Wall clock time and date at job start Tue Mar 31 2020 13:28:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52998 * 109.47458 * 2 1 4 4 C 1.53004 * 109.46982 * 120.00013 * 2 1 3 5 5 H 1.08997 * 109.47008 * 53.02506 * 4 2 1 6 6 O 1.42898 * 109.47275 * 293.01864 * 4 2 1 7 7 C 1.53008 * 109.47116 * 173.02008 * 4 2 1 8 8 C 1.52995 * 109.46818 * 307.54673 * 7 4 2 9 9 C 1.53001 * 109.46650 * 67.54228 * 7 4 2 10 10 C 1.52999 * 109.46998 * 187.54414 * 7 4 2 11 11 N 1.46501 * 109.46656 * 180.02562 * 10 7 4 12 12 C 1.34775 * 119.99349 * 179.97438 * 11 10 7 13 13 O 1.21588 * 120.00750 * 0.02562 * 12 11 10 14 14 C 1.47643 * 119.99656 * 179.97438 * 12 11 10 15 15 C 1.40016 * 119.89797 * 359.73172 * 14 12 11 16 16 C 1.36314 * 120.11028 * 179.71709 * 15 14 12 17 17 C 1.40889 * 119.89027 * 0.57504 * 16 15 14 18 18 C 1.41108 * 120.10691 * 179.67348 * 17 16 15 19 19 H 1.07996 * 120.00330 * 210.88142 * 18 17 16 20 20 C 1.40233 * 119.99738 * 30.88450 * 18 17 16 21 21 N 1.30648 * 119.99515 * 8.15382 * 20 18 17 22 22 Si 1.86790 * 120.00103 * 188.15358 * 20 18 17 23 23 H 1.48503 * 109.47081 * 60.00046 * 22 20 18 24 24 H 1.48502 * 109.47261 * 179.97438 * 22 20 18 25 25 H 1.48502 * 109.47243 * 299.99959 * 22 20 18 26 26 C 1.40892 * 119.79394 * 359.69769 * 17 16 15 27 27 C 1.36320 * 119.89172 * 359.97438 * 26 17 16 28 28 H 1.08997 * 109.46959 * 300.00356 * 1 2 3 29 29 H 1.08994 * 109.46874 * 59.99975 * 1 2 3 30 30 H 1.08997 * 109.47541 * 180.02562 * 1 2 3 31 31 H 1.09006 * 109.46972 * 239.99430 * 2 1 3 32 32 H 1.08999 * 109.47293 * 84.92264 * 3 2 1 33 33 H 1.08995 * 109.47181 * 204.92385 * 3 2 1 34 34 H 1.09003 * 109.46994 * 324.91791 * 3 2 1 35 35 H 0.96695 * 113.99987 * 300.00694 * 6 4 2 36 36 H 1.08996 * 109.47864 * 60.00307 * 8 7 4 37 37 H 1.09009 * 109.46959 * 179.97438 * 8 7 4 38 38 H 1.09000 * 109.47363 * 299.99097 * 8 7 4 39 39 H 1.08999 * 109.47130 * 35.42434 * 9 7 4 40 40 H 1.09007 * 109.46519 * 155.41642 * 9 7 4 41 41 H 1.08994 * 109.47472 * 275.41523 * 9 7 4 42 42 H 1.09001 * 109.47133 * 300.00112 * 10 7 4 43 43 H 1.09000 * 109.47003 * 59.99915 * 10 7 4 44 44 H 0.96992 * 120.00265 * 359.97438 * 11 10 7 45 45 H 1.07998 * 119.94154 * 359.97438 * 15 14 12 46 46 H 1.07997 * 120.05971 * 180.24765 * 16 15 14 47 47 H 0.97009 * 119.99494 * 179.97438 * 21 20 18 48 48 H 1.07996 * 120.05849 * 179.97438 * 26 17 16 49 49 H 1.07993 * 119.94684 * 180.02562 * 27 26 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0400 -0.7213 1.2493 5 1 1.5783 -1.7065 1.3138 6 8 1.7020 0.0402 2.4103 7 6 3.5600 -0.8749 1.1647 8 6 3.9334 -1.5240 -0.1694 9 6 4.2180 0.5029 1.2635 10 6 4.0482 -1.7570 2.3156 11 7 5.5036 -1.9035 2.2349 12 6 6.1581 -2.6430 3.1521 13 8 5.5408 -3.1888 4.0461 14 6 7.6249 -2.7912 3.0706 15 6 8.3329 -2.1672 2.0363 16 6 9.6878 -2.2964 1.9602 17 6 10.3743 -3.0693 2.9174 18 6 11.7760 -3.2117 2.8390 19 1 12.2472 -4.1178 3.1901 20 6 12.5571 -2.1767 2.3050 21 7 12.0111 -1.0224 2.0284 22 14 14.3780 -2.4482 1.9895 23 1 14.5522 -3.5635 1.0246 24 1 14.9730 -1.2096 1.4263 25 1 15.0564 -2.7877 3.2661 26 6 9.6568 -3.7000 3.9530 27 6 8.3028 -3.5595 4.0248 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3634 -1.0276 0.0005 31 1 1.8933 -0.5140 -0.8900 32 1 2.0755 1.8153 1.0236 33 1 3.0398 1.4743 -0.4330 34 1 1.3683 2.0654 -0.5907 35 1 2.0797 0.9303 2.4205 36 1 3.5857 -0.8957 -0.9893 37 1 5.0164 -1.6331 -0.2298 38 1 3.4647 -2.5056 -0.2397 39 1 3.6465 1.1303 1.9475 40 1 5.2365 0.3931 1.6361 41 1 4.2398 0.9666 0.2773 42 1 3.7820 -1.2945 3.2660 43 1 3.5793 -2.7385 2.2452 44 1 5.9961 -1.4684 1.5216 45 1 7.8052 -1.5791 1.3000 46 1 10.2336 -1.8114 1.1644 47 1 12.5515 -0.3063 1.6594 48 1 10.1787 -4.2938 4.6888 49 1 7.7520 -4.0422 4.8185 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000270593251.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:28:33 Heat of formation + Delta-G solvation = -81.967624 kcal Electronic energy + Delta-G solvation = -27155.691883 eV Core-core repulsion = 23467.906302 eV Total energy + Delta-G solvation = -3687.785582 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 319.193 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -40.42089 -38.87758 -37.12442 -35.49197 -34.12878 -33.80676 -32.42017 -30.14645 -29.45570 -28.77523 -27.08682 -26.43125 -26.18820 -24.96027 -21.95146 -20.98061 -20.46791 -19.65333 -19.23044 -17.52664 -17.36588 -16.62435 -16.20824 -15.65791 -15.36260 -15.10559 -14.70216 -14.47999 -14.01139 -13.69073 -13.53476 -13.23211 -13.12570 -12.85972 -12.74038 -12.56476 -12.47879 -12.30191 -12.08552 -12.00424 -11.92233 -11.81233 -11.63751 -11.43149 -11.25225 -11.04882 -10.98772 -10.94539 -10.65773 -10.60241 -10.53504 -10.01403 -9.84382 -9.53228 -9.43259 -8.95044 -8.53704 -7.72742 -7.46804 -6.94534 -4.61353 2.22559 2.95279 2.95661 2.98364 3.01377 3.75469 3.76695 3.90985 4.19048 4.41313 4.48280 4.56609 4.61101 4.69648 4.77784 4.95139 5.12325 5.28866 5.35113 5.42303 5.49324 5.50613 5.54521 5.60992 5.65655 5.67019 5.74264 5.81549 5.89751 5.93874 5.99749 6.03007 6.05430 6.14122 6.23390 6.28085 6.31139 6.76354 6.86125 6.95107 7.06213 7.13369 7.45018 7.45791 7.63866 7.78140 7.86389 8.08762 8.24815 8.41545 8.65029 8.74991 9.09201 9.97365 Molecular weight = 319.19amu Principal moments of inertia in cm(-1) A = 0.022653 B = 0.002560 C = 0.002380 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1235.730601 B =10934.595261 C =11762.957795 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.131 4.131 3 C -0.162 4.162 4 C 0.124 3.876 5 H 0.101 0.899 6 O -0.557 6.557 7 C -0.105 4.105 8 C -0.146 4.146 9 C -0.161 4.161 10 C 0.138 3.862 11 N -0.739 5.739 12 C 0.570 3.430 13 O -0.574 6.574 14 C -0.275 4.275 15 C -0.067 4.067 16 C -0.169 4.169 17 C 0.129 3.871 18 C -0.448 4.448 19 H 0.083 0.917 20 C 0.072 3.928 21 N -0.786 5.786 22 Si 0.917 3.083 23 H -0.262 1.262 24 H -0.276 1.276 25 H -0.263 1.263 26 C -0.233 4.233 27 C -0.027 4.027 28 H 0.060 0.940 29 H 0.052 0.948 30 H 0.053 0.947 31 H 0.084 0.916 32 H 0.056 0.944 33 H 0.070 0.930 34 H 0.054 0.946 35 H 0.370 0.630 36 H 0.063 0.937 37 H 0.062 0.938 38 H 0.059 0.941 39 H 0.057 0.943 40 H 0.064 0.936 41 H 0.072 0.928 42 H 0.067 0.933 43 H 0.059 0.941 44 H 0.396 0.604 45 H 0.087 0.913 46 H 0.123 0.877 47 H 0.285 0.715 48 H 0.099 0.901 49 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.254 6.102 -8.199 17.540 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.149 4.149 3 C -0.218 4.218 4 C 0.064 3.936 5 H 0.118 0.882 6 O -0.366 6.366 7 C -0.106 4.106 8 C -0.203 4.203 9 C -0.218 4.218 10 C 0.014 3.986 11 N -0.393 5.393 12 C 0.364 3.636 13 O -0.456 6.456 14 C -0.280 4.280 15 C -0.086 4.086 16 C -0.188 4.188 17 C 0.126 3.874 18 C -0.476 4.476 19 H 0.101 0.899 20 C -0.148 4.148 21 N -0.410 5.410 22 Si 0.741 3.259 23 H -0.186 1.186 24 H -0.201 1.201 25 H -0.188 1.188 26 C -0.252 4.252 27 C -0.046 4.046 28 H 0.079 0.921 29 H 0.071 0.929 30 H 0.072 0.928 31 H 0.103 0.897 32 H 0.075 0.925 33 H 0.088 0.912 34 H 0.073 0.927 35 H 0.222 0.778 36 H 0.081 0.919 37 H 0.081 0.919 38 H 0.078 0.922 39 H 0.076 0.924 40 H 0.083 0.917 41 H 0.090 0.910 42 H 0.085 0.915 43 H 0.078 0.922 44 H 0.232 0.768 45 H 0.105 0.895 46 H 0.140 0.860 47 H 0.096 0.904 48 H 0.117 0.883 49 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -14.960 5.437 -7.503 17.597 hybrid contribution 1.388 0.757 -0.671 1.717 sum -13.572 6.194 -8.174 17.011 Atomic orbital electron populations 1.21801 0.94703 1.01807 1.01789 1.21869 0.96558 0.97157 0.99347 1.22313 1.01799 0.95818 1.01892 1.21920 0.92016 0.95107 0.84561 0.88164 1.86624 1.76600 1.30527 1.42820 1.21445 0.96400 0.96494 0.96273 1.21983 1.02255 1.00673 0.95401 1.22419 1.01471 0.95581 1.02328 1.21124 0.81276 0.98626 0.97603 1.45969 1.07060 1.54315 1.31973 1.18587 0.88087 0.76804 0.80140 1.90642 1.69748 1.49449 1.35747 1.18977 0.90444 1.13997 1.04535 1.20485 0.94889 0.97381 0.95851 1.21038 0.92229 1.04581 1.00942 1.17812 0.93223 0.88079 0.88305 1.19765 0.91760 1.01940 1.34183 0.89931 1.26051 1.01827 0.94332 0.92555 1.69698 1.38647 1.02448 1.30251 0.86211 0.80930 0.78861 0.79906 1.18642 1.20131 1.18753 1.20805 0.93541 1.09729 1.01135 1.20390 0.93923 0.94564 0.95733 0.92140 0.92927 0.92807 0.89739 0.92513 0.91168 0.92708 0.77813 0.91863 0.91947 0.92196 0.92412 0.91690 0.90954 0.91455 0.92244 0.76777 0.89457 0.85965 0.90403 0.88303 0.88045 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.05 8.97 37.16 0.33 -0.72 16 2 C -0.13 -0.96 2.40 -90.62 -0.22 -1.18 16 3 C -0.16 -1.06 7.84 37.16 0.29 -0.77 16 4 C 0.12 1.14 2.25 -26.72 -0.06 1.08 16 5 H 0.10 0.99 8.13 -51.93 -0.42 0.56 16 6 O -0.56 -5.82 12.40 -35.23 -0.44 -6.26 16 7 C -0.11 -1.05 0.40 -154.51 -0.06 -1.11 16 8 C -0.15 -1.34 7.62 37.16 0.28 -1.06 16 9 C -0.16 -1.49 7.15 37.16 0.27 -1.22 16 10 C 0.14 1.96 4.47 -4.04 -0.02 1.94 16 11 N -0.74 -12.19 4.64 -61.31 -0.28 -12.48 16 12 C 0.57 12.19 7.76 -12.42 -0.10 12.09 16 13 O -0.57 -13.94 16.32 5.29 0.09 -13.85 16 14 C -0.28 -6.28 5.89 -104.72 -0.62 -6.90 16 15 C -0.07 -1.47 9.47 -39.61 -0.38 -1.84 16 16 C -0.17 -4.10 8.58 -39.27 -0.34 -4.44 16 17 C 0.13 3.28 5.54 -106.80 -0.59 2.69 16 18 C -0.45 -11.18 9.05 -37.74 -0.34 -11.52 16 19 H 0.08 1.96 7.86 -52.49 -0.41 1.55 16 20 C 0.07 1.68 5.29 -17.31 -0.09 1.59 16 21 N -0.79 -18.94 10.84 55.56 0.60 -18.34 16 22 Si 0.92 17.48 29.57 -169.99 -5.03 12.46 16 23 H -0.26 -4.94 7.11 56.52 0.40 -4.54 16 24 H -0.28 -5.13 7.11 56.52 0.40 -4.73 16 25 H -0.26 -5.00 7.11 56.52 0.40 -4.60 16 26 C -0.23 -5.65 9.73 -39.27 -0.38 -6.03 16 27 C -0.03 -0.64 9.52 -39.60 -0.38 -1.01 16 28 H 0.06 0.48 7.88 -51.93 -0.41 0.08 16 29 H 0.05 0.34 8.12 -51.93 -0.42 -0.08 16 30 H 0.05 0.39 8.14 -51.93 -0.42 -0.03 16 31 H 0.08 0.59 5.91 -51.93 -0.31 0.28 16 32 H 0.06 0.36 4.89 -51.93 -0.25 0.10 16 33 H 0.07 0.44 5.40 -51.93 -0.28 0.16 16 34 H 0.05 0.34 7.89 -51.93 -0.41 -0.07 16 35 H 0.37 3.04 4.74 45.56 0.22 3.25 16 36 H 0.06 0.47 6.14 -51.93 -0.32 0.15 16 37 H 0.06 0.63 6.86 -51.92 -0.36 0.27 16 38 H 0.06 0.55 8.14 -51.93 -0.42 0.13 16 39 H 0.06 0.48 4.91 -51.93 -0.25 0.22 16 40 H 0.06 0.72 6.54 -51.93 -0.34 0.38 16 41 H 0.07 0.55 5.10 -51.93 -0.26 0.29 16 42 H 0.07 1.07 7.90 -51.93 -0.41 0.66 16 43 H 0.06 0.90 8.14 -51.93 -0.42 0.48 16 44 H 0.40 5.85 4.34 -40.82 -0.18 5.67 16 45 H 0.09 1.61 6.37 -52.49 -0.33 1.28 16 46 H 0.12 3.02 6.27 -52.49 -0.33 2.69 16 47 H 0.28 6.23 8.29 -40.82 -0.34 5.89 16 48 H 0.10 2.24 8.06 -52.49 -0.42 1.82 16 49 H 0.10 2.34 7.63 -52.49 -0.40 1.94 16 LS Contribution 370.70 15.07 5.59 5.59 Total: -1.00 -28.90 370.70 -8.58 -37.48 By element: Atomic # 1 Polarization: 20.52 SS G_CDS: -6.71 Total: 13.80 kcal Atomic # 6 Polarization: -16.01 SS G_CDS: -2.39 Total: -18.40 kcal Atomic # 7 Polarization: -31.13 SS G_CDS: 0.32 Total: -30.81 kcal Atomic # 8 Polarization: -19.76 SS G_CDS: -0.35 Total: -20.11 kcal Atomic # 14 Polarization: 17.48 SS G_CDS: -5.03 Total: 12.46 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -28.90 -8.58 -37.48 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000270593251.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.492 kcal (2) G-P(sol) polarization free energy of solvation -28.897 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.389 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.579 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.476 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.968 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds