Wall clock time and date at job start Tue Mar 31 2020 12:42:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17402 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 N 1.46501 * 109.47091 * 125.51240 * 3 2 1 5 5 C 1.37103 * 119.99553 * 263.94473 * 4 3 2 6 6 H 1.08009 * 119.99666 * 197.50741 * 5 4 3 7 7 C 1.38948 * 120.00512 * 17.50876 * 5 4 3 8 8 N 1.31410 * 119.99381 * 15.27410 * 7 5 4 9 9 Si 1.86795 * 120.00180 * 195.27634 * 7 5 4 10 10 H 1.48502 * 109.47219 * 59.99954 * 9 7 5 11 11 H 1.48500 * 109.47195 * 179.97438 * 9 7 5 12 12 H 1.48504 * 109.47071 * 299.99692 * 9 7 5 13 13 C 1.34774 * 120.00111 * 83.93830 * 4 3 2 14 14 O 1.21298 * 119.99641 * 174.49589 * 13 4 3 15 15 C 1.50697 * 119.99932 * 354.77081 * 13 4 3 16 16 H 1.08992 * 109.47425 * 334.70767 * 15 13 4 17 17 C 1.52999 * 109.47076 * 214.70223 * 15 13 4 18 18 C 1.52991 * 109.47197 * 67.38652 * 17 15 13 19 19 C 1.53003 * 109.47211 * 184.48317 * 18 17 15 20 20 C 1.50703 * 109.46971 * 94.70444 * 15 13 4 21 21 C 1.38261 * 119.99434 * 59.72118 * 20 15 13 22 22 C 1.38222 * 120.02840 * 179.76827 * 21 20 15 23 23 C 1.38240 * 120.01174 * 0.51067 * 22 21 20 24 24 C 1.38333 * 119.98408 * 359.74854 * 23 22 21 25 25 Cl 1.73599 * 120.01198 * 180.02562 * 24 23 22 26 26 C 1.38192 * 119.99292 * 240.00094 * 20 15 13 27 27 H 4.40642 * 5.51303 * 180.02562 * 4 1 2 28 28 H 1.08995 * 109.47326 * 5.51216 * 3 2 1 29 29 H 1.08995 * 109.47352 * 245.50880 * 3 2 1 30 30 H 0.97007 * 119.99245 * 180.02562 * 8 7 5 31 31 H 1.09004 * 109.46648 * 187.39028 * 17 15 13 32 32 H 1.09007 * 109.47225 * 307.38410 * 17 15 13 33 33 H 1.08993 * 109.47568 * 304.48902 * 18 17 15 34 34 H 1.09001 * 109.46997 * 64.48685 * 18 17 15 35 35 H 1.09004 * 109.46882 * 184.92263 * 19 18 17 36 36 H 1.08992 * 109.47452 * 304.92405 * 19 18 17 37 37 H 1.09001 * 109.46463 * 64.92540 * 19 18 17 38 38 H 1.08000 * 119.99079 * 0.02562 * 21 20 15 39 39 H 1.08001 * 119.99651 * 180.25156 * 22 21 20 40 40 H 1.07997 * 120.00960 * 179.71945 * 23 22 21 41 41 H 1.08005 * 120.00720 * 359.97438 * 26 20 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1340 0.8032 -1.1243 5 6 3.4808 0.1933 -2.3022 6 1 4.0941 0.7166 -3.0211 7 6 3.0434 -1.0978 -2.5713 8 7 2.0698 -1.6227 -1.8619 9 14 3.8395 -2.0871 -3.9413 10 1 5.2876 -2.2510 -3.6564 11 1 3.1974 -3.4236 -4.0241 12 1 3.6665 -1.3734 -5.2321 13 6 3.2418 2.1409 -1.0007 14 8 3.7387 2.7943 -1.8938 15 6 2.7508 2.8241 0.2495 16 1 1.9754 2.2160 0.7152 17 6 2.1758 4.1954 -0.1110 18 6 0.9012 4.0128 -0.9372 19 6 0.3879 5.3805 -1.3921 20 6 3.8982 2.9975 1.2109 21 6 5.0083 3.7322 0.8370 22 6 6.0590 3.8957 1.7200 23 6 6.0052 3.3158 2.9738 24 6 4.8972 2.5762 3.3464 25 17 4.8286 1.8483 4.9210 26 6 3.8433 2.4174 2.4640 27 1 -1.0501 0.0000 0.0004 28 1 3.0098 -1.0220 -0.0987 29 1 3.0092 0.4268 0.9351 30 1 1.7647 -2.5243 -2.0496 31 1 1.9417 4.7426 0.8022 32 1 2.9085 4.7553 -0.6922 33 1 1.1191 3.3977 -1.8102 34 1 0.1407 3.5234 -0.3287 35 1 -0.5658 5.2582 -1.9056 36 1 0.2530 6.0252 -0.5237 37 1 1.1110 5.8323 -2.0712 38 1 5.0526 4.1820 -0.1438 39 1 6.9241 4.4730 1.4289 40 1 6.8282 3.4398 3.6620 41 1 2.9779 1.8401 2.7544 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000861520902.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:42:59 Heat of formation + Delta-G solvation = 34.056323 kcal Electronic energy + Delta-G solvation = -24899.827275 eV Core-core repulsion = 21386.115845 eV Total energy + Delta-G solvation = -3513.711430 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 319.108 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -39.93827 -38.33957 -36.42569 -35.56630 -34.62430 -32.42363 -31.83582 -31.17389 -30.59706 -28.44659 -26.53976 -25.19970 -23.84130 -22.59509 -21.51228 -20.97278 -18.64243 -17.87694 -16.92694 -16.78354 -16.27923 -15.39616 -15.05844 -14.78612 -14.41325 -14.22942 -14.06659 -13.69442 -13.44704 -13.24536 -13.16889 -12.58262 -12.29452 -12.14769 -12.02405 -11.68624 -11.47898 -11.44460 -11.32135 -11.15131 -11.01921 -10.86294 -10.60701 -10.56402 -10.35165 -10.30887 -10.18710 -9.39849 -9.31643 -8.92996 -8.88298 -8.60108 -8.21189 -7.87663 -6.33416 -3.89651 1.30990 1.38174 2.18987 3.15704 3.23201 3.26256 3.64270 3.73508 3.88122 4.03086 4.15727 4.76666 4.87613 4.97202 5.06095 5.17698 5.30370 5.40359 5.44057 5.47661 5.50076 5.54074 5.68063 5.81575 5.92820 5.95043 6.05871 6.08477 6.19431 6.29369 6.30504 6.35388 6.40289 6.51043 6.64833 6.77765 6.80974 6.82977 6.94658 7.03589 7.53081 8.02027 8.40094 8.77724 9.10523 9.33366 9.87405 10.66201 Molecular weight = 319.11amu Principal moments of inertia in cm(-1) A = 0.010371 B = 0.005090 C = 0.004355 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2699.217037 B = 5499.816023 C = 6427.273602 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.264 4.264 2 C -0.110 4.110 3 C 0.229 3.771 4 N -0.436 5.436 5 C -0.310 4.310 6 H 0.104 0.896 7 C 0.030 3.970 8 N -0.869 5.869 9 Si 0.925 3.075 10 H -0.274 1.274 11 H -0.284 1.284 12 H -0.273 1.273 13 C 0.465 3.535 14 O -0.579 6.579 15 C -0.070 4.070 16 H 0.091 0.909 17 C -0.091 4.091 18 C -0.124 4.124 19 C -0.146 4.146 20 C -0.048 4.048 21 C -0.096 4.096 22 C -0.108 4.108 23 C -0.120 4.120 24 C -0.034 4.034 25 Cl -0.080 7.080 26 C -0.108 4.108 27 H 0.199 0.801 28 H 0.118 0.882 29 H 0.057 0.943 30 H 0.269 0.731 31 H 0.059 0.941 32 H 0.075 0.925 33 H 0.070 0.930 34 H 0.057 0.943 35 H 0.049 0.951 36 H 0.048 0.952 37 H 0.053 0.947 38 H 0.137 0.863 39 H 0.129 0.871 40 H 0.128 0.872 41 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.524 7.684 10.158 12.828 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.283 4.283 2 C -0.111 4.111 3 C 0.106 3.894 4 N -0.154 5.154 5 C -0.438 4.438 6 H 0.121 0.879 7 C -0.174 4.174 8 N -0.508 5.508 9 Si 0.752 3.248 10 H -0.199 1.199 11 H -0.210 1.210 12 H -0.199 1.199 13 C 0.253 3.747 14 O -0.463 6.463 15 C -0.091 4.091 16 H 0.109 0.891 17 C -0.129 4.129 18 C -0.162 4.162 19 C -0.203 4.203 20 C -0.049 4.049 21 C -0.114 4.114 22 C -0.127 4.127 23 C -0.138 4.138 24 C -0.060 4.060 25 Cl -0.052 7.052 26 C -0.127 4.127 27 H 0.216 0.784 28 H 0.136 0.864 29 H 0.075 0.925 30 H 0.080 0.920 31 H 0.078 0.922 32 H 0.094 0.906 33 H 0.089 0.911 34 H 0.076 0.924 35 H 0.068 0.932 36 H 0.067 0.933 37 H 0.072 0.928 38 H 0.155 0.845 39 H 0.147 0.853 40 H 0.146 0.854 41 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 1.692 7.716 9.829 12.610 hybrid contribution -0.099 -0.969 -0.478 1.085 sum 1.593 6.747 9.352 11.641 Atomic orbital electron populations 1.24273 0.95354 1.04615 1.04050 1.23206 0.94325 0.96763 0.96848 1.18417 0.84174 0.99118 0.87724 1.43670 1.55598 1.03957 1.12160 1.19657 1.30088 0.97562 0.96446 0.87850 1.25298 0.95372 0.97948 0.98772 1.70015 1.23720 1.16460 1.40581 0.86016 0.79295 0.78523 0.81009 1.19908 1.20982 1.19878 1.19691 0.84670 0.82220 0.88100 1.90501 1.48819 1.63916 1.43041 1.20429 0.95402 0.98686 0.94614 0.89077 1.21416 0.97550 0.94503 0.99460 1.21500 0.96601 0.97438 1.00635 1.21718 1.00619 0.97300 1.00693 1.19660 0.95839 0.96234 0.93174 1.21322 0.92522 0.97505 1.00060 1.21091 0.98857 0.99722 0.92985 1.20973 0.97126 0.98369 0.97370 1.20811 0.97161 1.00645 0.87406 1.98351 1.98499 1.82262 1.26050 1.20987 0.98239 1.00588 0.92888 0.78409 0.86429 0.92504 0.92039 0.92184 0.90627 0.91091 0.92438 0.93150 0.93267 0.92790 0.84525 0.85263 0.85382 0.84974 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.26 -5.30 19.25 29.55 0.57 -4.73 16 2 C -0.11 -2.40 10.37 -37.12 -0.39 -2.78 16 3 C 0.23 5.05 4.78 -6.83 -0.03 5.02 16 4 N -0.44 -10.71 2.60 -117.93 -0.31 -11.01 16 5 C -0.31 -8.33 9.39 -14.93 -0.14 -8.47 16 6 H 0.10 2.92 7.32 -52.48 -0.38 2.53 16 7 C 0.03 0.76 5.03 -17.47 -0.09 0.67 16 8 N -0.87 -22.32 9.14 55.50 0.51 -21.82 16 9 Si 0.92 20.36 29.58 -169.99 -5.03 15.33 16 10 H -0.27 -5.97 7.11 56.52 0.40 -5.56 16 11 H -0.28 -6.17 7.11 56.52 0.40 -5.77 16 12 H -0.27 -6.10 7.11 56.52 0.40 -5.69 16 13 C 0.47 10.66 5.24 -10.99 -0.06 10.60 16 14 O -0.58 -14.84 15.19 5.54 0.08 -14.75 16 15 C -0.07 -1.26 1.55 -92.92 -0.14 -1.40 16 16 H 0.09 1.64 5.46 -51.93 -0.28 1.36 16 17 C -0.09 -1.49 4.18 -26.74 -0.11 -1.60 16 18 C -0.12 -2.05 5.83 -26.73 -0.16 -2.21 16 19 C -0.15 -1.99 9.91 37.16 0.37 -1.62 16 20 C -0.05 -0.79 4.54 -104.63 -0.48 -1.26 16 21 C -0.10 -1.50 8.87 -39.58 -0.35 -1.85 16 22 C -0.11 -1.41 10.05 -39.59 -0.40 -1.81 16 23 C -0.12 -1.51 9.83 -39.55 -0.39 -1.89 16 24 C -0.03 -0.46 6.32 -39.50 -0.25 -0.71 16 25 Cl -0.08 -1.00 28.96 -51.86 -1.50 -2.50 16 26 C -0.11 -1.61 8.56 -39.55 -0.34 -1.95 16 27 H 0.20 3.23 7.80 -54.09 -0.42 2.81 16 28 H 0.12 2.79 6.22 -51.93 -0.32 2.46 16 29 H 0.06 1.10 5.75 -51.93 -0.30 0.80 16 30 H 0.27 6.67 8.31 -40.82 -0.34 6.34 16 31 H 0.06 0.84 8.13 -51.93 -0.42 0.42 16 32 H 0.08 1.30 7.13 -51.93 -0.37 0.93 16 33 H 0.07 1.43 7.31 -51.93 -0.38 1.05 16 34 H 0.06 0.91 8.14 -51.93 -0.42 0.49 16 35 H 0.05 0.64 8.14 -51.93 -0.42 0.21 16 36 H 0.05 0.58 8.14 -51.93 -0.42 0.16 16 37 H 0.05 0.74 8.14 -51.93 -0.42 0.32 16 38 H 0.14 2.26 7.19 -52.49 -0.38 1.88 16 39 H 0.13 1.34 8.06 -52.49 -0.42 0.91 16 40 H 0.13 1.32 8.06 -52.49 -0.42 0.89 16 41 H 0.13 1.84 7.77 -52.48 -0.41 1.44 16 LS Contribution 357.57 15.07 5.39 5.39 Total: -1.00 -28.80 357.57 -8.57 -37.37 By element: Atomic # 1 Polarization: 13.31 SS G_CDS: -5.34 Total: 7.97 kcal Atomic # 6 Polarization: -13.61 SS G_CDS: -2.38 Total: -15.98 kcal Atomic # 7 Polarization: -33.03 SS G_CDS: 0.20 Total: -32.83 kcal Atomic # 8 Polarization: -14.84 SS G_CDS: 0.08 Total: -14.75 kcal Atomic # 14 Polarization: 20.36 SS G_CDS: -5.03 Total: 15.33 kcal Atomic # 17 Polarization: -1.00 SS G_CDS: -1.50 Total: -2.50 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -28.80 -8.57 -37.37 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000861520902.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.429 kcal (2) G-P(sol) polarization free energy of solvation -28.799 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.631 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.574 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.373 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.056 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds