Wall clock time and date at job start Tue Mar 31 2020 13:18:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31415 * 1 3 3 Si 1.86794 * 120.00149 * 2 1 4 4 H 1.48500 * 109.47232 * 179.97438 * 3 2 1 5 5 H 1.48504 * 109.47063 * 299.99414 * 3 2 1 6 6 H 1.48497 * 109.47283 * 59.99855 * 3 2 1 7 7 C 1.38955 * 119.99720 * 179.97438 * 2 1 3 8 8 H 1.08006 * 119.99608 * 180.02562 * 7 2 1 9 9 N 1.37095 * 120.00322 * 359.97438 * 7 2 1 10 10 C 1.34766 * 120.00270 * 180.02562 * 9 7 2 11 11 O 1.21292 * 120.00193 * 359.97438 * 10 9 7 12 12 C 1.50704 * 120.00405 * 180.02562 * 10 9 7 13 13 N 1.46493 * 109.47458 * 179.97438 * 12 10 9 14 14 C 1.39962 * 120.00292 * 179.97438 * 13 12 10 15 15 C 1.38721 * 120.08033 * 0.02562 * 14 13 12 16 16 C 1.38319 * 119.96794 * 179.97438 * 15 14 13 17 17 Cl 1.73604 * 119.93139 * 179.97438 * 16 15 14 18 18 C 1.38358 * 120.13453 * 0.02562 * 16 15 14 19 19 C 1.38282 * 120.16657 * 0.27436 * 18 16 15 20 20 C 1.38493 * 120.02949 * 359.45193 * 19 18 16 21 21 O 1.36035 * 120.06790 * 180.27967 * 20 19 18 22 22 C 1.42893 * 116.99738 * 0.26319 * 21 20 19 23 23 F 1.39895 * 109.47818 * 300.00444 * 22 21 20 24 24 F 1.39904 * 109.47026 * 60.00724 * 22 21 20 25 25 H 0.96994 * 119.99535 * 0.02562 * 1 2 3 26 26 H 0.97007 * 119.99696 * 0.02562 * 9 7 2 27 27 H 1.09004 * 109.46746 * 59.99566 * 12 10 9 28 28 H 1.08994 * 109.46812 * 300.00423 * 12 10 9 29 29 H 0.97002 * 120.00260 * 0.02562 * 13 12 10 30 30 H 1.08000 * 120.01604 * 0.02562 * 15 14 13 31 31 H 1.08002 * 119.91381 * 179.97438 * 18 16 15 32 32 H 1.07994 * 119.98623 * 179.69886 * 19 18 16 33 33 H 1.09009 * 109.46787 * 180.02562 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3142 0.0000 0.0000 3 14 2.2482 1.6177 0.0000 4 1 3.7082 1.3463 0.0006 5 1 1.8895 2.3963 -1.2126 6 1 1.8894 2.3964 1.2124 7 6 2.0089 -1.2034 0.0005 8 1 3.0889 -1.2034 0.0010 9 7 1.3234 -2.3907 0.0016 10 6 1.9972 -3.5578 0.0026 11 8 3.2101 -3.5579 0.0022 12 6 1.2437 -4.8630 0.0032 13 7 2.1956 -5.9765 0.0037 14 6 1.7291 -7.2961 0.0049 15 6 0.3656 -7.5515 0.0050 16 6 -0.0928 -8.8565 0.0056 17 17 -1.7994 -9.1751 0.0064 18 6 0.8059 -9.9084 0.0066 19 6 2.1662 -9.6602 0.0127 20 6 2.6328 -8.3563 0.0064 21 8 3.9709 -8.1112 0.0067 22 6 4.8384 -9.2468 0.0079 23 9 4.5970 -10.0170 1.1505 24 9 4.5978 -10.0184 -1.1341 25 1 -0.4849 0.8400 -0.0004 26 1 0.3533 -2.3907 0.0016 27 1 0.6173 -4.9213 -0.8870 28 1 0.6167 -4.9201 0.8929 29 1 3.1493 -5.7993 0.0040 30 1 -0.3376 -6.7318 0.0038 31 1 0.4440 -10.9260 0.0074 32 1 2.8651 -10.4835 0.0184 33 1 5.8756 -8.9116 0.0084 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000424574476.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:18:11 Heat of formation + Delta-G solvation = -160.668413 kcal Electronic energy + Delta-G solvation = -23836.833073 eV Core-core repulsion = 19559.189210 eV Total energy + Delta-G solvation = -4277.643864 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 320.053 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -49.53329 -47.51933 -40.28911 -38.50895 -37.72539 -36.44020 -35.08614 -34.00113 -31.44109 -30.29887 -29.89332 -26.86202 -26.21607 -24.55403 -22.57249 -22.01469 -19.63448 -19.09505 -18.51503 -18.09266 -18.08809 -17.27847 -16.31817 -15.93937 -15.52763 -15.12949 -14.78610 -14.59230 -14.53082 -14.27817 -14.12807 -13.88776 -13.85680 -13.58848 -13.25382 -13.05771 -12.91158 -12.47520 -12.23297 -11.98826 -11.65833 -11.43324 -11.27367 -11.13234 -10.94105 -10.43645 -10.35185 -10.06828 -9.67804 -8.67534 -8.66209 -8.14295 -7.28212 -6.55540 -3.97365 1.06471 1.36843 2.07454 2.42346 3.07636 3.20174 3.25891 3.27268 3.46613 3.54405 3.69365 4.08890 4.12542 4.45800 4.64886 4.78750 4.85881 5.12042 5.12337 5.27233 5.51021 5.59467 5.66281 5.80680 6.03012 6.04049 6.18796 6.35193 6.69515 7.30978 7.42863 7.86754 7.96179 8.41173 9.01296 9.34687 9.82786 10.61452 Molecular weight = 320.05amu Principal moments of inertia in cm(-1) A = 0.013944 B = 0.003176 C = 0.002631 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2007.492969 B = 8812.886106 C =10640.584189 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.895 5.895 2 C 0.026 3.974 3 Si 0.932 3.068 4 H -0.267 1.267 5 H -0.280 1.280 6 H -0.280 1.280 7 C -0.305 4.305 8 H 0.106 0.894 9 N -0.550 5.550 10 C 0.429 3.571 11 O -0.593 6.593 12 C 0.109 3.891 13 N -0.712 5.712 14 C 0.238 3.762 15 C -0.174 4.174 16 C -0.001 4.001 17 Cl -0.073 7.073 18 C -0.146 4.146 19 C -0.129 4.129 20 C 0.027 3.973 21 O -0.316 6.316 22 C 0.413 3.587 23 F -0.201 7.201 24 F -0.201 7.201 25 H 0.274 0.726 26 H 0.395 0.605 27 H 0.079 0.921 28 H 0.079 0.921 29 H 0.419 0.581 30 H 0.144 0.856 31 H 0.133 0.867 32 H 0.138 0.862 33 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.838 -19.409 0.021 19.496 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.535 5.535 2 C -0.177 4.177 3 Si 0.759 3.241 4 H -0.191 1.191 5 H -0.206 1.206 6 H -0.206 1.206 7 C -0.434 4.434 8 H 0.124 0.876 9 N -0.185 5.185 10 C 0.214 3.786 11 O -0.479 6.479 12 C -0.019 4.019 13 N -0.343 5.343 14 C 0.130 3.870 15 C -0.198 4.198 16 C -0.028 4.028 17 Cl -0.044 7.044 18 C -0.167 4.167 19 C -0.148 4.148 20 C -0.020 4.020 21 O -0.234 6.234 22 C 0.323 3.677 23 F -0.183 7.183 24 F -0.183 7.183 25 H 0.084 0.916 26 H 0.229 0.771 27 H 0.097 0.903 28 H 0.097 0.903 29 H 0.259 0.741 30 H 0.161 0.839 31 H 0.150 0.850 32 H 0.156 0.844 33 H 0.197 0.803 Dipole moment (debyes) X Y Z Total from point charges 2.315 -18.908 0.021 19.049 hybrid contribution -0.134 0.559 0.002 0.575 sum 2.181 -18.348 0.023 18.477 Atomic orbital electron populations 1.69615 1.06011 1.28454 1.49437 1.25318 0.95669 0.99927 0.96750 0.85759 0.79711 0.80793 0.77856 1.19125 1.20580 1.20586 1.19781 0.93502 0.81971 1.48146 0.87642 1.41793 1.09409 1.04472 1.62779 1.19658 0.88330 0.84853 0.85717 1.90515 1.13720 1.86691 1.56973 1.21030 0.92129 0.86492 1.02229 1.44473 1.10304 1.00278 1.79266 1.16954 0.90566 0.83721 0.95768 1.20351 0.93029 0.96129 1.10314 1.20511 0.84564 0.93970 1.03771 1.98360 1.13222 1.95891 1.96919 1.20478 0.91334 0.98436 1.06467 1.21144 0.96671 0.94398 1.02616 1.18255 0.81325 0.93089 1.09373 1.86604 1.15052 1.32392 1.89331 1.23338 0.96111 0.76563 0.71699 1.93087 1.95742 1.77263 1.52169 1.93091 1.95759 1.77191 1.52216 0.91625 0.77108 0.90321 0.90319 0.74122 0.83856 0.84953 0.84412 0.80308 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.89 -23.44 13.05 55.50 0.72 -22.71 16 2 C 0.03 0.67 5.50 -17.46 -0.10 0.58 16 3 Si 0.93 20.30 29.55 -169.99 -5.02 15.28 16 4 H -0.27 -5.82 7.11 56.52 0.40 -5.42 16 5 H -0.28 -6.01 7.11 56.52 0.40 -5.61 16 6 H -0.28 -6.01 7.11 56.52 0.40 -5.61 16 7 C -0.30 -8.16 9.68 -14.93 -0.14 -8.31 16 8 H 0.11 2.97 7.16 -52.48 -0.38 2.60 16 9 N -0.55 -13.25 5.29 -10.96 -0.06 -13.31 16 10 C 0.43 9.61 7.85 -10.99 -0.09 9.52 16 11 O -0.59 -15.24 15.24 5.55 0.08 -15.16 16 12 C 0.11 1.85 5.40 -5.20 -0.03 1.82 16 13 N -0.71 -11.78 5.70 -59.67 -0.34 -12.12 16 14 C 0.24 3.51 6.67 -83.57 -0.56 2.96 16 15 C -0.17 -2.34 9.09 -39.37 -0.36 -2.70 16 16 C 0.00 -0.01 6.32 -39.51 -0.25 -0.26 16 17 Cl -0.07 -0.83 28.95 -51.86 -1.50 -2.33 16 18 C -0.15 -1.70 9.82 -39.52 -0.39 -2.09 16 19 C -0.13 -1.58 8.26 -39.47 -0.33 -1.90 16 20 C 0.03 0.37 6.50 -39.09 -0.25 0.11 16 21 O -0.32 -4.04 9.68 -19.85 -0.19 -4.24 16 22 C 0.41 3.73 5.97 101.05 0.60 4.34 16 23 F -0.20 -2.02 15.57 2.25 0.04 -1.99 16 24 F -0.20 -2.02 15.60 2.25 0.04 -1.99 16 25 H 0.27 6.77 8.31 -40.82 -0.34 6.43 16 26 H 0.40 9.04 7.90 -40.82 -0.32 8.71 16 27 H 0.08 1.19 7.95 -51.93 -0.41 0.78 16 28 H 0.08 1.19 7.95 -51.93 -0.41 0.78 16 29 H 0.42 7.55 6.80 -40.82 -0.28 7.28 16 30 H 0.14 1.80 6.74 -52.49 -0.35 1.44 16 31 H 0.13 1.27 8.06 -52.49 -0.42 0.84 16 32 H 0.14 1.51 5.09 -52.49 -0.27 1.24 16 33 H 0.18 0.81 8.14 -51.92 -0.42 0.38 16 LS Contribution 315.12 15.07 4.75 4.75 Total: -1.00 -30.12 315.12 -5.77 -35.90 By element: Atomic # 1 Polarization: 16.24 SS G_CDS: -2.40 Total: 13.84 kcal Atomic # 6 Polarization: 5.96 SS G_CDS: -1.88 Total: 4.07 kcal Atomic # 7 Polarization: -48.47 SS G_CDS: 0.33 Total: -48.14 kcal Atomic # 8 Polarization: -19.28 SS G_CDS: -0.11 Total: -19.39 kcal Atomic # 9 Polarization: -4.04 SS G_CDS: 0.07 Total: -3.97 kcal Atomic # 14 Polarization: 20.30 SS G_CDS: -5.02 Total: 15.28 kcal Atomic # 17 Polarization: -0.83 SS G_CDS: -1.50 Total: -2.33 kcal Total LS contribution 4.75 Total: 4.75 kcal Total: -30.12 -5.77 -35.90 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000424574476.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -124.773 kcal (2) G-P(sol) polarization free energy of solvation -30.122 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -154.894 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.774 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.896 kcal (6) G-S(sol) free energy of system = (1) + (5) -160.668 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds