Wall clock time and date at job start Tue Mar 31 2020 12:20:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13609 * 1 3 3 C 1.43197 * 179.97438 * 2 1 4 4 C 1.39826 * 120.21686 * 95.36078 * 3 2 1 5 5 Br 1.89103 * 120.05272 * 0.02562 * 4 3 2 6 6 C 1.37921 * 119.89578 * 180.02562 * 4 3 2 7 7 C 1.38526 * 120.33278 * 0.02562 * 6 4 3 8 8 C 1.38041 * 120.43676 * 0.27193 * 7 6 4 9 9 C 1.38861 * 120.09711 * 359.45227 * 8 7 6 10 10 N 1.39034 * 120.16869 * 180.27326 * 9 8 7 11 11 C 1.46504 * 119.99861 * 3.89645 * 10 9 8 12 12 C 1.52995 * 109.46997 * 174.82183 * 11 10 9 13 13 C 1.50696 * 115.55375 * 279.90541 * 12 11 10 14 14 H 1.08002 * 120.00168 * 144.24638 * 13 12 11 15 15 C 1.37878 * 120.00004 * 324.26016 * 13 12 11 16 16 N 1.31517 * 119.99982 * 338.03754 * 15 13 12 17 17 Si 1.86805 * 120.00000 * 158.03718 * 15 13 12 18 18 H 1.48498 * 109.47040 * 359.97438 * 17 15 13 19 19 H 1.48495 * 109.46897 * 119.99886 * 17 15 13 20 20 H 1.48496 * 109.46928 * 239.99804 * 17 15 13 21 21 C 1.53004 * 117.49548 * 134.20022 * 12 11 10 22 22 C 1.53003 * 60.00064 * 252.50967 * 21 12 11 23 23 H 1.08001 * 119.83184 * 180.02562 * 6 4 3 24 24 H 1.08002 * 119.77519 * 179.97438 * 7 6 4 25 25 H 1.08002 * 119.95148 * 179.69937 * 8 7 6 26 26 H 0.96996 * 120.00101 * 183.89230 * 10 9 8 27 27 H 1.09000 * 109.46678 * 294.82681 * 11 10 9 28 28 H 1.08998 * 109.46869 * 54.82255 * 11 10 9 29 29 H 0.96991 * 119.99876 * 184.68787 * 16 15 13 30 30 H 1.08998 * 117.49702 * 359.97438 * 21 12 11 31 31 H 1.09003 * 117.49492 * 145.02306 * 21 12 11 32 32 H 1.08992 * 117.50082 * 252.51019 * 22 21 12 33 33 H 1.08998 * 117.51932 * 107.47960 * 22 21 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2717 0.1138 -1.2030 5 35 2.3338 0.2676 -2.8378 6 6 4.6509 0.1132 -1.1953 7 6 5.3438 0.0004 -0.0012 8 6 4.6631 -0.1183 1.1938 9 6 3.2745 -0.1139 1.2076 10 7 2.5874 -0.2276 2.4109 11 6 3.3261 -0.2665 3.6755 12 6 2.3381 -0.2640 4.8436 13 6 1.7706 1.0826 5.2121 14 1 0.7476 1.1637 5.5486 15 6 2.5574 2.2110 5.1194 16 7 3.8680 2.1023 5.1383 17 14 1.7619 3.8943 4.9669 18 1 0.2844 3.7456 4.9686 19 1 2.1758 4.7430 6.1130 20 1 2.1933 4.5324 3.6973 21 6 2.5816 -1.2626 5.9769 22 6 1.4252 -1.4819 4.9994 23 1 5.1934 0.2011 -2.1251 24 1 6.4238 0.0004 -0.0057 25 1 5.2112 -0.2107 2.1198 26 1 1.6189 -0.2811 2.4132 27 1 3.9325 -1.1715 3.7143 28 1 3.9734 0.6077 3.7451 29 1 4.4207 2.8993 5.1417 30 1 3.4455 -1.9216 5.8901 31 1 2.3314 -0.9456 6.9894 32 1 0.4144 -1.3093 5.3687 33 1 1.5283 -2.2848 4.2694 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000357663141.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:20:35 Heat of formation + Delta-G solvation = 81.745774 kcal Electronic energy + Delta-G solvation = -18364.248892 eV Core-core repulsion = 15436.918740 eV Total energy + Delta-G solvation = -2927.330152 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 320.022 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -39.62019 -37.23189 -36.07526 -34.56896 -32.39106 -32.08197 -30.23971 -28.69315 -26.07987 -25.21662 -23.61889 -21.55372 -21.03591 -19.45847 -18.62816 -17.07376 -16.31511 -15.65477 -14.89917 -14.69050 -14.33463 -14.07613 -13.87046 -13.56865 -13.08125 -12.91906 -12.55808 -12.49966 -12.12156 -11.85738 -11.58757 -11.18363 -11.12510 -10.99682 -10.77197 -10.60445 -10.41376 -10.29475 -9.79795 -9.57981 -9.29596 -8.94669 -8.70625 -8.26397 -7.14040 -6.30236 -4.25553 0.87480 1.56023 1.57956 2.95328 3.15890 3.20288 3.27592 3.32549 3.80479 4.02767 4.18396 4.23075 4.77093 4.97035 5.27389 5.34223 5.44438 5.55397 5.60369 5.81045 6.11376 6.15116 6.24012 6.27454 6.43977 6.50149 6.51678 6.59797 6.80299 6.87721 7.16614 7.30973 7.65464 7.75340 7.81895 8.06042 8.20120 8.68020 9.31594 10.72530 Molecular weight = 320.02amu Principal moments of inertia in cm(-1) A = 0.017000 B = 0.004350 C = 0.004215 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1646.644010 B = 6435.369888 C = 6641.702628 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.421 5.421 2 C 0.259 3.741 3 C -0.115 4.115 4 C 0.004 3.996 5 Br -0.052 7.052 6 C -0.171 4.171 7 C -0.036 4.036 8 C -0.184 4.184 9 C 0.287 3.713 10 N -0.700 5.700 11 C 0.137 3.863 12 C 0.037 3.963 13 C -0.497 4.497 14 H 0.064 0.936 15 C 0.079 3.921 16 N -0.868 5.868 17 Si 0.883 3.117 18 H -0.271 1.271 19 H -0.282 1.282 20 H -0.279 1.279 21 C -0.189 4.189 22 C -0.211 4.211 23 H 0.132 0.868 24 H 0.134 0.866 25 H 0.141 0.859 26 H 0.401 0.599 27 H 0.036 0.964 28 H 0.123 0.877 29 H 0.266 0.734 30 H 0.067 0.933 31 H 0.081 0.919 32 H 0.077 0.923 33 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.238 -4.464 -13.202 14.888 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.097 5.097 2 C -0.055 4.055 3 C -0.126 4.126 4 C -0.079 4.079 5 Br 0.034 6.966 6 C -0.193 4.193 7 C -0.057 4.057 8 C -0.207 4.207 9 C 0.170 3.830 10 N -0.318 5.318 11 C 0.015 3.985 12 C 0.036 3.964 13 C -0.534 4.534 14 H 0.082 0.918 15 C -0.126 4.126 16 N -0.504 5.504 17 Si 0.711 3.289 18 H -0.195 1.195 19 H -0.209 1.209 20 H -0.204 1.204 21 C -0.227 4.227 22 C -0.249 4.249 23 H 0.150 0.850 24 H 0.152 0.848 25 H 0.158 0.842 26 H 0.236 0.764 27 H 0.054 0.946 28 H 0.140 0.860 29 H 0.076 0.924 30 H 0.085 0.915 31 H 0.100 0.900 32 H 0.096 0.904 33 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges 3.378 -4.297 -13.607 14.664 hybrid contribution -0.136 0.833 0.442 0.953 sum 3.242 -3.464 -13.166 13.994 Atomic orbital electron populations 1.81179 1.11704 1.10202 1.06642 1.25317 0.92394 0.93590 0.94227 1.15192 0.84384 1.20697 0.92371 1.21416 0.94468 1.02655 0.89364 1.96707 1.76191 1.96840 1.26862 1.20633 0.90985 1.08498 0.99212 1.21041 0.99942 0.93627 0.91081 1.20847 0.91512 1.08686 0.99681 1.17773 0.91660 0.88767 0.84814 1.45257 1.09475 1.73595 1.03490 1.21551 0.94804 1.02277 0.79836 1.19096 0.94862 0.89750 0.92659 1.20488 0.98208 0.89085 1.45603 0.91814 1.24902 0.94592 0.99240 0.93830 1.69838 1.03750 1.29611 1.47245 0.86662 0.80281 0.83895 0.78111 1.19533 1.20855 1.20445 1.22954 0.98001 1.05311 0.96463 1.22903 0.95589 1.02403 1.03996 0.84974 0.84830 0.84155 0.76416 0.94624 0.86009 0.92419 0.91454 0.89996 0.90417 0.91285 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.42 -8.05 18.54 41.84 0.78 -7.27 16 2 C 0.26 4.61 12.97 -22.47 -0.29 4.32 16 3 C -0.11 -1.85 5.76 -106.57 -0.61 -2.46 16 4 C 0.00 0.05 6.25 -39.10 -0.24 -0.19 16 5 Br -0.05 -0.68 32.64 -68.01 -2.22 -2.90 16 6 C -0.17 -1.99 9.76 -39.59 -0.39 -2.38 16 7 C -0.04 -0.41 10.03 -39.55 -0.40 -0.81 16 8 C -0.18 -2.61 9.28 -39.42 -0.37 -2.98 16 9 C 0.29 4.75 6.65 -83.56 -0.56 4.19 16 10 N -0.70 -13.07 5.60 -58.42 -0.33 -13.39 16 11 C 0.14 2.78 4.58 -4.04 -0.02 2.76 16 12 C 0.04 0.83 1.74 -155.66 -0.27 0.56 16 13 C -0.50 -12.58 8.98 -34.44 -0.31 -12.89 16 14 H 0.06 1.66 7.91 -52.49 -0.42 1.25 16 15 C 0.08 1.98 5.03 -17.82 -0.09 1.90 16 16 N -0.87 -21.97 11.14 55.43 0.62 -21.35 16 17 Si 0.88 20.18 29.60 -169.99 -5.03 15.15 16 18 H -0.27 -6.28 7.11 56.52 0.40 -5.88 16 19 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 20 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 21 C -0.19 -3.92 9.88 -26.73 -0.26 -4.18 16 22 C -0.21 -4.24 9.84 -26.73 -0.26 -4.51 16 23 H 0.13 1.22 8.06 -52.49 -0.42 0.80 16 24 H 0.13 1.10 8.06 -52.49 -0.42 0.68 16 25 H 0.14 1.97 6.74 -52.49 -0.35 1.62 16 26 H 0.40 7.84 7.28 -40.82 -0.30 7.54 16 27 H 0.04 0.66 7.84 -51.93 -0.41 0.26 16 28 H 0.12 2.73 5.12 -51.93 -0.27 2.47 16 29 H 0.27 6.44 8.32 -40.82 -0.34 6.10 16 30 H 0.07 1.28 8.08 -51.93 -0.42 0.86 16 31 H 0.08 1.75 8.14 -51.93 -0.42 1.32 16 32 H 0.08 1.57 8.14 -51.93 -0.42 1.15 16 33 H 0.07 1.28 8.14 -51.93 -0.42 0.86 16 LS Contribution 311.40 15.07 4.69 4.69 Total: -1.00 -25.79 311.40 -8.97 -34.75 By element: Atomic # 1 Polarization: 10.41 SS G_CDS: -3.41 Total: 7.00 kcal Atomic # 6 Polarization: -12.61 SS G_CDS: -4.07 Total: -16.68 kcal Atomic # 7 Polarization: -43.09 SS G_CDS: 1.07 Total: -42.02 kcal Atomic # 14 Polarization: 20.18 SS G_CDS: -5.03 Total: 15.15 kcal Atomic # 35 Polarization: -0.68 SS G_CDS: -2.22 Total: -2.90 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -25.79 -8.97 -34.75 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000357663141.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 116.501 kcal (2) G-P(sol) polarization free energy of solvation -25.786 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 90.715 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.969 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.755 kcal (6) G-S(sol) free energy of system = (1) + (5) 81.746 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds