Wall clock time and date at job start Tue Mar 31 2020 12:12:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.35250 * 126.06772 * 2 1 4 4 C 1.40424 * 107.86228 * 180.26560 * 3 2 1 5 5 N 1.39988 * 125.97765 * 179.74079 * 4 3 2 6 6 C 1.46495 * 119.99726 * 0.02562 * 5 4 3 7 7 H 1.09000 * 109.47346 * 35.00434 * 6 5 4 8 8 C 1.52996 * 109.47262 * 274.99984 * 6 5 4 9 9 C 1.50710 * 109.47099 * 155.00215 * 6 5 4 10 10 C 1.38264 * 119.99072 * 39.72225 * 9 6 5 11 11 C 1.38216 * 120.02123 * 179.76562 * 10 9 6 12 12 C 1.38237 * 120.01829 * 0.51402 * 11 10 9 13 13 C 1.38329 * 119.98300 * 359.73999 * 12 11 10 14 14 Cl 1.73601 * 120.01267 * 180.02562 * 13 12 11 15 15 C 1.38188 * 119.99007 * 220.00074 * 9 6 5 16 16 N 1.31224 * 108.04781 * 359.74086 * 4 3 2 17 17 N 1.34965 * 126.06870 * 179.81462 * 2 1 3 18 18 C 1.46491 * 125.97174 * 359.97438 * 17 2 1 19 19 C 1.50702 * 109.46957 * 269.71224 * 18 17 2 20 20 H 1.08002 * 120.00299 * 0.02562 * 19 18 17 21 21 C 1.37884 * 119.99942 * 179.72213 * 19 18 17 22 22 N 1.31514 * 119.99698 * 0.28408 * 21 19 18 23 23 Si 1.86794 * 119.99837 * 180.27476 * 21 19 18 24 24 H 1.48504 * 109.47196 * 60.00645 * 23 21 19 25 25 H 1.48504 * 109.46887 * 180.02562 * 23 21 19 26 26 H 1.48502 * 109.47679 * 300.00280 * 23 21 19 27 27 H 1.09001 * 109.46771 * 270.18580 * 1 2 3 28 28 H 1.08994 * 109.47118 * 30.18415 * 1 2 3 29 29 H 1.09000 * 109.47010 * 150.18788 * 1 2 3 30 30 H 1.08002 * 126.06975 * 0.02562 * 3 2 1 31 31 H 0.97003 * 120.00112 * 180.02562 * 5 4 3 32 32 H 1.09003 * 109.47258 * 180.02562 * 8 6 5 33 33 H 1.09003 * 109.47701 * 300.00162 * 8 6 5 34 34 H 1.09000 * 109.47383 * 60.00189 * 8 6 5 35 35 H 1.07997 * 119.98838 * 359.97438 * 10 9 6 36 36 H 1.08002 * 119.98888 * 180.25269 * 11 10 9 37 37 H 1.07998 * 120.00951 * 179.71889 * 12 11 10 38 38 H 1.07994 * 120.01631 * 359.97438 * 15 9 6 39 39 H 1.09004 * 109.47166 * 149.71490 * 18 17 2 40 40 H 1.08994 * 109.47507 * 29.71196 * 18 17 2 41 41 H 0.97005 * 119.99651 * 179.97438 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3033 1.0933 0.0000 4 6 3.6373 0.6545 -0.0062 5 7 4.7724 1.4738 -0.0133 6 6 4.6238 2.9311 -0.0143 7 1 3.7528 3.2080 0.5796 8 6 4.4392 3.4241 -1.4509 9 6 5.8573 3.5622 0.5787 10 6 7.1065 3.0480 0.2841 11 6 8.2384 3.6293 0.8237 12 6 8.1216 4.7185 1.6668 13 6 6.8717 5.2301 1.9661 14 17 6.7241 6.5984 3.0244 15 6 5.7390 4.6511 1.4214 16 7 3.6337 -0.6577 -0.0041 17 7 2.3017 -1.0909 0.0035 18 6 1.8500 -2.4845 0.0086 19 6 1.7024 -2.9595 1.4311 20 1 1.9226 -2.2902 2.2496 21 6 1.2802 -4.2468 1.6878 22 7 1.0116 -5.0617 0.6911 23 14 1.0899 -4.8331 3.4511 24 1 0.0936 -3.9827 4.1508 25 1 0.6273 -6.2443 3.4562 26 1 2.3978 -4.7389 4.1481 27 1 -0.3633 0.0033 1.0277 28 1 -0.3633 0.8883 -0.5167 29 1 -0.3633 -0.8917 -0.5109 30 1 1.9720 2.1212 0.0004 31 1 5.6573 1.0764 -0.0177 32 1 4.3292 4.5085 -1.4516 33 1 5.3103 3.1473 -2.0448 34 1 3.5472 2.9677 -1.8798 35 1 7.1980 2.1941 -0.3706 36 1 9.2142 3.2298 0.5899 37 1 9.0059 5.1698 2.0920 38 1 4.7630 5.0501 1.6548 39 1 2.5819 -3.1056 -0.5078 40 1 0.8887 -2.5567 -0.5001 41 1 0.7150 -5.9675 0.8717 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000271010857.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:12:10 Heat of formation + Delta-G solvation = 88.447989 kcal Electronic energy + Delta-G solvation = -23245.613285 eV Core-core repulsion = 19766.553206 eV Total energy + Delta-G solvation = -3479.060079 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 319.115 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -40.39218 -39.78747 -37.01691 -36.09045 -33.62769 -32.38404 -31.18398 -30.95575 -30.20392 -29.05755 -26.53080 -26.11664 -24.03388 -23.18132 -22.65859 -21.13084 -19.52650 -19.07160 -17.35287 -16.64467 -16.28690 -15.81263 -15.47189 -15.21455 -14.62019 -14.38303 -14.12780 -14.08906 -13.89086 -13.62220 -13.26057 -12.92271 -12.47596 -12.43941 -12.25719 -12.04384 -11.99480 -11.70905 -11.62015 -11.49025 -11.37347 -11.31898 -11.02656 -10.90563 -10.75661 -10.27167 -10.04533 -9.57518 -9.28492 -9.14546 -8.95468 -8.60633 -7.75649 -7.02894 -6.21148 -4.29091 0.86360 0.95661 1.83781 2.89415 3.16717 3.24995 3.28793 3.33147 3.39714 3.75750 4.16204 4.33193 4.35473 4.52985 4.76060 4.92763 5.06087 5.10751 5.11852 5.28823 5.39480 5.43824 5.53962 5.65406 5.76025 5.81914 5.90605 5.99571 6.03796 6.08290 6.15363 6.19207 6.31896 6.34523 6.49048 6.72296 6.87946 7.07585 7.20576 7.70536 7.72080 7.94478 8.13449 8.21241 8.76475 8.92424 9.36910 10.85258 Molecular weight = 319.11amu Principal moments of inertia in cm(-1) A = 0.016820 B = 0.002580 C = 0.002469 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1664.247557 B =10849.820933 C =11338.702703 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.107 3.893 3 C -0.336 4.336 4 C 0.314 3.686 5 N -0.722 5.722 6 C 0.210 3.790 7 H 0.087 0.913 8 C -0.163 4.163 9 C -0.070 4.070 10 C -0.106 4.106 11 C -0.104 4.104 12 C -0.115 4.115 13 C -0.032 4.032 14 Cl -0.073 7.073 15 C -0.100 4.100 16 N -0.348 5.348 17 N -0.325 5.325 18 C 0.261 3.739 19 C -0.534 4.534 20 H 0.063 0.937 21 C 0.065 3.935 22 N -0.893 5.893 23 Si 0.905 3.095 24 H -0.274 1.274 25 H -0.284 1.284 26 H -0.275 1.275 27 H 0.076 0.924 28 H 0.071 0.929 29 H 0.072 0.928 30 H 0.129 0.871 31 H 0.396 0.604 32 H 0.060 0.940 33 H 0.057 0.943 34 H 0.069 0.931 35 H 0.130 0.870 36 H 0.133 0.867 37 H 0.132 0.868 38 H 0.135 0.865 39 H 0.050 0.950 40 H 0.051 0.949 41 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.193 21.228 -1.683 23.194 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.026 4.026 3 C -0.369 4.369 4 C 0.058 3.942 5 N -0.365 5.365 6 C 0.103 3.897 7 H 0.105 0.895 8 C -0.222 4.222 9 C -0.071 4.071 10 C -0.124 4.124 11 C -0.122 4.122 12 C -0.133 4.133 13 C -0.059 4.059 14 Cl -0.044 7.044 15 C -0.120 4.120 16 N -0.179 5.179 17 N -0.105 5.105 18 C 0.143 3.857 19 C -0.572 4.572 20 H 0.081 0.919 21 C -0.138 4.138 22 N -0.531 5.531 23 Si 0.732 3.268 24 H -0.200 1.200 25 H -0.210 1.210 26 H -0.200 1.200 27 H 0.095 0.905 28 H 0.089 0.911 29 H 0.091 0.909 30 H 0.147 0.853 31 H 0.232 0.768 32 H 0.079 0.921 33 H 0.076 0.924 34 H 0.088 0.912 35 H 0.148 0.852 36 H 0.151 0.849 37 H 0.150 0.850 38 H 0.153 0.847 39 H 0.068 0.932 40 H 0.069 0.931 41 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges 9.649 20.057 -1.637 22.317 hybrid contribution -0.187 0.246 1.107 1.150 sum 9.462 20.303 -0.530 22.406 Atomic orbital electron populations 1.20344 0.88333 1.02697 1.03058 1.20851 0.94473 0.87432 0.99864 1.20423 0.90641 0.98114 1.27735 1.19012 0.87276 0.89574 0.98297 1.43447 1.04584 1.02026 1.86491 1.19480 0.94373 0.79899 0.95908 0.89507 1.22305 1.02975 1.00736 0.96165 1.19996 0.95319 0.95275 0.96490 1.21103 0.91801 0.99789 0.99712 1.21115 0.99091 0.95351 0.96636 1.21060 0.96009 0.97218 0.99051 1.20880 0.95112 0.92463 0.97424 1.98374 1.98331 1.42962 1.64771 1.20895 0.98036 0.96162 0.96864 1.77357 0.98899 1.08804 1.32865 1.48890 1.01373 1.07388 1.52867 1.19585 0.95738 0.71718 0.98682 1.21302 1.46429 0.98008 0.91493 0.91890 1.24926 0.94764 0.96097 0.98041 1.69914 1.44963 1.07123 1.31124 0.86430 0.78782 0.77640 0.83906 1.19975 1.20990 1.20006 0.90517 0.91051 0.90906 0.85316 0.76804 0.92064 0.92360 0.91240 0.85200 0.84931 0.85037 0.84669 0.93218 0.93137 0.92272 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.40 10.11 36.01 0.36 -1.04 16 2 C 0.11 2.16 6.92 -82.28 -0.57 1.59 16 3 C -0.34 -6.17 9.83 -39.82 -0.39 -6.56 16 4 C 0.31 6.07 8.14 -154.55 -1.26 4.81 16 5 N -0.72 -10.72 5.23 -54.70 -0.29 -11.00 16 6 C 0.21 2.41 2.77 -69.08 -0.19 2.22 16 7 H 0.09 1.02 7.00 -51.93 -0.36 0.66 16 8 C -0.16 -1.66 9.48 37.16 0.35 -1.30 16 9 C -0.07 -0.72 4.96 -104.63 -0.52 -1.24 16 10 C -0.11 -1.00 9.06 -39.58 -0.36 -1.36 16 11 C -0.10 -0.86 10.04 -39.59 -0.40 -1.26 16 12 C -0.11 -0.99 9.83 -39.55 -0.39 -1.38 16 13 C -0.03 -0.31 6.32 -39.49 -0.25 -0.56 16 14 Cl -0.07 -0.67 28.96 -51.86 -1.50 -2.17 16 15 C -0.10 -0.99 9.45 -39.55 -0.37 -1.36 16 16 N -0.35 -8.10 12.59 31.41 0.40 -7.70 16 17 N -0.33 -7.69 3.59 -58.33 -0.21 -7.90 16 18 C 0.26 6.76 5.99 -5.20 -0.03 6.73 16 19 C -0.53 -14.87 9.39 -34.44 -0.32 -15.19 16 20 H 0.06 1.81 7.81 -52.49 -0.41 1.40 16 21 C 0.06 1.78 5.46 -17.82 -0.10 1.69 16 22 N -0.89 -25.33 13.29 55.43 0.74 -24.59 16 23 Si 0.91 21.30 29.54 -169.99 -5.02 16.28 16 24 H -0.27 -6.32 7.11 56.52 0.40 -5.92 16 25 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 26 H -0.27 -6.50 7.11 56.52 0.40 -6.10 16 27 H 0.08 1.22 8.14 -51.93 -0.42 0.80 16 28 H 0.07 0.92 8.14 -51.93 -0.42 0.50 16 29 H 0.07 1.22 7.06 -51.93 -0.37 0.86 16 30 H 0.13 1.97 7.45 -52.49 -0.39 1.58 16 31 H 0.40 5.57 6.98 -40.82 -0.28 5.29 16 32 H 0.06 0.52 8.14 -51.93 -0.42 0.09 16 33 H 0.06 0.58 8.14 -51.93 -0.42 0.16 16 34 H 0.07 0.79 8.14 -51.93 -0.42 0.37 16 35 H 0.13 1.13 6.90 -52.49 -0.36 0.76 16 36 H 0.13 0.80 8.06 -52.49 -0.42 0.38 16 37 H 0.13 0.90 8.06 -52.49 -0.42 0.48 16 38 H 0.14 1.18 8.04 -52.49 -0.42 0.75 16 39 H 0.05 1.38 8.14 -51.93 -0.42 0.96 16 40 H 0.05 1.29 7.03 -51.93 -0.36 0.93 16 41 H 0.27 7.17 8.31 -40.82 -0.34 6.83 16 LS Contribution 363.84 15.07 5.48 5.48 Total: -1.00 -30.89 363.84 -10.32 -41.21 By element: Atomic # 1 Polarization: 10.11 SS G_CDS: -5.48 Total: 4.63 kcal Atomic # 6 Polarization: -9.79 SS G_CDS: -4.43 Total: -14.23 kcal Atomic # 7 Polarization: -51.83 SS G_CDS: 0.64 Total: -51.20 kcal Atomic # 14 Polarization: 21.30 SS G_CDS: -5.02 Total: 16.28 kcal Atomic # 17 Polarization: -0.67 SS G_CDS: -1.50 Total: -2.17 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -30.89 -10.32 -41.21 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000271010857.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 129.655 kcal (2) G-P(sol) polarization free energy of solvation -30.888 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 98.767 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.319 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.207 kcal (6) G-S(sol) free energy of system = (1) + (5) 88.448 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds