Wall clock time and date at job start Tue Mar 31 2020 12:30:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17396 * 1 3 3 C 1.47206 * 179.97438 * 2 1 4 4 C 1.53119 * 109.51929 * 310.92619 * 3 2 1 5 5 C 1.53039 * 109.27504 * 177.56114 * 4 3 2 6 6 N 1.46848 * 109.52278 * 300.81882 * 5 4 3 7 7 C 1.46904 * 111.00019 * 185.83636 * 6 5 4 8 8 C 1.50690 * 109.47090 * 174.56855 * 7 6 5 9 9 C 1.38112 * 120.03054 * 266.30188 * 8 7 6 10 10 C 1.38391 * 120.05596 * 179.97438 * 9 8 7 11 11 Cl 1.73601 * 119.94450 * 179.97438 * 10 9 8 12 12 C 1.38433 * 120.11095 * 0.02562 * 10 9 8 13 13 C 1.38067 * 120.05809 * 359.73515 * 12 10 9 14 14 C 1.38856 * 120.02931 * 86.28369 * 8 7 6 15 15 O 1.35771 * 120.05443 * 359.97438 * 14 8 7 16 16 C 1.34825 * 117.00005 * 174.96333 * 15 14 8 17 17 H 1.07998 * 119.99730 * 5.23540 * 16 15 14 18 18 C 1.38652 * 119.99612 * 184.95816 * 16 15 14 19 19 N 1.31557 * 119.99753 * 176.23538 * 18 16 15 20 20 Si 1.86805 * 120.00150 * 356.23404 * 18 16 15 21 21 H 1.48502 * 109.47013 * 94.89674 * 20 18 16 22 22 H 1.48499 * 109.46867 * 214.89906 * 20 18 16 23 23 H 1.48505 * 109.46964 * 334.89442 * 20 18 16 24 24 C 1.46853 * 111.19378 * 61.74619 * 6 5 4 25 25 C 1.53030 * 109.52108 * 298.25244 * 24 6 5 26 26 H 4.44828 * 5.62948 * 180.02562 * 4 1 2 27 27 H 1.08999 * 109.52156 * 190.80398 * 3 2 1 28 28 H 1.09004 * 109.50526 * 57.62165 * 4 3 2 29 29 H 1.08999 * 109.53948 * 297.51965 * 4 3 2 30 30 H 1.09005 * 109.46218 * 180.80938 * 5 4 3 31 31 H 1.08990 * 109.45449 * 60.83439 * 5 4 3 32 32 H 1.09004 * 109.46754 * 54.56933 * 7 6 5 33 33 H 1.08998 * 109.47601 * 294.57731 * 7 6 5 34 34 H 1.08000 * 119.97131 * 359.97438 * 9 8 7 35 35 H 1.08003 * 119.96693 * 179.97438 * 12 10 9 36 36 H 1.07997 * 120.02758 * 180.26157 * 13 12 10 37 37 H 0.96997 * 119.99905 * 179.97438 * 19 18 16 38 38 H 1.08997 * 109.46037 * 58.27246 * 24 6 5 39 39 H 1.09005 * 109.45592 * 178.23658 * 24 6 5 40 40 H 1.09002 * 109.50478 * 299.24002 * 25 24 6 41 41 H 1.09003 * 109.53254 * 179.14254 * 25 24 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 6 3.1581 -0.9445 1.0904 5 6 4.6872 -0.9863 1.0455 6 7 5.1269 -1.4511 -0.2762 7 6 6.5838 -1.6359 -0.3115 8 6 6.9819 -2.2379 -1.6344 9 6 7.1108 -3.6072 -1.7598 10 6 7.4758 -4.1607 -2.9746 11 17 7.6376 -5.8822 -3.1289 12 6 7.7131 -3.3437 -4.0667 13 6 7.5809 -1.9745 -3.9478 14 6 7.2191 -1.4163 -2.7284 15 8 7.0922 -0.0699 -2.6079 16 6 7.4374 0.6755 -3.6770 17 1 7.7149 0.1949 -4.6035 18 6 7.4307 2.0592 -3.5885 19 7 7.8382 2.7854 -4.6070 20 14 6.8428 2.8922 -2.0232 21 1 8.0093 3.1942 -1.1552 22 1 6.1421 4.1553 -2.3679 23 1 5.9098 1.9894 -1.3024 24 6 4.6871 -0.5335 -1.3350 25 6 3.1580 -0.4782 -1.3612 26 1 -1.0499 -0.0002 0.0000 27 1 3.0098 1.0099 0.1926 28 1 2.7615 -1.9455 0.9201 29 1 2.8323 -0.5853 2.0666 30 1 5.0545 -1.6695 1.8114 31 1 5.0832 0.0123 1.2296 32 1 6.8851 -2.3027 0.4965 33 1 7.0756 -0.6710 -0.1886 34 1 6.9265 -4.2467 -0.9092 35 1 7.9983 -3.7780 -5.0135 36 1 7.7620 -1.3379 -4.8011 37 1 7.8332 3.7534 -4.5453 38 1 5.0833 0.4630 -1.1397 39 1 5.0543 -0.8878 -2.2983 40 1 2.7614 -1.4718 -1.5702 41 1 2.8316 0.2144 -2.1370 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000830326458.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:30:37 Heat of formation + Delta-G solvation = 42.693478 kcal Electronic energy + Delta-G solvation = -24764.542427 eV Core-core repulsion = 21251.205532 eV Total energy + Delta-G solvation = -3513.336895 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 319.108 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -39.91937 -38.58632 -37.01954 -35.74128 -34.81460 -32.56034 -32.05360 -30.71877 -30.25086 -29.03834 -26.21803 -25.34371 -23.36430 -22.98926 -21.60616 -20.71400 -19.76794 -18.10906 -18.05873 -17.35152 -15.91274 -15.53942 -15.36954 -14.73766 -14.53937 -14.51616 -14.13995 -13.97699 -13.82091 -13.57925 -13.16578 -12.71979 -12.50712 -12.47324 -12.30724 -12.04818 -11.84575 -11.42160 -11.24048 -11.17183 -11.03837 -10.98923 -10.77784 -10.64733 -10.48140 -10.39591 -10.11094 -9.94274 -9.79656 -9.54035 -8.97683 -8.42367 -7.92133 -7.41111 -6.56659 -4.22863 1.83575 1.94763 2.73062 2.84888 2.87396 3.08384 3.13984 3.21120 4.03766 4.07324 4.31829 4.45999 4.61521 4.92157 4.96317 5.04058 5.20502 5.23576 5.39864 5.47299 5.58058 5.62700 5.67777 5.73323 5.77658 5.86808 5.94998 6.04448 6.08031 6.12622 6.17640 6.27067 6.28048 6.51985 6.53593 6.61112 6.80166 6.84466 7.01845 7.32029 7.39323 7.43319 7.61839 7.64514 7.85841 8.77821 9.35401 10.50315 Molecular weight = 319.11amu Principal moments of inertia in cm(-1) A = 0.008337 B = 0.006063 C = 0.003942 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3357.812774 B = 4617.128303 C = 7101.175821 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.225 4.225 2 C -0.166 4.166 3 C 0.014 3.986 4 C -0.102 4.102 5 C 0.054 3.946 6 N -0.532 5.532 7 C 0.112 3.888 8 C -0.144 4.144 9 C -0.046 4.046 10 C -0.116 4.116 11 Cl -0.103 7.103 12 C -0.061 4.061 13 C -0.213 4.213 14 C 0.167 3.833 15 O -0.204 6.204 16 C -0.391 4.391 17 H 0.108 0.892 18 C 0.069 3.931 19 N -0.872 5.872 20 Si 0.892 3.108 21 H -0.275 1.275 22 H -0.282 1.282 23 H -0.246 1.246 24 C 0.046 3.954 25 C -0.105 4.105 26 H 0.215 0.785 27 H 0.087 0.913 28 H 0.074 0.926 29 H 0.066 0.934 30 H 0.075 0.925 31 H 0.033 0.967 32 H 0.076 0.924 33 H 0.046 0.954 34 H 0.124 0.876 35 H 0.120 0.880 36 H 0.142 0.858 37 H 0.281 0.719 38 H 0.053 0.947 39 H 0.092 0.908 40 H 0.071 0.929 41 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.613 -7.603 8.798 13.377 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.242 4.242 2 C -0.166 4.166 3 C -0.004 4.004 4 C -0.140 4.140 5 C -0.074 4.074 6 N -0.257 5.257 7 C -0.015 4.015 8 C -0.146 4.146 9 C -0.065 4.065 10 C -0.143 4.143 11 Cl -0.075 7.075 12 C -0.081 4.081 13 C -0.232 4.232 14 C 0.114 3.886 15 O -0.108 6.108 16 C -0.466 4.466 17 H 0.125 0.875 18 C -0.135 4.135 19 N -0.508 5.508 20 Si 0.718 3.282 21 H -0.201 1.201 22 H -0.207 1.207 23 H -0.171 1.171 24 C -0.081 4.081 25 C -0.143 4.143 26 H 0.232 0.768 27 H 0.105 0.895 28 H 0.093 0.907 29 H 0.085 0.915 30 H 0.094 0.906 31 H 0.051 0.949 32 H 0.094 0.906 33 H 0.064 0.936 34 H 0.142 0.858 35 H 0.138 0.862 36 H 0.159 0.841 37 H 0.091 0.909 38 H 0.071 0.929 39 H 0.110 0.890 40 H 0.090 0.910 41 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -6.846 -7.795 8.792 13.599 hybrid contribution 0.019 1.172 0.383 1.233 sum -6.827 -6.623 9.175 13.215 Atomic orbital electron populations 1.24802 0.95807 1.01956 1.01613 1.23181 0.94293 0.99510 0.99638 1.18475 0.84147 1.00422 0.97404 1.21560 0.95132 0.99965 0.97329 1.22061 0.94861 0.98758 0.91738 1.62107 1.12192 1.48265 1.03130 1.20683 0.87186 0.99390 0.94213 1.18678 1.09842 0.91812 0.94303 1.20376 0.97190 0.93292 0.95651 1.20371 1.14714 0.82833 0.96420 1.98288 1.97087 1.13909 1.98236 1.20697 0.97648 0.92745 0.96961 1.21200 1.08723 0.94378 0.98890 1.18912 0.92940 0.84155 0.92597 1.83633 1.73965 1.12781 1.40422 1.20759 1.46507 0.88710 0.90658 0.87502 1.24431 0.95741 0.95085 0.98291 1.69640 1.43689 1.06837 1.30669 0.86461 0.79933 0.79143 0.82638 1.20078 1.20716 1.17083 1.22447 0.93571 0.95677 0.96394 1.21620 0.95978 1.01875 0.94821 0.76848 0.89487 0.90709 0.91549 0.90630 0.94919 0.90609 0.93617 0.85767 0.86214 0.84086 0.90895 0.92898 0.89008 0.91023 0.91319 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.22 -2.65 19.25 29.55 0.57 -2.08 16 2 C -0.17 -2.24 12.57 -37.12 -0.47 -2.71 16 3 C 0.01 0.19 2.63 -93.28 -0.25 -0.06 16 4 C -0.10 -1.24 5.33 -26.65 -0.14 -1.38 16 5 C 0.05 0.70 5.46 -3.83 -0.02 0.68 16 6 N -0.53 -8.33 4.68 -236.11 -1.11 -9.44 16 7 C 0.11 1.81 4.98 -4.98 -0.02 1.79 16 8 C -0.14 -2.59 4.87 -104.44 -0.51 -3.10 16 9 C -0.05 -0.75 9.46 -39.57 -0.37 -1.13 16 10 C -0.12 -1.94 6.32 -39.45 -0.25 -2.19 16 11 Cl -0.10 -1.52 28.95 -51.86 -1.50 -3.03 16 12 C -0.06 -1.07 9.82 -39.57 -0.39 -1.46 16 13 C -0.21 -4.20 9.17 -39.40 -0.36 -4.56 16 14 C 0.17 3.44 5.18 -39.11 -0.20 3.24 16 15 O -0.20 -4.66 5.55 0.00 0.00 -4.66 16 16 C -0.39 -9.97 9.94 30.89 0.31 -9.66 16 17 H 0.11 2.82 5.43 -52.49 -0.29 2.54 16 18 C 0.07 1.79 5.49 -17.52 -0.10 1.70 16 19 N -0.87 -23.78 13.96 55.48 0.77 -23.00 16 20 Si 0.89 19.82 28.62 -169.99 -4.87 14.96 16 21 H -0.28 -6.15 7.11 56.52 0.40 -5.74 16 22 H -0.28 -6.20 7.11 56.52 0.40 -5.80 16 23 H -0.25 -5.21 4.63 56.52 0.26 -4.95 16 24 C 0.05 0.81 4.13 -3.83 -0.02 0.79 16 25 C -0.11 -1.61 5.33 -26.66 -0.14 -1.75 16 26 H 0.21 1.71 7.80 -54.10 -0.42 1.29 16 27 H 0.09 1.20 8.14 -51.93 -0.42 0.78 16 28 H 0.07 0.93 8.14 -51.93 -0.42 0.51 16 29 H 0.07 0.70 8.14 -51.93 -0.42 0.28 16 30 H 0.08 0.85 8.07 -51.93 -0.42 0.43 16 31 H 0.03 0.44 8.14 -51.93 -0.42 0.02 16 32 H 0.08 1.04 7.99 -51.93 -0.41 0.62 16 33 H 0.05 0.81 7.65 -51.93 -0.40 0.41 16 34 H 0.12 1.80 8.06 -52.49 -0.42 1.37 16 35 H 0.12 1.84 8.06 -52.48 -0.42 1.41 16 36 H 0.14 2.91 5.64 -52.49 -0.30 2.62 16 37 H 0.28 7.13 8.31 -40.82 -0.34 6.79 16 38 H 0.05 1.03 5.42 -51.93 -0.28 0.75 16 39 H 0.09 1.82 5.11 -51.93 -0.27 1.56 16 40 H 0.07 1.09 8.14 -51.93 -0.42 0.67 16 41 H 0.07 1.05 8.14 -51.93 -0.42 0.63 16 LS Contribution 346.96 15.07 5.23 5.23 Total: -1.00 -26.35 346.96 -9.27 -35.63 By element: Atomic # 1 Polarization: 11.63 SS G_CDS: -5.44 Total: 6.20 kcal Atomic # 6 Polarization: -19.52 SS G_CDS: -2.36 Total: -21.88 kcal Atomic # 7 Polarization: -32.11 SS G_CDS: -0.33 Total: -32.44 kcal Atomic # 8 Polarization: -4.66 SS G_CDS: 0.00 Total: -4.66 kcal Atomic # 14 Polarization: 19.82 SS G_CDS: -4.87 Total: 14.96 kcal Atomic # 17 Polarization: -1.52 SS G_CDS: -1.50 Total: -3.03 kcal Total LS contribution 5.23 Total: 5.23 kcal Total: -26.35 -9.27 -35.63 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000830326458.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 78.319 kcal (2) G-P(sol) polarization free energy of solvation -26.355 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 51.964 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.271 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.626 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.693 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds