Wall clock time and date at job start Tue Mar 31 2020 12:50:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52993 * 109.47320 * 2 1 4 4 C 1.53004 * 109.46874 * 300.00105 * 3 2 1 5 5 C 1.52997 * 109.47320 * 179.97438 * 3 2 1 6 6 N 1.46499 * 109.47502 * 59.99606 * 3 2 1 7 7 C 1.46507 * 119.99633 * 68.49643 * 6 3 2 8 8 C 1.50699 * 109.47088 * 80.25938 * 7 6 3 9 9 H 1.08005 * 119.99998 * 359.97438 * 8 7 6 10 10 C 1.37877 * 119.99925 * 179.97438 * 8 7 6 11 11 N 1.31513 * 119.99665 * 179.97438 * 10 8 7 12 12 Si 1.86795 * 119.99880 * 0.02562 * 10 8 7 13 13 H 1.48504 * 109.47256 * 90.00347 * 12 10 8 14 14 H 1.48502 * 109.46913 * 209.99445 * 12 10 8 15 15 H 1.48499 * 109.47400 * 329.99849 * 12 10 8 16 16 C 1.34779 * 120.00419 * 248.50058 * 6 3 2 17 17 O 1.21546 * 119.99675 * 2.23797 * 16 6 3 18 18 C 1.47843 * 119.99827 * 182.24385 * 16 6 3 19 19 C 1.39591 * 120.14667 * 21.81699 * 18 16 6 20 20 C 1.37944 * 119.85430 * 179.79083 * 19 18 16 21 21 C 1.38377 * 120.14215 * 0.49148 * 20 19 18 22 22 C 1.38342 * 120.29268 * 359.73990 * 21 20 19 23 23 C 1.50702 * 119.92685 * 179.97438 * 22 21 20 24 24 O 1.42901 * 109.47097 * 270.02559 * 23 22 21 25 25 C 1.42900 * 113.99614 * 180.02562 * 24 23 22 26 26 C 1.37982 * 120.14340 * 0.02562 * 22 21 20 27 27 H 1.09004 * 109.47679 * 60.00115 * 1 2 3 28 28 H 1.08998 * 109.47644 * 180.02562 * 1 2 3 29 29 H 1.09000 * 109.47181 * 300.00412 * 1 2 3 30 30 H 1.09003 * 109.46683 * 239.99637 * 2 1 3 31 31 H 1.09004 * 109.46963 * 120.00093 * 2 1 3 32 32 H 1.09005 * 109.47111 * 173.22990 * 4 3 2 33 33 H 1.09000 * 109.47027 * 293.22058 * 4 3 2 34 34 H 1.08999 * 109.47384 * 53.22615 * 4 3 2 35 35 H 1.08997 * 109.47352 * 300.00151 * 5 3 2 36 36 H 1.09010 * 109.46827 * 60.00030 * 5 3 2 37 37 H 1.09005 * 109.47298 * 179.97438 * 5 3 2 38 38 H 1.08999 * 109.46778 * 320.25738 * 7 6 3 39 39 H 1.08997 * 109.46792 * 200.25764 * 7 6 3 40 40 H 0.97005 * 119.99959 * 179.97438 * 11 10 8 41 41 H 1.07998 * 120.07488 * 0.02562 * 19 18 16 42 42 H 1.07995 * 119.92971 * 180.21235 * 20 19 18 43 43 H 1.08002 * 119.85733 * 179.76646 * 21 20 19 44 44 H 1.08997 * 109.46935 * 30.02413 * 23 22 21 45 45 H 1.09003 * 109.46793 * 150.02554 * 23 22 21 46 46 H 1.09004 * 109.47354 * 299.99287 * 25 24 23 47 47 H 1.08999 * 109.47726 * 59.99948 * 25 24 23 48 48 H 1.09008 * 109.46824 * 179.97438 * 25 24 23 49 49 H 1.08006 * 120.06749 * 180.02562 * 26 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 1.5300 2.1637 -1.2493 5 6 3.5700 1.4424 0.0006 6 7 1.5517 2.1331 1.1961 7 6 2.0521 1.7501 2.5187 8 6 3.3969 2.3891 2.7514 9 1 3.8353 3.0173 1.9900 10 6 4.0677 2.1717 3.9362 11 7 5.2415 2.7290 4.1390 12 14 3.3098 1.0846 5.2526 13 1 3.7379 -0.3215 5.0404 14 1 3.7598 1.5421 6.5918 15 1 1.8294 1.1688 5.1724 16 6 0.6420 3.1209 1.0798 17 8 0.1965 3.4111 -0.0132 18 6 0.1863 3.8513 2.2817 19 6 0.9748 3.8670 3.4335 20 6 0.5457 4.5540 4.5501 21 6 -0.6681 5.2182 4.5334 22 6 -1.4566 5.2026 3.3967 23 6 -2.7773 5.9283 3.3879 24 8 -3.8098 5.0437 3.8276 25 6 -5.1099 5.6362 3.8557 26 6 -1.0368 4.5232 2.2716 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3634 -1.0276 0.0005 29 1 -0.3633 0.5139 0.8899 30 1 1.8932 -0.5139 -0.8900 31 1 1.8933 -0.5139 0.8900 32 1 1.7910 3.2204 -1.1908 33 1 1.9889 1.7246 -2.1351 34 1 0.4467 2.0599 -1.3120 35 1 3.9330 0.9287 0.8908 36 1 3.9337 0.9284 -0.8892 37 1 3.9334 2.4701 0.0002 38 1 2.1512 0.6658 2.5696 39 1 1.3524 2.0873 3.2834 40 1 5.7133 2.5764 4.9727 41 1 1.9204 3.3455 3.4492 42 1 1.1563 4.5698 5.4407 43 1 -1.0013 5.7515 5.4115 44 1 -2.7247 6.7867 4.0575 45 1 -2.9976 6.2695 2.3763 46 1 -5.1060 6.4888 4.5349 47 1 -5.3784 5.9711 2.8538 48 1 -5.8371 4.9006 4.1996 49 1 -1.6531 4.5122 1.3847 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000187526687.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:50:54 Heat of formation + Delta-G solvation = -13.351098 kcal Electronic energy + Delta-G solvation = -28681.792579 eV Core-core repulsion = 24996.982433 eV Total energy + Delta-G solvation = -3684.810146 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 319.193 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -40.38431 -38.76646 -37.41243 -36.24147 -34.35956 -32.38696 -31.39978 -30.63006 -29.76054 -28.35043 -27.19043 -26.41529 -25.14393 -23.76551 -22.90963 -22.41388 -21.20238 -20.11399 -18.06122 -17.16270 -16.48472 -16.30411 -16.13387 -15.90476 -15.35160 -15.07028 -14.86524 -14.34314 -14.18992 -13.82328 -13.56655 -13.19733 -13.06906 -13.00454 -12.73044 -12.65018 -12.26610 -12.16611 -11.96637 -11.78588 -11.53384 -11.42607 -11.25435 -11.07839 -11.00328 -10.89606 -10.80196 -10.74179 -10.57740 -10.12558 -10.06120 -9.77240 -9.74409 -9.50143 -8.88926 -8.52571 -8.42151 -8.19166 -7.68864 -6.37012 -4.38226 1.41126 1.74321 3.09866 3.18743 3.22060 3.40539 3.74737 3.91941 4.13961 4.45636 4.90182 4.95742 4.99322 5.16115 5.22379 5.24992 5.30700 5.37692 5.41793 5.50003 5.51579 5.55382 5.58171 5.81370 5.94796 6.02867 6.05361 6.07185 6.15626 6.29609 6.31440 6.35311 6.42905 6.44323 6.52798 6.55231 6.60774 6.68387 6.81371 6.83105 6.94880 7.03841 7.05612 7.07918 7.18795 7.26500 7.41590 7.52339 8.05797 8.36964 8.73656 8.95605 9.20109 10.73242 Molecular weight = 319.19amu Principal moments of inertia in cm(-1) A = 0.010664 B = 0.005454 C = 0.004101 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2625.022213 B = 5132.754657 C = 6825.906739 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.128 4.128 3 C 0.173 3.827 4 C -0.130 4.130 5 C -0.147 4.147 6 N -0.570 5.570 7 C 0.178 3.822 8 C -0.541 4.541 9 H 0.090 0.910 10 C 0.082 3.918 11 N -0.876 5.876 12 Si 0.857 3.143 13 H -0.270 1.270 14 H -0.280 1.280 15 H -0.258 1.258 16 C 0.559 3.441 17 O -0.558 6.558 18 C -0.140 4.140 19 C -0.102 4.102 20 C -0.143 4.143 21 C -0.080 4.080 22 C -0.126 4.126 23 C 0.110 3.890 24 O -0.385 6.385 25 C 0.030 3.970 26 C -0.045 4.045 27 H 0.057 0.943 28 H 0.045 0.955 29 H 0.052 0.948 30 H 0.066 0.934 31 H 0.065 0.935 32 H 0.062 0.938 33 H 0.030 0.970 34 H 0.079 0.921 35 H 0.081 0.919 36 H 0.045 0.955 37 H 0.059 0.941 38 H 0.027 0.973 39 H 0.061 0.939 40 H 0.270 0.730 41 H 0.210 0.790 42 H 0.124 0.876 43 H 0.117 0.883 44 H 0.055 0.945 45 H 0.056 0.944 46 H 0.039 0.961 47 H 0.040 0.960 48 H 0.084 0.916 49 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.309 1.482 -1.226 12.458 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.167 4.167 3 C 0.088 3.912 4 C -0.187 4.187 5 C -0.205 4.205 6 N -0.299 5.299 7 C 0.057 3.943 8 C -0.578 4.578 9 H 0.108 0.892 10 C -0.124 4.124 11 N -0.511 5.511 12 Si 0.682 3.318 13 H -0.195 1.195 14 H -0.205 1.205 15 H -0.182 1.182 16 C 0.349 3.651 17 O -0.441 6.441 18 C -0.143 4.143 19 C -0.118 4.118 20 C -0.161 4.161 21 C -0.099 4.099 22 C -0.126 4.126 23 C 0.034 3.966 24 O -0.305 6.305 25 C -0.066 4.066 26 C -0.064 4.064 27 H 0.076 0.924 28 H 0.064 0.936 29 H 0.071 0.929 30 H 0.084 0.916 31 H 0.084 0.916 32 H 0.081 0.919 33 H 0.049 0.951 34 H 0.098 0.902 35 H 0.100 0.900 36 H 0.064 0.936 37 H 0.078 0.922 38 H 0.045 0.955 39 H 0.078 0.922 40 H 0.080 0.920 41 H 0.226 0.774 42 H 0.142 0.858 43 H 0.135 0.865 44 H 0.073 0.927 45 H 0.074 0.926 46 H 0.058 0.942 47 H 0.059 0.941 48 H 0.102 0.898 49 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -12.309 1.435 -1.609 12.497 hybrid contribution -0.252 -0.224 0.977 1.033 sum -12.561 1.211 -0.633 12.635 Atomic orbital electron populations 1.21759 0.96013 1.00433 1.02293 1.21895 0.96145 0.96675 1.01966 1.20432 0.94401 0.91154 0.85174 1.22339 1.02302 1.00142 0.93874 1.22207 0.93557 1.02868 1.01864 1.47775 1.39883 1.34031 1.08226 1.20675 0.96095 0.96510 0.80987 1.21391 1.01336 1.31430 1.03668 0.89244 1.24916 0.94554 0.94944 0.97950 1.69877 1.13170 1.42229 1.25837 0.87122 0.80883 0.81815 0.81962 1.19549 1.20494 1.18193 1.18222 0.79048 0.79734 0.88092 1.90721 1.58746 1.67861 1.26725 1.20052 0.96535 1.02355 0.95382 1.24106 1.03321 0.93812 0.90607 1.21224 0.96426 0.98909 0.99515 1.21168 0.94341 0.97754 0.96617 1.19302 0.95530 1.02904 0.94872 1.21290 0.85191 0.91361 0.98796 1.88008 1.15834 1.38705 1.87917 1.22733 0.84998 0.98756 1.00139 1.21006 0.94680 0.93376 0.97369 0.92392 0.93605 0.92879 0.91578 0.91628 0.91878 0.95150 0.90212 0.90037 0.93631 0.92177 0.95512 0.92232 0.92011 0.77442 0.85805 0.86503 0.92668 0.92570 0.94230 0.94141 0.89766 0.85676 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.29 9.36 37.16 0.35 -1.94 16 2 C -0.13 -2.06 4.95 -26.74 -0.13 -2.19 16 3 C 0.17 3.16 0.80 -131.82 -0.11 3.06 16 4 C -0.13 -2.32 6.69 37.16 0.25 -2.07 16 5 C -0.15 -2.73 7.26 37.16 0.27 -2.46 16 6 N -0.57 -11.58 1.75 -161.28 -0.28 -11.87 16 7 C 0.18 3.82 3.22 -5.19 -0.02 3.80 16 8 C -0.54 -13.06 5.81 -34.44 -0.20 -13.26 16 9 H 0.09 2.42 6.72 -52.48 -0.35 2.07 16 10 C 0.08 2.06 5.30 -17.82 -0.09 1.96 16 11 N -0.88 -23.62 13.96 55.43 0.77 -22.85 16 12 Si 0.86 18.66 27.31 -169.99 -4.64 14.01 16 13 H -0.27 -5.87 7.11 56.52 0.40 -5.47 16 14 H -0.28 -6.11 7.11 56.52 0.40 -5.71 16 15 H -0.26 -5.38 6.54 56.52 0.37 -5.01 16 16 C 0.56 11.72 6.99 -12.33 -0.09 11.64 16 17 O -0.56 -12.05 11.93 5.33 0.06 -11.98 16 18 C -0.14 -2.81 5.63 -104.97 -0.59 -3.40 16 19 C -0.10 -2.06 7.55 -39.18 -0.30 -2.36 16 20 C -0.14 -2.53 10.03 -39.64 -0.40 -2.93 16 21 C -0.08 -1.27 9.69 -39.49 -0.38 -1.65 16 22 C -0.13 -2.01 5.50 -104.68 -0.58 -2.59 16 23 C 0.11 1.42 6.06 36.01 0.22 1.64 16 24 O -0.39 -5.32 10.69 -35.23 -0.38 -5.70 16 25 C 0.03 0.29 11.01 101.05 1.11 1.40 16 26 C -0.05 -0.81 9.24 -39.19 -0.36 -1.17 16 27 H 0.06 0.90 6.29 -51.93 -0.33 0.57 16 28 H 0.04 0.61 8.14 -51.93 -0.42 0.19 16 29 H 0.05 0.92 7.33 -51.93 -0.38 0.53 16 30 H 0.07 0.93 8.14 -51.93 -0.42 0.51 16 31 H 0.07 1.08 7.04 -51.93 -0.37 0.71 16 32 H 0.06 1.26 6.87 -51.93 -0.36 0.90 16 33 H 0.03 0.47 8.14 -51.93 -0.42 0.05 16 34 H 0.08 1.48 4.48 -51.93 -0.23 1.24 16 35 H 0.08 1.65 6.53 -51.93 -0.34 1.31 16 36 H 0.04 0.72 8.14 -51.92 -0.42 0.30 16 37 H 0.06 1.22 7.32 -51.93 -0.38 0.84 16 38 H 0.03 0.57 6.36 -51.93 -0.33 0.24 16 39 H 0.06 1.30 3.35 -51.93 -0.17 1.13 16 40 H 0.27 6.87 8.31 -40.82 -0.34 6.53 16 41 H 0.21 4.62 2.21 -52.49 -0.12 4.51 16 42 H 0.12 2.01 8.06 -52.49 -0.42 1.59 16 43 H 0.12 1.51 8.06 -52.49 -0.42 1.08 16 44 H 0.06 0.60 8.08 -51.93 -0.42 0.18 16 45 H 0.06 0.66 8.08 -51.93 -0.42 0.24 16 46 H 0.04 0.31 8.14 -51.93 -0.42 -0.11 16 47 H 0.04 0.33 8.14 -51.93 -0.42 -0.09 16 48 H 0.08 0.68 8.14 -51.92 -0.42 0.26 16 49 H 0.13 2.16 7.81 -52.48 -0.41 1.75 16 LS Contribution 371.35 15.07 5.60 5.60 Total: -1.00 -27.49 371.35 -7.49 -34.98 By element: Atomic # 1 Polarization: 17.92 SS G_CDS: -7.57 Total: 10.34 kcal Atomic # 6 Polarization: -11.50 SS G_CDS: -1.04 Total: -12.54 kcal Atomic # 7 Polarization: -35.21 SS G_CDS: 0.49 Total: -34.72 kcal Atomic # 8 Polarization: -17.37 SS G_CDS: -0.31 Total: -17.68 kcal Atomic # 14 Polarization: 18.66 SS G_CDS: -4.64 Total: 14.01 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -27.49 -7.49 -34.98 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000187526687.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.629 kcal (2) G-P(sol) polarization free energy of solvation -27.493 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.864 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.487 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.980 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.351 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds