV Core-core repulsion = 18564.235161 eV Total energy + Delta-G solvation = -3655.408079 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 319.053 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -40.48061 -38.30991 -37.13830 -36.76768 -36.25035 -34.70438 -31.70169 -31.05494 -30.79281 -29.54932 -26.67371 -25.72763 -23.30873 -22.75272 -21.51790 -20.86828 -18.69492 -17.28433 -16.58407 -16.51233 -16.45619 -15.53067 -15.45282 -15.19339 -14.46557 -14.37001 -14.15890 -13.65751 -13.46158 -13.23057 -12.75284 -12.61222 -12.54388 -12.43241 -12.03304 -11.87937 -11.44311 -11.32059 -11.29896 -10.98110 -10.88446 -10.87379 -10.57229 -10.46041 -10.05786 -9.65774 -9.44048 -9.18639 -8.57192 -8.43837 -6.86765 -6.01815 -3.42120 0.60809 0.91080 1.68022 2.02769 2.93259 3.13476 3.16921 3.39773 3.43543 4.32077 4.44494 4.61725 4.63243 4.74418 4.88397 4.99650 5.10611 5.16853 5.29991 5.32830 5.48426 5.53506 5.69904 5.74132 5.77144 5.87220 6.12297 6.17289 6.20792 6.49912 6.63823 6.67080 7.09558 7.99464 8.35059 8.42342 8.92023 9.65910 10.04842 11.13753 Molecular weight = 319.05amu Principal moments of inertia in cm(-1) A = 0.014027 B = 0.003854 C = 0.003309 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1995.640967 B = 7263.568658 C = 8460.807663 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.124 3.876 2 N -0.600 5.600 3 C -0.254 4.254 4 H 0.079 0.921 5 C 0.035 3.965 6 N -0.895 5.895 7 Si 0.869 3.131 8 H -0.289 1.289 9 H -0.299 1.299 10 H -0.271 1.271 11 C 0.111 3.889 12 C 0.096 3.904 13 H 0.099 0.901 14 O -0.528 6.528 15 C 0.018 3.982 16 O -0.281 6.281 17 C 0.161 3.839 18 C -0.197 4.197 19 C 0.010 3.990 20 Cl -0.062 7.062 21 C -0.145 4.145 22 C -0.061 4.061 23 C -0.071 4.071 24 Cl -0.045 7.045 25 H 0.009 0.991 26 H 0.048 0.952 27 H 0.027 0.973 28 H 0.262 0.738 29 H 0.049 0.951 30 H 0.060 0.940 31 H 0.370 0.630 32 H 0.067 0.933 33 H 0.070 0.930 34 H 0.147 0.853 35 H 0.142 0.858 36 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.911 -21.291 -6.665 22.328 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.021 4.021 2 N -0.323 5.323 3 C -0.383 4.383 4 H 0.096 0.904 5 C -0.165 4.165 6 N -0.536 5.536 7 Si 0.699 3.301 8 H -0.217 1.217 9 H -0.227 1.227 10 H -0.195 1.195 11 C -0.016 4.016 12 C 0.032 3.968 13 H 0.117 0.883 14 O -0.332 6.332 15 C -0.058 4.058 16 O -0.193 6.193 17 C 0.112 3.888 18 C -0.217 4.217 19 C -0.017 4.017 20 Cl -0.032 7.032 21 C -0.165 4.165 22 C -0.079 4.079 23 C -0.099 4.099 24 Cl -0.016 7.016 25 H 0.027 0.973 26 H 0.067 0.933 27 H 0.046 0.954 28 H 0.072 0.928 29 H 0.067 0.933 30 H 0.077 0.923 31 H 0.217 0.783 32 H 0.085 0.915 33 H 0.088 0.912 34 H 0.165 0.835 35 H 0.160 0.840 36 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 0.426 -20.926 -7.144 22.116 hybrid contribution 0.889 -0.859 1.593 2.016 sum 1.315 -21.785 -5.551 22.519 Atomic orbital electron populations 1.21114 0.84138 0.99382 0.97497 1.43872 1.00844 1.01571 1.86008 1.18752 1.06064 0.90295 1.23184 0.90370 1.25424 0.96868 0.96493 0.97705 1.69900 1.08446 1.36007 1.39253 0.87081 0.77794 0.80013 0.85187 1.21745 1.22702 1.19539 1.21808 0.97549 0.89289 0.92972 1.22791 0.93729 0.82802 0.97442 0.88332 1.86629 1.28923 1.62327 1.55277 1.24129 1.01729 0.99052 0.80914 1.86369 1.74116 1.28428 1.30359 1.18679 0.92303 0.86112 0.91680 1.21139 1.05815 0.95204 0.99510 1.20713 0.99369 0.92763 0.88894 1.98390 1.88828 1.72835 1.43197 1.20858 1.04194 1.01610 0.89798 1.20847 0.95811 0.91404 0.99887 1.20308 1.07355 0.95152 0.87097 1.98395 1.89063 1.73224 1.40935 0.97275 0.93322 0.95445 0.92771 0.93307 0.92253 0.78348 0.91524 0.91226 0.83491 0.84007 0.83448 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.12 2.41 10.70 59.85 0.64 3.05 16 2 N -0.60 -13.84 2.45 -181.12 -0.44 -14.28 16 3 C -0.25 -6.94 9.38 -15.06 -0.14 -7.08 16 4 H 0.08 2.36 8.06 -52.49 -0.42 1.94 16 5 C 0.04 0.97 5.29 -17.43 -0.09 0.88 16 6 N -0.89 -26.40 13.97 55.49 0.78 -25.63 16 7 Si 0.87 21.06 25.10 -169.99 -4.27 16.79 16 8 H -0.29 -6.58 6.68 56.52 0.38 -6.20 16 9 H -0.30 -7.47 7.11 56.52 0.40 -7.07 16 10 H -0.27 -6.50 7.11 56.52 0.40 -6.10 16 11 C 0.11 2.20 4.21 -4.04 -0.02 2.19 16 12 C 0.10 1.72 3.49 -26.73 -0.09 1.63 16 13 H 0.10 1.80 8.14 -51.93 -0.42 1.38 16 14 O -0.53 -11.19 12.78 -40.08 -0.51 -11.70 16 15 C 0.02 0.26 4.37 37.16 0.16 0.42 16 16 O -0.28 -4.29 9.56 -24.37 -0.23 -4.52 16 17 C 0.16 2.13 6.68 -39.20 -0.26 1.87 16 18 C -0.20 -2.30 8.82 -39.40 -0.35 -2.65 16 19 C 0.01 0.10 6.32 -39.51 -0.25 -0.15 16 20 Cl -0.06 -0.60 28.95 -51.86 -1.50 -2.10 16 21 C -0.15 -1.29 9.83 -39.53 -0.39 -1.68 16 22 C -0.06 -0.56 9.82 -39.58 -0.39 -0.95 16 23 C -0.07 -0.86 6.33 -39.36 -0.25 -1.11 16 24 Cl -0.05 -0.57 28.50 -51.86 -1.48 -2.05 16 25 H 0.01 0.17 8.14 -51.93 -0.42 -0.25 16 26 H 0.05 0.94 8.00 -51.93 -0.42 0.53 16 27 H 0.03 0.45 8.10 -51.93 -0.42 0.03 16 28 H 0.26 7.34 8.31 -40.82 -0.34 7.00 16 29 H 0.05 0.84 8.07 -51.93 -0.42 0.42 16 30 H 0.06 1.27 3.38 -51.93 -0.18 1.10 16 31 H 0.37 7.37 9.05 45.56 0.41 7.79 16 32 H 0.07 0.92 7.65 -51.93 -0.40 0.52 16 33 H 0.07 0.85 7.67 -51.93 -0.40 0.45 16 34 H 0.15 1.61 6.30 -52.49 -0.33 1.28 16 35 H 0.14 0.92 8.06 -52.49 -0.42 0.49 16 36 H 0.15 0.98 8.06 -52.48 -0.42 0.55 16 LS Contribution 334.45 15.07 5.04 5.04 Total: -1.00 -30.72 334.45 -7.46 -38.18 By element: Atomic # 1 Polarization: 7.28 SS G_CDS: -3.42 Total: 3.86 kcal Atomic # 6 Polarization: -2.16 SS G_CDS: -1.43 Total: -3.59 kcal Atomic # 7 Polarization: -40.24 SS G_CDS: 0.33 Total: -39.91 kcal Atomic # 8 Polarization: -15.48 SS G_CDS: -0.75 Total: -16.22 kcal Atomic # 14 Polarization: 21.06 SS G_CDS: -4.27 Total: 16.79 kcal Atomic # 17 Polarization: -1.17 SS G_CDS: -2.98 Total: -4.15 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -30.72 -7.46 -38.18 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068971631.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.874 kcal (2) G-P(sol) polarization free energy of solvation -30.721 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.596 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.463 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.185 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.059 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds