Wall clock time and date at job start Tue Mar 31 2020 12:26:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42900 * 113.99806 * 2 1 4 4 C 1.53001 * 109.46629 * 180.02562 * 3 2 1 5 5 C 1.53006 * 109.46998 * 300.00008 * 3 2 1 6 6 N 1.46502 * 109.47101 * 300.00350 * 5 3 2 7 7 C 1.39663 * 119.99806 * 180.02562 * 6 5 3 8 8 C 1.38973 * 120.04649 * 0.02562 * 7 6 5 9 9 C 1.38116 * 120.03003 * 179.97438 * 8 7 6 10 10 C 1.38216 * 120.13578 * 359.74695 * 9 8 7 11 11 C 1.38779 * 120.08401 * 0.51068 * 10 9 8 12 12 O 1.35897 * 120.00949 * 179.76812 * 11 10 9 13 13 C 1.42898 * 117.00481 * 359.71829 * 12 11 10 14 14 C 1.52997 * 109.47319 * 180.02562 * 13 12 11 15 15 C 1.50697 * 109.47466 * 180.02562 * 14 13 12 16 16 H 1.08001 * 119.99890 * 0.02562 * 15 14 13 17 17 C 1.37876 * 120.00428 * 179.97438 * 15 14 13 18 18 N 1.31519 * 119.99563 * 0.02562 * 17 15 14 19 19 Si 1.86800 * 120.00432 * 179.97438 * 17 15 14 20 20 H 1.48503 * 109.46756 * 59.99920 * 19 17 15 21 21 H 1.48490 * 109.47381 * 179.97438 * 19 17 15 22 22 H 1.48496 * 109.47117 * 300.00527 * 19 17 15 23 23 C 1.38609 * 119.96517 * 359.48769 * 11 10 9 24 24 C 1.52994 * 109.47360 * 60.00143 * 3 2 1 25 25 C 1.53002 * 117.50138 * 133.62078 * 24 3 2 26 26 C 1.53003 * 60.00013 * 252.50994 * 25 24 3 27 27 H 1.09004 * 109.47445 * 299.99771 * 1 2 3 28 28 H 1.08996 * 109.47616 * 60.00168 * 1 2 3 29 29 H 1.09004 * 109.47075 * 180.02562 * 1 2 3 30 30 H 1.09001 * 109.47042 * 179.97438 * 4 3 2 31 31 H 1.09005 * 109.46934 * 299.99443 * 4 3 2 32 32 H 1.08995 * 109.47804 * 59.99593 * 4 3 2 33 33 H 1.09001 * 109.46841 * 180.02562 * 5 3 2 34 34 H 1.09000 * 109.46674 * 60.00114 * 5 3 2 35 35 H 0.97001 * 119.99801 * 359.97438 * 6 5 3 36 36 H 1.07996 * 119.98339 * 359.95966 * 8 7 6 37 37 H 1.08007 * 119.92769 * 180.02562 * 9 8 7 38 38 H 1.07991 * 119.95689 * 180.26971 * 10 9 8 39 39 H 1.09002 * 109.47259 * 300.00417 * 13 12 11 40 40 H 1.09001 * 109.47074 * 60.00439 * 13 12 11 41 41 H 1.09002 * 109.47153 * 300.00307 * 14 13 12 42 42 H 1.08998 * 109.47533 * 59.99936 * 14 13 12 43 43 H 0.97002 * 119.99731 * 180.02562 * 18 17 15 44 44 H 1.08006 * 120.06150 * 180.23058 * 23 11 10 45 45 H 1.09003 * 115.55211 * 279.32840 * 24 3 2 46 46 H 1.09005 * 117.49527 * 359.97438 * 25 24 3 47 47 H 1.08989 * 117.50221 * 145.02039 * 25 24 3 48 48 H 1.09001 * 117.50096 * 252.50736 * 26 25 24 49 49 H 1.09004 * 117.49982 * 107.48481 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1846 -0.0006 5 6 1.5587 2.0647 -1.2493 6 7 1.9909 1.3377 -2.4455 7 6 1.6926 1.8402 -3.7139 8 6 0.9863 3.0302 -3.8425 9 6 0.6920 3.5272 -5.0971 10 6 1.1031 2.8460 -6.2273 11 6 1.8041 1.6545 -6.1050 12 8 2.2034 0.9835 -7.2173 13 6 1.8622 1.5593 -8.4798 14 6 2.3912 0.6690 -9.6060 15 6 2.0319 1.2765 -10.9375 16 1 1.4817 2.2050 -10.9766 17 6 2.4065 0.6475 -12.1059 18 7 3.0770 -0.4829 -12.0583 19 14 1.9606 1.4001 -13.7564 20 1 2.5687 2.7506 -13.8650 21 1 2.4752 0.5367 -14.8494 22 1 0.4840 1.5119 -13.8666 23 6 2.1016 1.1522 -4.8478 24 6 1.5588 2.0647 1.2492 25 6 2.6292 2.8123 2.0470 26 6 2.0162 1.5270 2.6066 27 1 -0.3634 0.5138 0.8900 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 3.9788 2.1804 -0.0011 31 1 3.8574 0.6436 0.8892 32 1 3.8567 0.6438 -0.8907 33 1 2.0023 3.0604 -1.2495 34 1 0.4721 2.1507 -1.2492 35 1 2.4849 0.5076 -2.3564 36 1 0.6673 3.5664 -2.9611 37 1 0.1434 4.4523 -5.1952 38 1 0.8752 3.2394 -7.2069 39 1 0.7783 1.6414 -8.5607 40 1 2.3087 2.5505 -8.5597 41 1 3.4751 0.5865 -9.5253 42 1 1.9445 -0.3220 -9.5261 43 1 3.3409 -0.9253 -12.8803 44 1 2.6503 0.2270 -4.7508 45 1 0.5669 2.5134 1.1939 46 1 3.6551 2.7627 1.6820 47 1 2.3417 3.7529 2.5165 48 1 1.3254 1.6221 3.4444 49 1 2.6387 0.6322 2.6096 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000602482415.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:26:38 Heat of formation + Delta-G solvation = -36.967260 kcal Electronic energy + Delta-G solvation = -26157.801715 eV Core-core repulsion = 22471.967496 eV Total energy + Delta-G solvation = -3685.834219 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 319.193 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -40.42521 -39.55915 -37.59230 -36.59385 -34.91950 -33.31356 -31.71790 -30.76767 -29.46777 -28.46935 -27.15967 -26.44236 -24.97652 -23.63972 -22.79597 -22.53126 -21.39092 -20.25987 -19.64855 -18.02727 -17.15397 -16.92548 -16.27506 -15.99751 -15.66948 -15.43149 -15.27398 -15.20644 -14.85028 -14.59160 -14.31193 -13.95676 -13.69122 -13.35866 -13.11666 -12.84551 -12.60637 -12.53410 -12.28411 -12.13388 -12.02214 -11.68936 -11.54596 -11.47677 -11.26319 -11.01010 -10.86581 -10.86216 -10.75005 -10.62141 -10.40533 -9.97886 -9.90138 -9.68796 -9.60923 -9.27039 -8.41599 -7.90507 -7.29460 -6.06937 -4.11376 1.75041 1.90770 2.97758 3.31020 3.31176 3.35360 3.37651 3.63113 4.00375 4.10128 4.15616 4.27304 4.41491 4.45427 4.52411 4.62582 4.82912 5.03780 5.09227 5.11666 5.14590 5.22895 5.27912 5.29240 5.34365 5.37618 5.39327 5.47177 5.52064 5.58156 5.60874 5.64204 5.68061 5.81670 5.83815 6.11629 6.12571 6.15978 6.43828 6.65826 6.69853 6.78269 6.82155 6.92672 7.41295 7.55733 7.69011 7.72084 7.87191 8.15679 8.28475 8.94075 9.52554 11.04612 Molecular weight = 319.19amu Principal moments of inertia in cm(-1) A = 0.033121 B = 0.001911 C = 0.001876 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 845.189202 B =14646.252644 C =14922.557297 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.370 6.370 3 C 0.137 3.863 4 C -0.143 4.143 5 C 0.109 3.891 6 N -0.741 5.741 7 C 0.248 3.752 8 C -0.246 4.246 9 C -0.037 4.037 10 C -0.265 4.265 11 C 0.188 3.812 12 O -0.316 6.316 13 C 0.066 3.934 14 C 0.025 3.975 15 C -0.526 4.526 16 H 0.058 0.942 17 C 0.060 3.940 18 N -0.890 5.890 19 Si 0.899 3.101 20 H -0.276 1.276 21 H -0.286 1.286 22 H -0.276 1.276 23 C -0.237 4.237 24 C -0.185 4.185 25 C -0.175 4.175 26 C -0.163 4.163 27 H 0.042 0.958 28 H 0.046 0.954 29 H 0.084 0.916 30 H 0.077 0.923 31 H 0.067 0.933 32 H 0.068 0.932 33 H 0.069 0.931 34 H 0.061 0.939 35 H 0.402 0.598 36 H 0.113 0.887 37 H 0.118 0.882 38 H 0.126 0.874 39 H 0.051 0.949 40 H 0.051 0.949 41 H 0.027 0.973 42 H 0.027 0.973 43 H 0.263 0.737 44 H 0.124 0.876 45 H 0.106 0.894 46 H 0.104 0.896 47 H 0.095 0.905 48 H 0.094 0.906 49 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.622 6.303 30.592 31.443 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.289 6.289 3 C 0.097 3.903 4 C -0.200 4.200 5 C -0.016 4.016 6 N -0.373 5.373 7 C 0.145 3.855 8 C -0.268 4.268 9 C -0.056 4.056 10 C -0.285 4.285 11 C 0.140 3.860 12 O -0.229 6.229 13 C -0.008 4.008 14 C -0.012 4.012 15 C -0.564 4.564 16 H 0.076 0.924 17 C -0.142 4.142 18 N -0.528 5.528 19 Si 0.727 3.273 20 H -0.201 1.201 21 H -0.211 1.211 22 H -0.201 1.201 23 C -0.261 4.261 24 C -0.204 4.204 25 C -0.211 4.211 26 C -0.200 4.200 27 H 0.061 0.939 28 H 0.065 0.935 29 H 0.103 0.897 30 H 0.096 0.904 31 H 0.086 0.914 32 H 0.087 0.913 33 H 0.087 0.913 34 H 0.079 0.921 35 H 0.238 0.762 36 H 0.131 0.869 37 H 0.136 0.864 38 H 0.144 0.856 39 H 0.069 0.931 40 H 0.069 0.931 41 H 0.046 0.954 42 H 0.046 0.954 43 H 0.073 0.927 44 H 0.142 0.858 45 H 0.124 0.876 46 H 0.122 0.878 47 H 0.114 0.886 48 H 0.112 0.888 49 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -3.389 5.924 30.582 31.334 hybrid contribution -0.520 0.521 -0.994 1.237 sum -3.909 6.445 29.588 30.533 Atomic orbital electron populations 1.22756 0.81121 1.02811 1.00210 1.87980 1.19907 1.26290 1.94733 1.21141 0.94472 0.83262 0.91421 1.21895 0.91922 1.02926 1.03289 1.21766 0.99519 0.95909 0.84455 1.44433 1.63540 1.27753 1.01548 1.17344 0.92070 0.91814 0.84263 1.20358 1.10208 0.98719 0.97558 1.20606 0.95669 0.97781 0.91518 1.21140 1.09124 0.98482 0.99775 1.18819 0.90266 0.89765 0.87142 1.86147 1.73532 1.49469 1.13739 1.23308 0.99231 0.98301 0.79919 1.19123 0.97512 0.95096 0.89494 1.20943 1.36818 1.08442 0.90218 0.92407 1.24993 0.94940 0.94893 0.99400 1.69972 1.38045 1.16616 1.28161 0.86543 0.78833 0.79086 0.82879 1.20115 1.21143 1.20110 1.19659 1.13126 1.04352 0.88922 1.22753 0.99993 1.04711 0.92907 1.23144 0.98458 0.96251 1.03290 1.22880 1.03643 0.98022 0.95458 0.93895 0.93509 0.89717 0.90404 0.91445 0.91325 0.91321 0.92085 0.76199 0.86920 0.86441 0.85615 0.93120 0.93106 0.95434 0.95430 0.92690 0.85785 0.87567 0.87809 0.88639 0.88790 0.88273 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.21 10.31 101.05 1.04 1.25 16 2 O -0.37 -3.33 10.07 -35.23 -0.35 -3.69 16 3 C 0.14 1.01 0.61 -90.62 -0.05 0.96 16 4 C -0.14 -0.99 7.33 37.16 0.27 -0.72 16 5 C 0.11 0.92 3.45 -4.04 -0.01 0.90 16 6 N -0.74 -7.93 5.32 -58.65 -0.31 -8.24 16 7 C 0.25 3.38 6.65 -83.81 -0.56 2.82 16 8 C -0.25 -3.21 9.31 -39.35 -0.37 -3.58 16 9 C -0.04 -0.51 10.03 -39.63 -0.40 -0.91 16 10 C -0.26 -4.40 9.04 -39.39 -0.36 -4.76 16 11 C 0.19 3.47 6.68 -39.24 -0.26 3.21 16 12 O -0.32 -6.80 10.13 -19.42 -0.20 -7.00 16 13 C 0.07 1.48 4.68 37.16 0.17 1.65 16 14 C 0.02 0.67 5.34 -27.89 -0.15 0.52 16 15 C -0.53 -14.89 9.11 -34.44 -0.31 -15.21 16 16 H 0.06 1.56 7.74 -52.49 -0.41 1.15 16 17 C 0.06 1.72 5.46 -17.82 -0.10 1.62 16 18 N -0.89 -26.77 13.29 55.43 0.74 -26.03 16 19 Si 0.90 21.50 29.54 -169.99 -5.02 16.48 16 20 H -0.28 -6.45 7.11 56.52 0.40 -6.05 16 21 H -0.29 -6.75 7.11 56.52 0.40 -6.35 16 22 H -0.28 -6.45 7.11 56.52 0.40 -6.05 16 23 C -0.24 -3.84 9.83 -39.24 -0.39 -4.22 16 24 C -0.18 -1.13 4.00 -90.62 -0.36 -1.49 16 25 C -0.17 -0.91 9.65 -26.73 -0.26 -1.16 16 26 C -0.16 -0.92 9.85 -26.73 -0.26 -1.18 16 27 H 0.04 0.27 6.99 -51.93 -0.36 -0.09 16 28 H 0.05 0.38 6.42 -51.93 -0.33 0.04 16 29 H 0.08 0.58 8.14 -51.93 -0.42 0.16 16 30 H 0.08 0.47 6.75 -51.93 -0.35 0.12 16 31 H 0.07 0.44 6.96 -51.93 -0.36 0.08 16 32 H 0.07 0.53 6.86 -51.93 -0.36 0.17 16 33 H 0.07 0.56 7.95 -51.93 -0.41 0.15 16 34 H 0.06 0.52 6.35 -51.93 -0.33 0.19 16 35 H 0.40 4.20 7.20 -40.82 -0.29 3.90 16 36 H 0.11 1.22 6.73 -52.49 -0.35 0.87 16 37 H 0.12 1.32 8.06 -52.48 -0.42 0.90 16 38 H 0.13 2.07 6.29 -52.49 -0.33 1.74 16 39 H 0.05 1.07 7.67 -51.93 -0.40 0.68 16 40 H 0.05 1.08 7.65 -51.93 -0.40 0.68 16 41 H 0.03 0.78 8.14 -51.93 -0.42 0.36 16 42 H 0.03 0.78 8.14 -51.93 -0.42 0.36 16 43 H 0.26 7.45 8.31 -40.82 -0.34 7.11 16 44 H 0.12 1.93 8.06 -52.48 -0.42 1.50 16 45 H 0.11 0.61 7.90 -51.93 -0.41 0.20 16 46 H 0.10 0.51 5.89 -51.93 -0.31 0.20 16 47 H 0.10 0.43 8.14 -51.94 -0.42 0.00 16 48 H 0.09 0.46 8.14 -51.93 -0.42 0.04 16 49 H 0.10 0.60 7.29 -51.93 -0.38 0.23 16 LS Contribution 388.77 15.07 5.86 5.86 Total: -1.00 -31.14 388.77 -9.51 -40.65 By element: Atomic # 1 Polarization: 10.14 SS G_CDS: -7.87 Total: 2.27 kcal Atomic # 6 Polarization: -17.95 SS G_CDS: -2.35 Total: -20.30 kcal Atomic # 7 Polarization: -34.70 SS G_CDS: 0.42 Total: -34.27 kcal Atomic # 8 Polarization: -10.13 SS G_CDS: -0.55 Total: -10.68 kcal Atomic # 14 Polarization: 21.50 SS G_CDS: -5.02 Total: 16.48 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -31.14 -9.51 -40.65 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000602482415.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.685 kcal (2) G-P(sol) polarization free energy of solvation -31.138 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.453 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.514 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.652 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.967 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds