Wall clock time and date at job start Tue Mar 31 2020 12:41:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.52997 * 109.47317 * 2 1 4 4 C 1.52997 * 109.47513 * 239.99560 * 2 1 3 5 5 C 1.53003 * 109.47411 * 295.06865 * 4 2 1 6 6 H 1.08999 * 109.46588 * 321.39778 * 5 4 2 7 7 C 1.53000 * 109.47341 * 201.39738 * 5 4 2 8 8 C 1.52999 * 109.47062 * 66.37460 * 7 5 4 9 9 O 1.42906 * 109.47023 * 182.60914 * 8 7 5 10 10 C 1.53002 * 109.47012 * 81.39357 * 5 4 2 11 11 N 1.46496 * 109.47034 * 181.42879 * 10 5 4 12 12 C 1.34779 * 120.00332 * 180.02562 * 11 10 5 13 13 O 1.21588 * 119.99409 * 0.02562 * 12 11 10 14 14 C 1.47641 * 119.99902 * 180.02562 * 12 11 10 15 15 C 1.40007 * 119.89752 * 359.72103 * 14 12 11 16 16 C 1.36322 * 120.10317 * 179.75899 * 15 14 12 17 17 C 1.40882 * 119.89435 * 0.52022 * 16 15 14 18 18 C 1.41105 * 120.10429 * 179.71656 * 17 16 15 19 19 H 1.08007 * 119.99953 * 209.83788 * 18 17 16 20 20 C 1.40221 * 120.00297 * 29.83800 * 18 17 16 21 21 N 1.30648 * 120.00203 * 9.66783 * 20 18 17 22 22 Si 1.86803 * 120.00048 * 189.66875 * 20 18 17 23 23 H 1.48496 * 109.47143 * 359.97438 * 22 20 18 24 24 H 1.48503 * 109.47034 * 120.00075 * 22 20 18 25 25 H 1.48504 * 109.47173 * 239.99434 * 22 20 18 26 26 C 1.40894 * 119.79323 * 359.73398 * 17 16 15 27 27 C 1.36320 * 119.89076 * 0.02562 * 26 17 16 28 28 H 1.09004 * 109.46931 * 197.35330 * 1 2 3 29 29 H 1.08994 * 109.47296 * 317.35402 * 1 2 3 30 30 H 1.09001 * 109.47226 * 77.35724 * 1 2 3 31 31 H 1.09008 * 109.47306 * 119.99730 * 2 1 3 32 32 H 1.08998 * 109.47132 * 59.99786 * 3 2 1 33 33 H 1.08996 * 109.47652 * 179.97438 * 3 2 1 34 34 H 1.08998 * 109.46821 * 300.00242 * 3 2 1 35 35 H 1.09000 * 109.46816 * 55.06516 * 4 2 1 36 36 H 1.08999 * 109.47629 * 175.06763 * 4 2 1 37 37 H 1.08994 * 109.46758 * 186.37749 * 7 5 4 38 38 H 1.09003 * 109.46683 * 306.37929 * 7 5 4 39 39 H 1.08999 * 109.47105 * 302.60558 * 8 7 5 40 40 H 1.08997 * 109.47038 * 62.60712 * 8 7 5 41 41 H 0.96694 * 113.99770 * 180.02562 * 9 8 7 42 42 H 1.08994 * 109.47142 * 301.42640 * 10 5 4 43 43 H 1.08995 * 109.46659 * 61.43048 * 10 5 4 44 44 H 0.97009 * 120.00280 * 0.02562 * 11 10 5 45 45 H 1.07998 * 119.94869 * 0.02562 * 15 14 12 46 46 H 1.08004 * 120.05402 * 180.23523 * 16 15 14 47 47 H 0.96990 * 120.00503 * 180.02562 * 21 20 18 48 48 H 1.07996 * 120.05178 * 179.97438 * 26 17 16 49 49 H 1.07995 * 119.94927 * 179.97438 * 27 26 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2491 5 6 1.6339 -2.1952 -1.1886 6 1 1.7256 -2.5555 -0.1640 7 6 2.5489 -3.0143 -2.1012 8 6 3.9740 -2.9949 -1.5447 9 8 4.8404 -3.7088 -2.4289 10 6 0.1839 -2.3441 -1.6537 11 7 -0.2159 -3.7506 -1.5635 12 6 -1.4603 -4.1220 -1.9242 13 8 -2.2509 -3.2898 -2.3250 14 6 -1.8632 -5.5394 -1.8327 15 6 -0.9491 -6.4968 -1.3764 16 6 -1.3183 -7.8059 -1.2856 17 6 -2.6184 -8.1966 -1.6621 18 6 -3.0033 -9.5513 -1.5755 19 1 -3.7407 -9.9479 -2.2579 20 6 -2.4286 -10.3828 -0.6037 21 7 -1.6835 -9.8685 0.3383 22 14 -2.7281 -12.2259 -0.6558 23 1 -3.6002 -12.5532 -1.8122 24 1 -1.4307 -12.9345 -0.7974 25 1 -3.3918 -12.6553 0.6014 26 6 -3.5331 -7.2303 -2.1257 27 6 -3.1564 -5.9228 -2.2084 28 1 -0.3633 -0.9809 0.3065 29 1 -0.3633 0.7559 0.6962 30 1 -0.3634 0.2249 -1.0027 31 1 1.8933 -0.5138 0.8901 32 1 1.6766 1.9563 0.8899 33 1 3.1299 1.4425 0.0005 34 1 1.6766 1.9562 -0.8900 35 1 1.6063 -0.2611 -2.1369 36 1 3.1264 -0.6454 -1.2944 37 1 2.1905 -4.0426 -2.1466 38 1 2.5439 -2.5831 -3.1023 39 1 4.3153 -1.9635 -1.4559 40 1 3.9870 -3.4678 -0.5628 41 1 5.7621 -3.7377 -2.1380 42 1 -0.4650 -1.7406 -1.0192 43 1 0.0973 -2.0074 -2.6867 44 1 0.4150 -4.4147 -1.2441 45 1 0.0486 -6.1970 -1.0919 46 1 -0.6137 -8.5432 -0.9299 47 1 -1.2857 -10.4436 1.0103 48 1 -4.5307 -7.5253 -2.4158 49 1 -3.8566 -5.1815 -2.5640 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000270379340.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:41:15 Heat of formation + Delta-G solvation = -99.789515 kcal Electronic energy + Delta-G solvation = -26609.180459 eV Core-core repulsion = 22920.622063 eV Total energy + Delta-G solvation = -3688.558397 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 319.193 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -39.50979 -38.33567 -37.04414 -36.73536 -34.60370 -33.79825 -32.64096 -30.26482 -29.43556 -28.69761 -27.40813 -26.56936 -25.29171 -23.13870 -21.86187 -20.93398 -20.41758 -20.30032 -19.41561 -17.62713 -17.48246 -16.79919 -15.85507 -15.63364 -15.58671 -15.23821 -14.74004 -14.25097 -14.01544 -13.98031 -13.84811 -13.50177 -13.16278 -12.85507 -12.70609 -12.49794 -12.48678 -12.27740 -12.13455 -12.04168 -11.85726 -11.67969 -11.42286 -11.25854 -11.01133 -10.99214 -10.89955 -10.80515 -10.68754 -10.60040 -10.39805 -10.04389 -9.97161 -9.52059 -9.41884 -8.94519 -8.48083 -7.70394 -7.45904 -6.94182 -4.59400 2.23937 2.93517 2.97417 3.02691 3.04037 3.77887 3.84124 3.91192 3.97184 4.47781 4.57952 4.62254 4.70776 4.82916 4.94431 5.08901 5.19440 5.21722 5.32238 5.40667 5.45856 5.56553 5.56889 5.60042 5.69201 5.72204 5.77574 5.83203 5.90778 6.00914 6.04112 6.06025 6.14917 6.17063 6.27505 6.32637 6.32910 6.78452 6.87408 6.97019 7.08376 7.15360 7.42458 7.46982 7.66050 7.80649 7.88670 8.10403 8.26286 8.43677 8.66764 8.77049 9.10232 9.97745 Molecular weight = 319.19amu Principal moments of inertia in cm(-1) A = 0.015383 B = 0.002698 C = 0.002451 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1819.803940 B =10374.707399 C =11419.027586 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C -0.097 4.097 3 C -0.147 4.147 4 C -0.111 4.111 5 C -0.096 4.096 6 H 0.078 0.922 7 C -0.119 4.119 8 C 0.074 3.926 9 O -0.574 6.574 10 C 0.110 3.890 11 N -0.741 5.741 12 C 0.571 3.429 13 O -0.576 6.576 14 C -0.277 4.277 15 C -0.066 4.066 16 C -0.170 4.170 17 C 0.129 3.871 18 C -0.446 4.446 19 H 0.084 0.916 20 C 0.072 3.928 21 N -0.784 5.784 22 Si 0.916 3.084 23 H -0.258 1.258 24 H -0.270 1.270 25 H -0.272 1.272 26 C -0.234 4.234 27 C -0.026 4.026 28 H 0.066 0.934 29 H 0.052 0.948 30 H 0.060 0.940 31 H 0.069 0.931 32 H 0.053 0.947 33 H 0.051 0.949 34 H 0.054 0.946 35 H 0.068 0.932 36 H 0.068 0.932 37 H 0.074 0.926 38 H 0.072 0.928 39 H 0.047 0.953 40 H 0.045 0.955 41 H 0.377 0.623 42 H 0.085 0.915 43 H 0.059 0.941 44 H 0.396 0.604 45 H 0.088 0.912 46 H 0.122 0.878 47 H 0.284 0.716 48 H 0.099 0.901 49 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 12.164 13.018 1.828 17.910 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.214 4.214 2 C -0.115 4.115 3 C -0.204 4.204 4 C -0.149 4.149 5 C -0.115 4.115 6 H 0.097 0.903 7 C -0.156 4.156 8 C -0.004 4.004 9 O -0.379 6.379 10 C -0.013 4.013 11 N -0.395 5.395 12 C 0.365 3.635 13 O -0.458 6.458 14 C -0.281 4.281 15 C -0.085 4.085 16 C -0.189 4.189 17 C 0.126 3.874 18 C -0.475 4.475 19 H 0.102 0.898 20 C -0.148 4.148 21 N -0.408 5.408 22 Si 0.740 3.260 23 H -0.182 1.182 24 H -0.195 1.195 25 H -0.197 1.197 26 C -0.254 4.254 27 C -0.045 4.045 28 H 0.085 0.915 29 H 0.071 0.929 30 H 0.079 0.921 31 H 0.088 0.912 32 H 0.072 0.928 33 H 0.071 0.929 34 H 0.073 0.927 35 H 0.087 0.913 36 H 0.086 0.914 37 H 0.093 0.907 38 H 0.091 0.909 39 H 0.065 0.935 40 H 0.063 0.937 41 H 0.224 0.776 42 H 0.103 0.897 43 H 0.077 0.923 44 H 0.231 0.769 45 H 0.106 0.894 46 H 0.140 0.860 47 H 0.095 0.905 48 H 0.117 0.883 49 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 11.177 13.481 1.428 17.570 hybrid contribution 0.809 -1.078 0.679 1.510 sum 11.987 12.403 2.107 17.377 Atomic orbital electron populations 1.22188 0.95040 1.02086 1.02132 1.21172 0.96190 0.96003 0.98172 1.21854 1.00628 0.96181 1.01771 1.21794 1.00930 0.93868 0.98328 1.21376 0.94383 0.95709 0.99987 0.90341 1.21582 0.92554 1.01581 0.99915 1.22299 0.90803 0.94899 0.92357 1.86513 1.22491 1.77790 1.51145 1.21823 0.93990 0.83849 1.01686 1.45969 1.14926 1.08859 1.69727 1.18572 0.80414 0.89093 0.75424 1.90629 1.52116 1.54009 1.49036 1.18970 0.97547 0.90928 1.20683 1.20497 0.96304 0.93914 0.97788 1.21037 0.96953 0.94690 1.06246 1.17816 0.90430 0.92782 0.86412 1.19838 1.19940 0.94106 1.13607 0.89834 1.26059 0.92956 1.01707 0.94057 1.69712 1.23436 1.37960 1.09705 0.86130 0.79340 0.81112 0.79462 1.18200 1.19528 1.19730 1.20793 0.99019 0.92637 1.12903 1.20378 0.93944 0.95459 0.94746 0.91483 0.92923 0.92141 0.91245 0.92785 0.92949 0.92670 0.91326 0.91358 0.90709 0.90949 0.93507 0.93692 0.77646 0.89714 0.92305 0.76865 0.89375 0.85984 0.90487 0.88329 0.88076 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -1.51 7.57 37.15 0.28 -1.23 16 2 C -0.10 -0.79 2.86 -90.63 -0.26 -1.05 16 3 C -0.15 -1.05 9.12 37.16 0.34 -0.71 16 4 C -0.11 -0.94 4.33 -26.73 -0.12 -1.05 16 5 C -0.10 -0.97 1.78 -90.62 -0.16 -1.13 16 6 H 0.08 0.77 7.88 -51.93 -0.41 0.36 16 7 C -0.12 -1.28 4.96 -26.73 -0.13 -1.42 16 8 C 0.07 0.67 6.91 37.16 0.26 0.93 16 9 O -0.57 -5.93 13.66 -35.23 -0.48 -6.42 16 10 C 0.11 1.50 4.58 -4.04 -0.02 1.48 16 11 N -0.74 -12.35 5.15 -61.32 -0.32 -12.66 16 12 C 0.57 12.20 7.76 -12.42 -0.10 12.11 16 13 O -0.58 -13.77 16.32 5.29 0.09 -13.68 16 14 C -0.28 -6.38 5.89 -104.73 -0.62 -6.99 16 15 C -0.07 -1.47 9.47 -39.61 -0.38 -1.85 16 16 C -0.17 -4.20 8.59 -39.27 -0.34 -4.54 16 17 C 0.13 3.31 5.55 -106.80 -0.59 2.72 16 18 C -0.45 -11.24 9.05 -37.75 -0.34 -11.58 16 19 H 0.08 2.02 7.87 -52.48 -0.41 1.60 16 20 C 0.07 1.69 5.27 -17.31 -0.09 1.60 16 21 N -0.78 -19.04 10.84 55.56 0.60 -18.44 16 22 Si 0.92 17.62 29.57 -169.99 -5.03 12.59 16 23 H -0.26 -4.94 7.11 56.52 0.40 -4.54 16 24 H -0.27 -5.10 7.11 56.52 0.40 -4.70 16 25 H -0.27 -5.18 7.11 56.52 0.40 -4.77 16 26 C -0.23 -5.72 9.73 -39.27 -0.38 -6.10 16 27 C -0.03 -0.62 9.52 -39.61 -0.38 -1.00 16 28 H 0.07 0.73 6.15 -51.93 -0.32 0.41 16 29 H 0.05 0.46 8.02 -51.93 -0.42 0.05 16 30 H 0.06 0.61 7.51 -51.93 -0.39 0.22 16 31 H 0.07 0.56 8.03 -51.92 -0.42 0.14 16 32 H 0.05 0.37 8.14 -51.93 -0.42 -0.05 16 33 H 0.05 0.34 8.14 -51.93 -0.42 -0.09 16 34 H 0.05 0.39 8.14 -51.93 -0.42 -0.03 16 35 H 0.07 0.61 7.87 -51.93 -0.41 0.20 16 36 H 0.07 0.51 5.96 -51.93 -0.31 0.20 16 37 H 0.07 0.93 6.80 -51.93 -0.35 0.58 16 38 H 0.07 0.83 8.14 -51.93 -0.42 0.41 16 39 H 0.05 0.35 6.21 -51.93 -0.32 0.03 16 40 H 0.04 0.38 8.14 -51.93 -0.42 -0.05 16 41 H 0.38 2.08 9.12 45.56 0.42 2.50 16 42 H 0.09 1.18 3.88 -51.93 -0.20 0.98 16 43 H 0.06 0.87 8.14 -51.93 -0.42 0.44 16 44 H 0.40 6.01 5.41 -40.82 -0.22 5.79 16 45 H 0.09 1.68 6.37 -52.49 -0.33 1.35 16 46 H 0.12 3.07 6.25 -52.48 -0.33 2.74 16 47 H 0.28 6.22 8.29 -40.82 -0.34 5.88 16 48 H 0.10 2.25 8.06 -52.49 -0.42 1.82 16 49 H 0.10 2.33 7.63 -52.49 -0.40 1.93 16 LS Contribution 385.95 15.07 5.82 5.82 Total: -1.00 -29.93 385.95 -9.26 -39.20 By element: Atomic # 1 Polarization: 20.32 SS G_CDS: -6.92 Total: 13.40 kcal Atomic # 6 Polarization: -16.78 SS G_CDS: -3.02 Total: -19.80 kcal Atomic # 7 Polarization: -31.39 SS G_CDS: 0.29 Total: -31.10 kcal Atomic # 8 Polarization: -19.70 SS G_CDS: -0.39 Total: -20.10 kcal Atomic # 14 Polarization: 17.62 SS G_CDS: -5.03 Total: 12.59 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -29.93 -9.26 -39.20 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000270379340.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.593 kcal (2) G-P(sol) polarization free energy of solvation -29.935 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.528 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.261 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.196 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.790 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds