Wall clock time and date at job start Tue Mar 31 2020 12:52:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 C 1.53001 * 109.47237 * 2 1 4 4 O 1.42897 * 109.47323 * 179.97438 * 3 2 1 5 5 C 1.35715 * 117.00099 * 179.97438 * 4 3 2 6 6 C 1.38727 * 119.60868 * 179.97438 * 5 4 3 7 7 C 1.39533 * 118.97665 * 180.02562 * 6 5 4 8 8 C 1.48347 * 120.88236 * 179.97438 * 7 6 5 9 9 C 1.39977 * 119.98117 * 359.97438 * 8 7 6 10 10 N 1.32197 * 120.29825 * 180.02562 * 9 8 7 11 11 C 1.31876 * 120.27991 * 359.72454 * 10 9 8 12 12 C 1.40839 * 119.95021 * 0.55188 * 11 10 9 13 13 C 1.41350 * 120.14494 * 179.73146 * 12 11 10 14 14 H 1.08007 * 119.99855 * 204.94283 * 13 12 11 15 15 C 1.40046 * 120.00365 * 24.94272 * 13 12 11 16 16 N 1.30735 * 119.99589 * 17.49026 * 15 13 12 17 17 Si 1.86796 * 120.00670 * 197.49193 * 15 13 12 18 18 H 1.48498 * 109.47108 * 265.18539 * 17 15 13 19 19 H 1.48505 * 109.46576 * 25.18104 * 17 15 13 20 20 H 1.48500 * 109.47238 * 145.18091 * 17 15 13 21 21 N 1.32508 * 119.97784 * 179.97438 * 8 7 6 22 22 C 1.40021 * 118.23353 * 0.24789 * 7 6 5 23 23 Cl 1.73599 * 120.44242 * 179.75243 * 22 7 6 24 24 C 1.37991 * 119.11675 * 359.52575 * 22 7 6 25 25 N 1.31991 * 120.93821 * 0.49072 * 24 22 7 26 26 H 1.08999 * 109.47492 * 300.00219 * 1 2 3 27 27 H 1.09006 * 109.46939 * 60.00280 * 1 2 3 28 28 H 1.09004 * 109.47542 * 179.97438 * 1 2 3 29 29 H 1.08999 * 109.47492 * 239.99781 * 2 1 3 30 30 H 1.09004 * 109.47231 * 119.99272 * 2 1 3 31 31 H 1.09002 * 109.47550 * 59.99598 * 3 2 1 32 32 H 1.09006 * 109.46927 * 299.99727 * 3 2 1 33 33 H 1.08001 * 120.51360 * 0.02585 * 6 5 4 34 34 H 1.08003 * 119.85380 * 0.02562 * 9 8 7 35 35 H 1.07992 * 120.02601 * 180.25888 * 11 10 9 36 36 H 0.97000 * 120.00100 * 179.97438 * 16 15 13 37 37 H 1.07997 * 119.53436 * 180.20206 * 24 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 8 3.4689 1.4425 0.0006 5 6 4.0851 2.6517 0.0001 6 6 5.4709 2.7149 0.0012 7 6 6.0906 3.9650 0.0013 8 6 7.5695 4.0818 0.0030 9 6 8.3622 2.9281 0.0051 10 7 9.6806 3.0249 0.0072 11 6 10.2605 4.2093 0.0017 12 6 9.4736 5.3774 0.0055 13 6 10.0908 6.6491 0.0054 14 1 9.5647 7.5047 0.4025 15 6 11.3845 6.7996 -0.5095 16 7 11.8898 5.8781 -1.2871 17 14 12.3880 8.3169 -0.0852 18 1 12.2224 9.3346 -1.1539 19 1 11.9177 8.8757 1.2077 20 1 13.8217 7.9465 0.0278 21 7 8.1392 5.2782 0.0025 22 6 5.2795 5.1064 0.0056 23 17 5.9900 6.6903 0.0123 24 6 3.9079 4.9555 -0.0004 25 7 3.3572 3.7559 -0.0004 26 1 -0.3634 0.5138 0.8899 27 1 -0.3633 0.5138 -0.8901 28 1 -0.3634 -1.0277 -0.0005 29 1 1.8933 -0.5138 -0.8899 30 1 1.8933 -0.5137 0.8901 31 1 1.6766 1.9564 0.8899 32 1 1.6766 1.9563 -0.8901 33 1 6.0610 1.8104 0.0020 34 1 7.8947 1.9546 0.0051 35 1 11.3378 4.2836 -0.0008 36 1 12.7856 5.9825 -1.6440 37 1 3.2760 5.8312 -0.0005 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001244606118.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:52:54 Heat of formation + Delta-G solvation = 23.321782 kcal Electronic energy + Delta-G solvation = -23068.697375 eV Core-core repulsion = 19450.980117 eV Total energy + Delta-G solvation = -3617.717258 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 319.083 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -40.56204 -39.17789 -37.98634 -35.79711 -34.40110 -34.08857 -33.34804 -32.16494 -30.08076 -29.37897 -26.81239 -26.19617 -24.31348 -23.36936 -21.95974 -21.69491 -21.17989 -18.48784 -17.31814 -16.97764 -16.48422 -16.33757 -15.79516 -15.28782 -14.99151 -14.68728 -14.52919 -14.38024 -13.73713 -13.61603 -13.04706 -12.95949 -12.82254 -12.37374 -12.22355 -11.88515 -11.74452 -11.45783 -11.31269 -11.23210 -11.15636 -11.02205 -10.81936 -10.57325 -10.53401 -10.14891 -9.75941 -9.71408 -9.38997 -9.08343 -8.18648 -7.72291 -7.37198 -7.12966 -4.78871 0.94556 1.21144 2.44514 2.66270 2.80016 2.95058 2.98823 3.01978 3.05255 3.72806 3.87251 4.31815 4.39627 4.66487 4.70894 4.78762 4.91259 5.09867 5.16220 5.26826 5.39303 5.42373 5.52826 5.60461 5.69886 5.75730 5.84344 5.84448 5.92614 6.02568 6.23663 6.28937 6.51185 6.83928 6.88864 7.08980 7.26155 7.48349 7.84433 8.05687 8.33223 8.38265 9.01051 9.48502 9.85999 Molecular weight = 319.08amu Principal moments of inertia in cm(-1) A = 0.026708 B = 0.003054 C = 0.002767 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1048.139243 B = 9167.549999 C =10117.232794 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.126 4.126 3 C 0.071 3.929 4 O -0.306 6.306 5 C 0.318 3.682 6 C -0.171 4.171 7 C 0.070 3.930 8 C 0.110 3.890 9 C -0.072 4.072 10 N -0.445 5.445 11 C 0.026 3.974 12 C 0.223 3.777 13 C -0.416 4.416 14 H 0.092 0.908 15 C 0.074 3.926 16 N -0.782 5.782 17 Si 0.923 3.077 18 H -0.267 1.267 19 H -0.256 1.256 20 H -0.272 1.272 21 N -0.487 5.487 22 C -0.104 4.104 23 Cl -0.010 7.010 24 C 0.140 3.860 25 N -0.535 5.535 26 H 0.057 0.943 27 H 0.057 0.943 28 H 0.062 0.938 29 H 0.072 0.928 30 H 0.072 0.928 31 H 0.065 0.935 32 H 0.065 0.935 33 H 0.151 0.849 34 H 0.133 0.867 35 H 0.161 0.839 36 H 0.290 0.710 37 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.921 -4.206 1.691 14.640 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.164 4.164 3 C -0.005 4.005 4 O -0.213 6.213 5 C 0.139 3.861 6 C -0.192 4.192 7 C 0.060 3.940 8 C -0.033 4.033 9 C -0.229 4.229 10 N -0.156 5.156 11 C -0.146 4.146 12 C 0.094 3.906 13 C -0.449 4.449 14 H 0.110 0.890 15 C -0.147 4.147 16 N -0.408 5.408 17 Si 0.747 3.253 18 H -0.192 1.192 19 H -0.180 1.180 20 H -0.196 1.196 21 N -0.205 5.205 22 C -0.134 4.134 23 Cl 0.019 6.981 24 C -0.016 4.016 25 N -0.260 5.260 26 H 0.076 0.924 27 H 0.076 0.924 28 H 0.081 0.919 29 H 0.091 0.909 30 H 0.091 0.909 31 H 0.083 0.917 32 H 0.083 0.917 33 H 0.169 0.831 34 H 0.150 0.850 35 H 0.178 0.822 36 H 0.101 0.899 37 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges -14.496 -4.515 1.554 15.262 hybrid contribution 1.251 0.883 -0.049 1.532 sum -13.246 -3.631 1.505 13.817 Atomic orbital electron populations 1.21668 0.94315 1.02264 1.02283 1.21530 0.96055 0.95222 1.03552 1.22669 0.77596 0.97703 1.02500 1.86213 1.22551 1.24489 1.88068 1.19533 0.88929 0.84477 0.93127 1.21059 0.91642 0.98637 1.07909 1.18763 0.92580 0.90551 0.92068 1.20039 0.90577 0.92288 1.00357 1.22636 0.90547 0.97006 1.12731 1.67971 1.10501 1.28350 1.08779 1.23971 1.01468 0.87651 1.01513 1.19415 0.87292 0.94998 0.88902 1.19337 0.97611 0.94384 1.33589 0.89035 1.26047 0.97666 0.98765 0.92218 1.69712 1.16756 1.33696 1.20602 0.86033 0.78539 0.80366 0.80412 1.19195 1.18000 1.19633 1.69424 1.11539 1.22310 1.17237 1.22021 0.93496 0.89684 1.08248 1.98412 1.83375 1.20045 1.96262 1.22236 0.90693 0.94038 0.94634 1.67292 1.40192 0.98298 1.20206 0.92358 0.92360 0.91899 0.90942 0.90950 0.91685 0.91672 0.83129 0.84978 0.82165 0.89894 0.81783 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.98 9.91 37.15 0.37 -0.61 16 2 C -0.13 -1.07 6.30 -26.73 -0.17 -1.24 16 3 C 0.07 0.78 5.31 37.16 0.20 0.98 16 4 O -0.31 -4.32 10.11 -18.85 -0.19 -4.51 16 5 C 0.32 5.01 7.48 -17.19 -0.13 4.89 16 6 C -0.17 -2.87 9.43 -38.92 -0.37 -3.24 16 7 C 0.07 1.35 5.91 -104.59 -0.62 0.73 16 8 C 0.11 2.51 6.74 -82.76 -0.56 1.95 16 9 C -0.07 -1.63 10.64 -16.74 -0.18 -1.81 16 10 N -0.44 -11.03 10.47 -12.06 -0.13 -11.16 16 11 C 0.03 0.66 9.88 -16.55 -0.16 0.49 16 12 C 0.22 5.81 6.41 -84.84 -0.54 5.27 16 13 C -0.42 -10.44 9.29 -37.72 -0.35 -10.79 16 14 H 0.09 2.26 7.91 -52.48 -0.41 1.84 16 15 C 0.07 1.72 5.14 -17.34 -0.09 1.63 16 16 N -0.78 -18.69 10.96 55.55 0.61 -18.08 16 17 Si 0.92 17.28 29.59 -169.99 -5.03 12.25 16 18 H -0.27 -4.97 7.11 56.52 0.40 -4.56 16 19 H -0.26 -4.79 7.11 56.52 0.40 -4.39 16 20 H -0.27 -4.93 7.11 56.52 0.40 -4.52 16 21 N -0.49 -12.07 7.16 -7.50 -0.05 -12.13 16 22 C -0.10 -1.86 6.37 -39.00 -0.25 -2.11 16 23 Cl -0.01 -0.19 25.90 -51.86 -1.34 -1.53 16 24 C 0.14 2.12 10.97 -17.57 -0.19 1.92 16 25 N -0.54 -8.24 9.19 -13.38 -0.12 -8.36 16 26 H 0.06 0.37 8.14 -51.93 -0.42 -0.06 16 27 H 0.06 0.37 8.14 -51.93 -0.42 -0.05 16 28 H 0.06 0.35 8.14 -51.93 -0.42 -0.07 16 29 H 0.07 0.61 8.14 -51.93 -0.42 0.19 16 30 H 0.07 0.61 8.14 -51.93 -0.42 0.18 16 31 H 0.06 0.71 8.10 -51.93 -0.42 0.29 16 32 H 0.06 0.72 8.10 -51.93 -0.42 0.30 16 33 H 0.15 2.31 6.32 -52.49 -0.33 1.98 16 34 H 0.13 2.56 6.28 -52.48 -0.33 2.23 16 35 H 0.16 4.12 6.17 -52.49 -0.32 3.79 16 36 H 0.29 6.20 8.29 -40.82 -0.34 5.86 16 37 H 0.17 1.97 8.06 -52.49 -0.42 1.55 16 LS Contribution 334.42 15.07 5.04 5.04 Total: -1.00 -27.67 334.42 -8.17 -35.84 By element: Atomic # 1 Polarization: 8.48 SS G_CDS: -3.91 Total: 4.57 kcal Atomic # 6 Polarization: 1.11 SS G_CDS: -3.04 Total: -1.93 kcal Atomic # 7 Polarization: -50.03 SS G_CDS: 0.31 Total: -49.73 kcal Atomic # 8 Polarization: -4.32 SS G_CDS: -0.19 Total: -4.51 kcal Atomic # 14 Polarization: 17.28 SS G_CDS: -5.03 Total: 12.25 kcal Atomic # 17 Polarization: -0.19 SS G_CDS: -1.34 Total: -1.53 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -27.67 -8.17 -35.84 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001244606118.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 59.166 kcal (2) G-P(sol) polarization free energy of solvation -27.673 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.493 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.171 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.844 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.322 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds