Wall clock time and date at job start Tue Mar 31 2020 12:07:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.50701 * 109.63938 * 2 1 4 4 O 1.21283 * 119.99736 * 119.57683 * 3 2 1 5 5 N 1.34771 * 120.00116 * 299.57186 * 3 2 1 6 6 C 1.39266 * 120.00374 * 174.43384 * 5 3 2 7 7 C 1.39473 * 119.83684 * 335.09432 * 6 5 3 8 8 C 1.36364 * 120.18181 * 179.97438 * 7 6 5 9 9 C 1.40901 * 119.84935 * 359.97438 * 8 7 6 10 10 C 1.41145 * 120.15845 * 179.97438 * 9 8 7 11 11 H 1.07997 * 120.00119 * 34.93385 * 10 9 8 12 12 C 1.39904 * 119.99962 * 214.92699 * 10 9 8 13 13 N 1.30874 * 119.99875 * 355.19417 * 12 10 9 14 14 Si 1.86795 * 119.99923 * 175.19623 * 12 10 9 15 15 H 1.48492 * 109.47283 * 359.97438 * 14 12 10 16 16 H 1.48503 * 109.47073 * 119.99962 * 14 12 10 17 17 H 1.48506 * 109.46924 * 239.99953 * 14 12 10 18 18 C 1.40842 * 119.68067 * 0.02562 * 9 8 7 19 19 C 1.36477 * 119.81735 * 359.72381 * 18 9 8 20 20 Cl 1.73601 * 119.92652 * 180.29157 * 19 18 9 21 21 C 1.53022 * 109.64431 * 239.57208 * 2 1 3 22 22 C 1.50058 * 110.15164 * 289.54646 * 21 2 1 23 23 C 1.29451 * 124.07463 * 342.86477 * 22 21 2 24 24 C 1.50070 * 124.07405 * 0.49555 * 23 22 21 25 25 C 1.53035 * 110.14055 * 342.83032 * 24 23 22 26 26 H 1.09004 * 109.46879 * 60.00218 * 1 2 3 27 27 H 1.08997 * 109.47305 * 179.97438 * 1 2 3 28 28 H 1.08998 * 109.47480 * 300.00657 * 1 2 3 29 29 H 0.97005 * 119.99607 * 354.43328 * 5 3 2 30 30 H 1.08003 * 119.90900 * 0.02562 * 7 6 5 31 31 H 1.07997 * 120.07835 * 179.97438 * 8 7 6 32 32 H 0.97000 * 119.99535 * 180.02562 * 13 12 10 33 33 H 1.08001 * 120.09028 * 180.02562 * 18 9 8 34 34 H 1.09002 * 109.35406 * 49.75583 * 21 2 1 35 35 H 1.08998 * 109.35692 * 169.47029 * 21 2 1 36 36 H 1.08001 * 117.96404 * 162.88966 * 22 21 2 37 37 H 1.07996 * 117.95903 * 180.46968 * 23 22 21 38 38 H 1.08993 * 109.35650 * 103.05134 * 24 23 22 39 39 H 1.09001 * 109.35231 * 222.63499 * 24 23 22 40 40 H 1.09003 * 109.65853 * 289.78142 * 25 24 23 41 41 H 1.08997 * 109.63532 * 169.14034 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0365 1.4193 0.0000 4 8 2.7286 1.8162 0.9135 5 7 1.7205 2.2476 -1.0151 6 6 2.0898 3.5893 -0.9599 7 6 2.2976 4.2015 0.2759 8 6 2.6598 5.5147 0.3381 9 6 2.8247 6.2538 -0.8501 10 6 3.1990 7.6135 -0.7933 11 1 3.8728 7.9564 -0.0220 12 6 2.6971 8.5171 -1.7361 13 7 1.9568 8.0866 -2.7257 14 14 3.0839 10.3382 -1.5825 15 1 3.9331 10.5646 -0.3856 16 1 3.8070 10.7948 -2.7966 17 1 1.8185 11.1029 -1.4430 18 6 2.6133 5.6294 -2.0947 19 6 2.2561 4.3131 -2.1417 20 17 2.0021 3.5387 -3.6745 21 6 2.0444 -0.7299 -1.2427 22 6 1.7743 -2.2014 -1.1268 23 6 1.4896 -2.8012 -0.0155 24 6 1.3793 -2.1070 1.3104 25 6 2.0499 -0.7330 1.2432 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3634 0.5139 0.8899 29 1 1.2358 1.9092 -1.7842 30 1 2.1721 3.6338 1.1861 31 1 2.8199 5.9872 1.2960 32 1 1.6092 8.7131 -3.3796 33 1 2.7382 6.1896 -3.0097 34 1 1.5401 -0.3384 -2.1262 35 1 3.1181 -0.5680 -1.3381 36 1 1.8208 -2.7972 -2.0264 37 1 1.3204 -3.8674 -0.0445 38 1 0.3272 -1.9837 1.5672 39 1 1.8676 -2.7103 2.0757 40 1 3.1306 -0.8556 1.1710 41 1 1.8018 -0.1603 2.1368 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000334645698.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:07:57 Heat of formation + Delta-G solvation = -21.611735 kcal Electronic energy + Delta-G solvation = -24254.521669 eV Core-core repulsion = 20738.396291 eV Total energy + Delta-G solvation = -3516.125378 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 319.108 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -40.62396 -38.54750 -37.16646 -35.54779 -34.50809 -33.20468 -32.24579 -30.92184 -29.45726 -28.91974 -27.22896 -25.35047 -23.63490 -22.73750 -21.61481 -20.71315 -19.39621 -17.70755 -17.34797 -17.16008 -16.39935 -15.56449 -15.35058 -14.77921 -14.68561 -14.25681 -14.17791 -13.56952 -13.51516 -13.10702 -12.97826 -12.80803 -12.61040 -12.35198 -12.20543 -11.98236 -11.71557 -11.68598 -11.40877 -11.12381 -11.02613 -10.90791 -10.72842 -10.50116 -10.37831 -10.32405 -10.08131 -9.89010 -9.47466 -9.17293 -9.14213 -8.79965 -7.56948 -6.97650 -6.72879 -4.45662 2.13784 2.32804 2.82074 2.96520 3.05984 3.10992 3.13046 3.29259 3.64386 3.91023 4.46464 4.54972 4.56177 4.77470 5.03162 5.10419 5.14088 5.23583 5.37763 5.45299 5.48959 5.54582 5.73484 5.77457 5.81514 5.89227 6.01144 6.16173 6.19548 6.26666 6.50376 6.51631 6.61898 6.78870 6.86821 7.00452 7.14321 7.31071 7.56515 7.65268 7.87249 8.08195 8.14971 8.43018 8.65479 8.78192 8.81456 10.17929 Molecular weight = 319.11amu Principal moments of inertia in cm(-1) A = 0.027211 B = 0.003236 C = 0.002980 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1028.759544 B = 8651.507732 C = 9392.750661 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.076 4.076 3 C 0.511 3.489 4 O -0.529 6.529 5 N -0.646 5.646 6 C 0.019 3.981 7 C -0.086 4.086 8 C -0.198 4.198 9 C 0.105 3.895 10 C -0.456 4.456 11 H 0.081 0.919 12 C 0.069 3.931 13 N -0.806 5.806 14 Si 0.918 3.082 15 H -0.261 1.261 16 H -0.274 1.274 17 H -0.274 1.274 18 C -0.133 4.133 19 C -0.027 4.027 20 Cl -0.121 7.121 21 C -0.082 4.082 22 C -0.148 4.148 23 C -0.157 4.157 24 C -0.093 4.093 25 C -0.094 4.094 26 H 0.059 0.941 27 H 0.071 0.929 28 H 0.061 0.939 29 H 0.398 0.602 30 H 0.125 0.875 31 H 0.103 0.897 32 H 0.280 0.720 33 H 0.145 0.855 34 H 0.077 0.923 35 H 0.080 0.920 36 H 0.105 0.895 37 H 0.101 0.899 38 H 0.076 0.924 39 H 0.072 0.928 40 H 0.070 0.930 41 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.561 -15.374 1.290 15.834 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C -0.079 4.079 3 C 0.298 3.702 4 O -0.406 6.406 5 N -0.289 5.289 6 C -0.075 4.075 7 C -0.106 4.106 8 C -0.218 4.218 9 C 0.102 3.898 10 C -0.486 4.486 11 H 0.099 0.901 12 C -0.147 4.147 13 N -0.433 5.433 14 Si 0.743 3.257 15 H -0.185 1.185 16 H -0.199 1.199 17 H -0.199 1.199 18 C -0.153 4.153 19 C -0.055 4.055 20 Cl -0.092 7.092 21 C -0.119 4.119 22 C -0.166 4.166 23 C -0.175 4.175 24 C -0.129 4.129 25 C -0.131 4.131 26 H 0.078 0.922 27 H 0.090 0.910 28 H 0.080 0.920 29 H 0.233 0.767 30 H 0.143 0.857 31 H 0.121 0.879 32 H 0.091 0.909 33 H 0.162 0.838 34 H 0.095 0.905 35 H 0.098 0.902 36 H 0.123 0.877 37 H 0.119 0.881 38 H 0.094 0.906 39 H 0.090 0.910 40 H 0.088 0.912 41 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -3.235 -15.088 1.607 15.515 hybrid contribution -0.247 0.561 -0.747 0.966 sum -3.483 -14.527 0.861 14.964 Atomic orbital electron populations 1.21905 0.92506 1.02879 1.02589 1.20823 0.97234 0.92080 0.97771 1.20395 0.80415 0.86828 0.82593 1.90637 1.37227 1.76611 1.36103 1.43039 1.55974 1.08108 1.21755 1.16996 1.14757 0.83087 0.92640 1.20524 1.00212 0.94657 0.95199 1.20934 1.08833 0.94269 0.97771 1.17610 0.89450 0.92979 0.89790 1.19530 1.25285 0.92270 1.11534 0.90106 1.25922 0.93325 1.01793 0.93651 1.69746 1.26153 1.36852 1.10520 0.86098 0.79057 0.81319 0.79276 1.18485 1.19886 1.19893 1.21213 1.03426 0.90175 1.00508 1.20399 1.08556 0.94526 0.82065 1.98248 1.95829 1.82185 1.32980 1.20518 1.01878 0.92814 0.96686 1.21968 1.00866 0.95786 0.98009 1.22051 1.01420 0.99386 0.94662 1.20536 1.01262 0.95725 0.95413 1.21433 1.00537 0.94490 0.96680 0.92186 0.91021 0.91967 0.76661 0.85716 0.87889 0.90886 0.83803 0.90490 0.90178 0.87746 0.88058 0.90594 0.90956 0.91152 0.90587 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.53 7.74 37.16 0.29 -1.24 16 2 C -0.08 -0.95 0.63 -155.44 -0.10 -1.05 16 3 C 0.51 8.71 6.26 -10.99 -0.07 8.64 16 4 O -0.53 -10.87 13.03 5.55 0.07 -10.79 16 5 N -0.65 -11.52 4.95 -9.71 -0.05 -11.57 16 6 C 0.02 0.42 6.44 -83.52 -0.54 -0.12 16 7 C -0.09 -1.99 8.64 -39.80 -0.34 -2.33 16 8 C -0.20 -4.80 9.74 -39.25 -0.38 -5.18 16 9 C 0.10 2.71 5.55 -106.80 -0.59 2.12 16 10 C -0.46 -11.72 9.02 -37.86 -0.34 -12.06 16 11 H 0.08 2.00 7.85 -52.49 -0.41 1.59 16 12 C 0.07 1.69 5.42 -17.34 -0.09 1.59 16 13 N -0.81 -20.27 10.59 55.55 0.59 -19.68 16 14 Si 0.92 18.43 29.56 -169.99 -5.03 13.40 16 15 H -0.26 -5.19 7.11 56.52 0.40 -4.79 16 16 H -0.27 -5.41 7.11 56.52 0.40 -5.00 16 17 H -0.27 -5.45 7.11 56.52 0.40 -5.04 16 18 C -0.13 -3.34 8.38 -39.23 -0.33 -3.67 16 19 C -0.03 -0.62 6.30 -39.72 -0.25 -0.87 16 20 Cl -0.12 -2.30 27.75 -51.86 -1.44 -3.74 16 21 C -0.08 -0.90 4.68 -28.18 -0.13 -1.04 16 22 C -0.15 -1.39 9.41 -35.91 -0.34 -1.73 16 23 C -0.16 -1.39 9.16 -35.90 -0.33 -1.72 16 24 C -0.09 -0.84 5.48 -28.17 -0.15 -0.99 16 25 C -0.09 -1.11 4.34 -26.51 -0.11 -1.23 16 26 H 0.06 0.63 7.74 -51.93 -0.40 0.23 16 27 H 0.07 0.66 5.72 -51.93 -0.30 0.36 16 28 H 0.06 0.70 8.14 -51.93 -0.42 0.27 16 29 H 0.40 6.20 6.90 -40.82 -0.28 5.92 16 30 H 0.13 2.84 5.76 -52.48 -0.30 2.53 16 31 H 0.10 2.34 8.06 -52.49 -0.42 1.92 16 32 H 0.28 6.45 8.30 -40.82 -0.34 6.11 16 33 H 0.14 3.79 6.13 -52.49 -0.32 3.47 16 34 H 0.08 0.79 7.76 -51.93 -0.40 0.39 16 35 H 0.08 0.97 8.10 -51.93 -0.42 0.55 16 36 H 0.10 0.84 8.06 -52.49 -0.42 0.42 16 37 H 0.10 0.75 8.06 -52.49 -0.42 0.32 16 38 H 0.08 0.63 6.93 -51.93 -0.36 0.27 16 39 H 0.07 0.58 8.14 -51.93 -0.42 0.16 16 40 H 0.07 0.90 8.12 -51.93 -0.42 0.48 16 41 H 0.08 0.97 7.89 -51.93 -0.41 0.56 16 LS Contribution 342.05 15.07 5.15 5.15 Total: -1.00 -27.59 342.05 -9.80 -37.38 By element: Atomic # 1 Polarization: 15.99 SS G_CDS: -5.28 Total: 10.71 kcal Atomic # 6 Polarization: -17.05 SS G_CDS: -3.82 Total: -20.87 kcal Atomic # 7 Polarization: -31.79 SS G_CDS: 0.54 Total: -31.25 kcal Atomic # 8 Polarization: -10.87 SS G_CDS: 0.07 Total: -10.79 kcal Atomic # 14 Polarization: 18.43 SS G_CDS: -5.03 Total: 13.40 kcal Atomic # 17 Polarization: -2.30 SS G_CDS: -1.44 Total: -3.74 kcal Total LS contribution 5.15 Total: 5.15 kcal Total: -27.59 -9.80 -37.38 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000334645698.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.773 kcal (2) G-P(sol) polarization free energy of solvation -27.589 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.816 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.796 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.385 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.612 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds