Wall clock time and date at job start Tue Mar 31 2020 13:42:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52991 * 1 3 3 O 1.45199 * 109.47115 * 2 1 4 4 C 1.34233 * 116.99707 * 180.02562 * 3 2 1 5 5 O 1.20828 * 120.00463 * 0.02562 * 4 3 2 6 6 C 1.50707 * 119.99811 * 179.97438 * 4 3 2 7 7 H 1.08992 * 109.47166 * 300.00438 * 6 4 3 8 8 C 1.53004 * 109.46862 * 60.00292 * 6 4 3 9 9 C 1.50702 * 109.47102 * 185.00040 * 8 6 4 10 10 C 1.38229 * 119.99619 * 269.72718 * 9 8 6 11 11 C 1.38246 * 119.99690 * 179.76271 * 10 9 8 12 12 C 1.38230 * 119.99745 * 0.50802 * 11 10 9 13 13 C 1.38238 * 120.00201 * 359.74320 * 12 11 10 14 14 C 1.38224 * 119.99918 * 0.02562 * 13 12 11 15 15 N 1.46900 * 109.46974 * 180.02562 * 6 4 3 16 16 C 1.46900 * 110.99988 * 85.00600 * 15 6 4 17 17 C 1.52996 * 109.47018 * 180.02562 * 16 15 6 18 18 C 1.53000 * 109.46934 * 299.99307 * 17 16 15 19 19 C 1.52996 * 109.47716 * 59.99377 * 17 16 15 20 20 C 1.50700 * 109.47023 * 179.97438 * 17 16 15 21 21 H 1.08002 * 120.00172 * 1.23929 * 20 17 16 22 22 C 1.37879 * 120.00005 * 181.22784 * 20 17 16 23 23 N 1.31513 * 120.00224 * 194.12015 * 22 20 17 24 24 Si 1.86805 * 119.99923 * 14.12476 * 22 20 17 25 25 H 1.48498 * 109.47180 * 84.52495 * 24 22 20 26 26 H 1.48500 * 109.46881 * 204.52674 * 24 22 20 27 27 H 1.48499 * 109.47083 * 324.52907 * 24 22 20 28 28 H 1.09000 * 109.47384 * 179.97438 * 1 2 3 29 29 H 1.09004 * 109.47148 * 299.99952 * 1 2 3 30 30 H 1.08997 * 109.47470 * 59.99825 * 1 2 3 31 31 H 1.09004 * 109.47148 * 240.00048 * 2 1 3 32 32 H 1.08997 * 109.47470 * 120.00175 * 2 1 3 33 33 H 1.09004 * 109.47005 * 304.99648 * 8 6 4 34 34 H 1.08996 * 109.47426 * 64.99775 * 8 6 4 35 35 H 1.07997 * 120.00532 * 359.97438 * 10 9 8 36 36 H 1.08000 * 120.00018 * 180.22842 * 11 10 9 37 37 H 1.08006 * 119.99874 * 179.71934 * 12 11 10 38 38 H 1.07997 * 119.99667 * 179.97438 * 13 12 11 39 39 H 1.08004 * 120.00093 * 179.97438 * 14 13 12 40 40 H 1.00904 * 110.99797 * 208.95557 * 15 6 4 41 41 H 1.08996 * 109.47285 * 59.99435 * 16 15 6 42 42 H 1.09010 * 109.46351 * 299.99485 * 16 15 6 43 43 H 1.09005 * 109.47299 * 69.52711 * 18 17 16 44 44 H 1.09002 * 109.47253 * 189.53057 * 18 17 16 45 45 H 1.09001 * 109.47140 * 309.52987 * 18 17 16 46 46 H 1.09003 * 109.46708 * 60.00075 * 19 17 16 47 47 H 1.08996 * 109.47444 * 180.02562 * 19 17 16 48 48 H 1.08999 * 109.47046 * 300.00419 * 19 17 16 49 49 H 0.97000 * 120.00247 * 180.02562 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5866 -0.0015 6 6 3.9207 2.9374 -0.0012 7 1 3.5844 3.4693 -0.8911 8 6 3.4497 3.6847 1.2481 9 6 3.9237 5.1139 1.1872 10 6 5.1469 5.4599 1.7302 11 6 5.5840 6.7701 1.6700 12 6 4.7932 7.7359 1.0762 13 6 3.5677 7.3907 0.5378 14 6 3.1327 6.0799 0.5938 15 7 5.3877 2.8605 -0.0023 16 6 5.9061 2.7135 -1.3689 17 6 7.4336 2.6363 -1.3293 18 6 7.9930 3.9171 -0.7068 19 6 7.8619 1.4316 -0.4890 20 6 7.9654 2.4849 -2.7312 21 1 7.2835 2.4676 -3.5686 22 6 9.3226 2.3687 -2.9450 23 7 9.8124 2.5151 -4.1566 24 14 10.4656 2.0032 -1.5134 25 1 10.5111 0.5377 -1.2780 26 1 11.8299 2.4961 -1.8309 27 1 9.9644 2.6851 -0.2931 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8899 31 1 1.8933 -0.5138 -0.8900 32 1 1.8933 -0.5138 0.8899 33 1 2.3608 3.6648 1.2944 34 1 3.8599 3.2033 2.1358 35 1 5.7627 4.7063 2.1984 36 1 6.5414 7.0398 2.0909 37 1 5.1327 8.7603 1.0332 38 1 2.9497 8.1454 0.0743 39 1 2.1750 5.8102 0.1736 40 1 5.7923 3.6647 0.4534 41 1 5.6006 3.5715 -1.9676 42 1 5.5079 1.8007 -1.8122 43 1 7.7486 3.9417 0.3552 44 1 9.0757 3.9387 -0.8311 45 1 7.5532 4.7834 -1.2009 46 1 7.4634 0.5192 -0.9326 47 1 8.9501 1.3769 -0.4605 48 1 7.4772 1.5407 0.5250 49 1 10.7671 2.4330 -4.3071 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000419358356.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:42:53 Heat of formation + Delta-G solvation = -50.471178 kcal Electronic energy + Delta-G solvation = -28002.305829 eV Core-core repulsion = 24315.886036 eV Total energy + Delta-G solvation = -3686.419793 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 319.193 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -40.48341 -39.39205 -37.45626 -36.25820 -35.05291 -32.32548 -31.79848 -31.19158 -30.95913 -28.69289 -26.13335 -25.15163 -25.05628 -24.10833 -22.88852 -22.51654 -21.27704 -20.31142 -18.75256 -17.60503 -16.97100 -16.39567 -16.25908 -15.94685 -15.56740 -15.35553 -15.12682 -14.60973 -14.40109 -13.85710 -13.58245 -13.42240 -13.27616 -12.95735 -12.89956 -12.80234 -12.63397 -12.42817 -12.16117 -12.04899 -11.81955 -11.76087 -11.66224 -11.62144 -11.18701 -11.03507 -10.82441 -10.50288 -10.33752 -10.08913 -9.99543 -9.94624 -9.79636 -8.98342 -8.92147 -8.79143 -8.49250 -8.31594 -8.00146 -6.03339 -3.98483 1.24239 1.33683 2.46590 2.68075 3.37583 3.47044 3.49632 3.70984 4.44717 4.49258 4.55833 4.79401 4.80691 4.85536 4.91311 4.95945 5.00099 5.05956 5.16641 5.22415 5.30263 5.37142 5.43428 5.58361 5.62370 5.63385 5.76988 5.79710 5.96261 5.98505 6.01430 6.14928 6.34866 6.39088 6.46048 6.50289 6.53927 6.54817 6.67929 6.72254 6.91382 6.93222 6.98396 7.10598 7.35152 7.42708 7.63775 7.76638 7.95060 8.05857 8.59766 9.01097 9.63006 11.10070 Molecular weight = 319.19amu Principal moments of inertia in cm(-1) A = 0.008929 B = 0.005038 C = 0.003522 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3135.058323 B = 5556.215637 C = 7947.631919 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C 0.061 3.939 3 O -0.367 6.367 4 C 0.459 3.541 5 O -0.473 6.473 6 C 0.105 3.895 7 H 0.080 0.920 8 C -0.079 4.079 9 C -0.087 4.087 10 C -0.115 4.115 11 C -0.113 4.113 12 C -0.122 4.122 13 C -0.119 4.119 14 C -0.114 4.114 15 N -0.671 5.671 16 C 0.085 3.915 17 C 0.043 3.957 18 C -0.142 4.142 19 C -0.132 4.132 20 C -0.510 4.510 21 H 0.070 0.930 22 C 0.073 3.927 23 N -0.898 5.898 24 Si 0.888 3.112 25 H -0.287 1.287 26 H -0.309 1.309 27 H -0.248 1.248 28 H 0.077 0.923 29 H 0.065 0.935 30 H 0.065 0.935 31 H 0.068 0.932 32 H 0.067 0.933 33 H 0.091 0.909 34 H 0.086 0.914 35 H 0.127 0.873 36 H 0.123 0.877 37 H 0.120 0.880 38 H 0.121 0.879 39 H 0.122 0.878 40 H 0.351 0.649 41 H 0.024 0.976 42 H 0.066 0.934 43 H 0.024 0.976 44 H 0.054 0.946 45 H 0.039 0.961 46 H 0.046 0.954 47 H 0.028 0.972 48 H 0.042 0.958 49 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -17.905 5.556 13.082 22.860 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.013 4.013 3 O -0.285 6.285 4 C 0.299 3.701 5 O -0.356 6.356 6 C -0.008 4.008 7 H 0.098 0.902 8 C -0.116 4.116 9 C -0.088 4.088 10 C -0.133 4.133 11 C -0.131 4.131 12 C -0.140 4.140 13 C -0.137 4.137 14 C -0.132 4.132 15 N -0.308 5.308 16 C -0.043 4.043 17 C 0.041 3.959 18 C -0.199 4.199 19 C -0.189 4.189 20 C -0.548 4.548 21 H 0.088 0.912 22 C -0.128 4.128 23 N -0.535 5.535 24 Si 0.721 3.279 25 H -0.215 1.215 26 H -0.238 1.238 27 H -0.174 1.174 28 H 0.095 0.905 29 H 0.084 0.916 30 H 0.084 0.916 31 H 0.087 0.913 32 H 0.086 0.914 33 H 0.109 0.891 34 H 0.105 0.895 35 H 0.145 0.855 36 H 0.141 0.859 37 H 0.138 0.862 38 H 0.139 0.861 39 H 0.140 0.860 40 H 0.176 0.824 41 H 0.042 0.958 42 H 0.085 0.915 43 H 0.043 0.957 44 H 0.073 0.927 45 H 0.058 0.942 46 H 0.066 0.934 47 H 0.046 0.954 48 H 0.061 0.939 49 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -17.518 4.557 13.087 22.337 hybrid contribution 0.699 0.370 0.129 0.801 sum -16.820 4.927 13.216 21.951 Atomic orbital electron populations 1.21788 0.92906 1.02748 1.03332 1.22947 0.95021 0.80723 1.02577 1.86476 1.25190 1.31987 1.84801 1.23810 0.80077 0.92934 0.73292 1.90690 1.60034 1.42384 1.42525 1.20946 0.91696 0.88582 0.99527 0.90219 1.20718 1.02064 0.91332 0.97505 1.19772 0.95081 0.94896 0.99014 1.21176 0.95643 0.96680 0.99794 1.21180 0.99644 0.93115 0.99169 1.21173 0.94760 0.99495 0.98533 1.21126 0.96547 0.96282 0.99744 1.21051 0.99837 0.92920 0.99360 1.60230 1.01057 1.47773 1.21768 1.22065 0.97245 0.99531 0.85442 1.18440 0.90057 0.91602 0.95756 1.22290 1.01613 0.99064 0.96974 1.22125 0.98002 0.99711 0.99013 1.20836 0.92556 1.50737 0.90651 0.91153 1.24961 0.98028 0.94381 0.95439 1.69966 1.13170 1.49057 1.21329 0.87254 0.78257 0.78512 0.83857 1.21508 1.23841 1.17420 0.90469 0.91630 0.91556 0.91333 0.91426 0.89094 0.89525 0.85514 0.85879 0.86190 0.86143 0.85969 0.82446 0.95767 0.91537 0.95661 0.92697 0.94194 0.93447 0.95364 0.93857 0.92801 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.14 10.29 37.15 0.38 -0.75 16 2 C 0.06 0.67 6.19 37.15 0.23 0.90 16 3 O -0.37 -4.78 10.03 -39.27 -0.39 -5.17 16 4 C 0.46 7.17 7.14 36.01 0.26 7.42 16 5 O -0.47 -9.09 15.67 -18.75 -0.29 -9.38 16 6 C 0.10 1.50 2.55 -68.86 -0.18 1.32 16 7 H 0.08 1.12 7.80 -51.93 -0.40 0.72 16 8 C -0.08 -0.88 4.94 -27.88 -0.14 -1.02 16 9 C -0.09 -1.00 4.83 -104.62 -0.51 -1.50 16 10 C -0.11 -1.35 8.04 -39.58 -0.32 -1.66 16 11 C -0.11 -1.25 10.05 -39.58 -0.40 -1.65 16 12 C -0.12 -1.26 10.05 -39.58 -0.40 -1.66 16 13 C -0.12 -1.20 10.05 -39.59 -0.40 -1.60 16 14 C -0.11 -1.20 9.70 -39.59 -0.38 -1.58 16 15 N -0.67 -11.58 5.06 -107.95 -0.55 -12.12 16 16 C 0.09 1.77 4.26 -3.83 -0.02 1.75 16 17 C 0.04 1.01 0.57 -155.66 -0.09 0.92 16 18 C -0.14 -3.09 7.24 37.16 0.27 -2.82 16 19 C -0.13 -3.09 7.54 37.16 0.28 -2.81 16 20 C -0.51 -14.44 8.62 -34.44 -0.30 -14.73 16 21 H 0.07 2.16 7.99 -52.49 -0.42 1.74 16 22 C 0.07 2.15 5.32 -17.82 -0.09 2.05 16 23 N -0.90 -27.85 13.96 55.43 0.77 -27.08 16 24 Si 0.89 22.65 22.79 -169.99 -3.87 18.78 16 25 H -0.29 -7.39 7.10 56.52 0.40 -6.99 16 26 H -0.31 -7.96 7.11 56.52 0.40 -7.56 16 27 H -0.25 -5.85 4.65 56.52 0.26 -5.59 16 28 H 0.08 0.45 8.14 -51.93 -0.42 0.03 16 29 H 0.06 0.46 8.14 -51.93 -0.42 0.04 16 30 H 0.07 0.49 8.14 -51.93 -0.42 0.07 16 31 H 0.07 0.79 8.13 -51.93 -0.42 0.37 16 32 H 0.07 0.73 8.13 -51.93 -0.42 0.31 16 33 H 0.09 0.86 7.94 -51.93 -0.41 0.45 16 34 H 0.09 0.97 8.08 -51.93 -0.42 0.55 16 35 H 0.13 1.44 7.55 -52.49 -0.40 1.04 16 36 H 0.12 1.17 8.06 -52.49 -0.42 0.75 16 37 H 0.12 1.00 8.06 -52.48 -0.42 0.58 16 38 H 0.12 0.96 8.06 -52.49 -0.42 0.54 16 39 H 0.12 1.07 8.06 -52.48 -0.42 0.65 16 40 H 0.35 5.67 3.79 -39.29 -0.15 5.52 16 41 H 0.02 0.50 8.05 -51.93 -0.42 0.08 16 42 H 0.07 1.49 7.62 -51.92 -0.40 1.10 16 43 H 0.02 0.47 7.06 -51.93 -0.37 0.11 16 44 H 0.05 1.27 4.30 -51.93 -0.22 1.05 16 45 H 0.04 0.84 8.12 -51.93 -0.42 0.42 16 46 H 0.05 1.14 8.14 -51.93 -0.42 0.72 16 47 H 0.03 0.68 2.26 -51.93 -0.12 0.56 16 48 H 0.04 0.93 7.60 -51.93 -0.39 0.53 16 49 H 0.26 7.69 8.31 -40.82 -0.34 7.35 16 LS Contribution 381.27 15.07 5.75 5.75 Total: -1.00 -33.11 381.27 -8.42 -41.53 By element: Atomic # 1 Polarization: 13.16 SS G_CDS: -8.04 Total: 5.12 kcal Atomic # 6 Polarization: -15.62 SS G_CDS: -1.79 Total: -17.41 kcal Atomic # 7 Polarization: -39.42 SS G_CDS: 0.23 Total: -39.20 kcal Atomic # 8 Polarization: -13.87 SS G_CDS: -0.69 Total: -14.56 kcal Atomic # 14 Polarization: 22.65 SS G_CDS: -3.87 Total: 18.78 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -33.11 -8.42 -41.53 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000419358356.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.942 kcal (2) G-P(sol) polarization free energy of solvation -33.108 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.050 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.421 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.529 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.471 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds