Wall clock time and date at job start Tue Mar 31 2020 13:28:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34682 * 116.99652 * 2 1 4 4 O 1.21425 * 120.00187 * 359.97438 * 3 2 1 5 5 C 1.48060 * 119.99831 * 179.97438 * 3 2 1 6 6 N 1.32806 * 119.71929 * 359.97438 * 5 3 2 7 7 C 1.31570 * 121.62294 * 180.02562 * 6 5 3 8 8 Cl 1.73604 * 119.56685 * 179.97438 * 7 6 5 9 9 C 1.38793 * 120.87058 * 0.02562 * 7 6 5 10 10 C 1.38515 * 119.34633 * 359.72346 * 9 7 6 11 11 C 1.38665 * 118.50664 * 0.53474 * 10 9 7 12 12 C 1.50700 * 120.45455 * 179.73568 * 11 10 9 13 13 F 1.39902 * 109.47319 * 119.72849 * 12 11 10 14 14 F 1.39899 * 109.47451 * 359.72464 * 12 11 10 15 15 N 1.46505 * 109.47361 * 239.72601 * 12 11 10 16 16 C 1.46502 * 119.99793 * 359.72810 * 15 12 11 17 17 C 1.36934 * 119.99933 * 179.97438 * 15 12 11 18 18 H 1.07991 * 120.00424 * 342.13924 * 17 15 12 19 19 C 1.38814 * 119.99455 * 162.13838 * 17 15 12 20 20 N 1.31615 * 120.00309 * 344.58587 * 19 17 15 21 21 Si 1.86806 * 119.99722 * 164.59040 * 19 17 15 22 22 H 1.48498 * 109.47345 * 89.99558 * 21 19 17 23 23 H 1.48500 * 109.47006 * 209.99795 * 21 19 17 24 24 H 1.48501 * 109.46835 * 329.99489 * 21 19 17 25 25 H 1.09001 * 109.46736 * 60.00346 * 1 2 3 26 26 H 1.08996 * 109.46678 * 179.97438 * 1 2 3 27 27 H 1.08999 * 109.47185 * 300.00279 * 1 2 3 28 28 H 1.08005 * 120.32501 * 179.97438 * 9 7 6 29 29 H 1.08004 * 120.74834 * 180.27633 * 10 9 7 30 30 H 1.09001 * 109.47135 * 264.80659 * 16 15 12 31 31 H 1.09000 * 109.46967 * 24.79796 * 16 15 12 32 32 H 1.08995 * 109.47231 * 144.80430 * 16 15 12 33 33 H 0.97006 * 119.99991 * 180.02562 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0634 1.2001 0.0000 4 8 1.4021 2.2184 -0.0005 5 6 3.5420 1.2776 0.0006 6 7 4.2599 0.1603 0.0016 7 6 5.5753 0.1855 0.0026 8 17 6.4607 -1.3078 0.0046 9 6 6.2645 1.3902 0.0032 10 6 5.5536 2.5790 -0.0031 11 6 4.1681 2.5216 0.0015 12 6 3.3512 3.7879 0.0009 13 9 2.5450 3.8224 -1.1420 14 9 4.2067 4.8949 0.0017 15 7 2.5051 3.8239 1.1964 16 6 2.5482 2.7192 2.1577 17 6 1.6704 4.8876 1.4127 18 1 1.8301 5.8157 0.8841 19 6 0.6188 4.7730 2.3116 20 7 0.2326 3.5845 2.7245 21 14 -0.2484 6.3057 2.9349 22 1 -1.3815 6.6347 2.0333 23 1 -0.7622 6.0605 4.3064 24 1 0.7094 7.4403 2.9606 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3632 -1.0277 -0.0005 27 1 -0.3633 0.5139 0.8899 28 1 7.3445 1.4007 0.0045 29 1 6.0668 3.5293 -0.0073 30 1 1.7491 2.0122 1.9348 31 1 3.5111 2.2133 2.0869 32 1 2.4165 3.1102 3.1666 33 1 -0.5026 3.5044 3.3524 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001165092182.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:28:11 Heat of formation + Delta-G solvation = -70.856713 kcal Electronic energy + Delta-G solvation = -26532.328012 eV Core-core repulsion = 22258.578676 eV Total energy + Delta-G solvation = -4273.749336 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 320.053 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -47.92473 -46.00174 -40.90387 -39.28497 -36.89384 -36.21833 -34.92569 -33.09663 -32.10414 -30.48591 -27.61638 -26.28586 -25.78365 -24.63486 -23.12100 -21.33453 -20.52876 -18.29659 -17.50934 -17.40482 -16.76804 -16.38798 -16.05724 -15.82252 -15.67577 -15.34484 -14.51927 -14.23452 -13.88373 -13.48195 -13.25460 -13.16143 -12.94845 -12.73015 -12.35708 -12.28128 -11.87944 -11.67676 -11.60392 -11.52530 -11.43202 -10.95752 -10.76394 -10.60362 -10.26431 -10.20852 -10.08103 -9.93414 -9.89656 -9.68503 -9.02597 -8.67809 -7.23561 -5.84787 -3.31473 0.32327 0.84531 1.56298 2.71740 2.91537 3.35774 3.41178 3.44058 3.65895 3.82133 4.21630 4.39589 4.55450 4.72530 4.81428 4.90424 5.19512 5.34814 5.50887 5.59332 5.62212 5.70723 5.76583 6.00642 6.09169 6.24892 6.37970 6.85138 7.12077 7.31643 7.43751 7.71313 8.08819 8.31972 8.99873 9.56783 10.02034 11.20776 Molecular weight = 320.05amu Principal moments of inertia in cm(-1) A = 0.017546 B = 0.005542 C = 0.004793 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1595.383515 B = 5051.298743 C = 5840.264850 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.040 3.960 2 O -0.347 6.347 3 C 0.479 3.521 4 O -0.389 6.389 5 C 0.168 3.832 6 N -0.435 5.435 7 C 0.177 3.823 8 Cl -0.024 7.024 9 C -0.136 4.136 10 C -0.039 4.039 11 C -0.127 4.127 12 C 0.553 3.447 13 F -0.194 7.194 14 F -0.209 7.209 15 N -0.577 5.577 16 C 0.151 3.849 17 C -0.255 4.255 18 H 0.077 0.923 19 C 0.014 3.986 20 N -0.894 5.894 21 Si 0.913 3.087 22 H -0.285 1.285 23 H -0.289 1.289 24 H -0.277 1.277 25 H 0.058 0.942 26 H 0.094 0.906 27 H 0.073 0.927 28 H 0.157 0.843 29 H 0.165 0.835 30 H 0.048 0.952 31 H -0.004 1.004 32 H 0.061 0.939 33 H 0.253 0.747 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.212 -7.936 -4.891 13.827 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.054 4.054 2 O -0.264 6.264 3 C 0.316 3.684 4 O -0.267 6.267 5 C 0.030 3.970 6 N -0.148 5.148 7 C 0.010 3.990 8 Cl 0.004 6.996 9 C -0.157 4.157 10 C -0.065 4.065 11 C -0.132 4.132 12 C 0.427 3.573 13 F -0.175 7.175 14 F -0.191 7.191 15 N -0.305 5.305 16 C 0.007 3.993 17 C -0.383 4.383 18 H 0.095 0.905 19 C -0.185 4.185 20 N -0.537 5.537 21 Si 0.742 3.258 22 H -0.212 1.212 23 H -0.215 1.215 24 H -0.203 1.203 25 H 0.077 0.923 26 H 0.112 0.888 27 H 0.091 0.909 28 H 0.175 0.825 29 H 0.183 0.817 30 H 0.066 0.934 31 H 0.014 0.986 32 H 0.079 0.921 33 H 0.064 0.936 Dipole moment (debyes) X Y Z Total from point charges 9.401 -8.542 -4.780 13.572 hybrid contribution -0.238 1.364 0.249 1.407 sum 9.163 -7.177 -4.531 12.490 Atomic orbital electron populations 1.23239 0.76142 1.02769 1.03243 1.86542 1.23082 1.31874 1.84927 1.20316 0.87201 0.83023 0.77863 1.91365 1.64127 1.33696 1.37496 1.19841 0.91990 0.87269 0.97911 1.67077 1.06399 1.30552 1.10778 1.21711 0.89524 0.88095 0.99627 1.98409 1.71849 1.32881 1.96432 1.22038 1.02236 0.90442 1.00959 1.21547 0.91982 0.99774 0.93214 1.21345 0.95401 0.95490 1.00931 1.17628 0.80647 0.78811 0.80187 1.93070 1.74675 1.96459 1.53338 1.92991 1.71437 1.57976 1.96667 1.44954 1.45991 1.23076 1.16506 1.21375 0.94505 0.89975 0.93401 1.19137 1.07248 0.89192 1.22724 0.90522 1.24947 0.96149 0.96810 1.00604 1.70123 1.28202 1.20879 1.34534 0.86141 0.79469 0.82265 0.77936 1.21209 1.21452 1.20275 0.92324 0.88767 0.90854 0.82542 0.81746 0.93364 0.98587 0.92079 0.93641 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 42. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.64 10.56 101.05 1.07 1.71 16 2 O -0.35 -6.64 10.38 -40.44 -0.42 -7.06 16 3 C 0.48 10.20 5.66 34.76 0.20 10.40 16 4 O -0.39 -9.55 9.50 -19.21 -0.18 -9.73 16 5 C 0.17 3.25 5.25 -83.03 -0.44 2.81 16 6 N -0.43 -7.53 10.10 -6.95 -0.07 -7.60 16 7 C 0.18 2.49 7.27 -17.46 -0.13 2.36 16 8 Cl -0.02 -0.28 29.11 -51.86 -1.51 -1.79 16 9 C -0.14 -1.61 9.88 -39.27 -0.39 -2.00 16 10 C -0.04 -0.56 9.53 -39.32 -0.37 -0.93 16 11 C -0.13 -2.39 3.85 -104.08 -0.40 -2.79 16 12 C 0.55 12.51 1.93 -5.19 -0.01 12.50 16 13 F -0.19 -4.70 14.79 2.25 0.03 -4.67 16 14 F -0.21 -4.47 15.81 2.25 0.04 -4.44 16 15 N -0.58 -14.83 1.75 -180.80 -0.32 -15.15 16 16 C 0.15 3.72 6.76 59.85 0.40 4.12 16 17 C -0.25 -7.13 9.38 -15.06 -0.14 -7.27 16 18 H 0.08 2.16 7.87 -52.49 -0.41 1.75 16 19 C 0.01 0.40 5.07 -17.43 -0.09 0.31 16 20 N -0.89 -25.22 10.53 55.49 0.58 -24.64 16 21 Si 0.91 21.80 29.58 -169.99 -5.03 16.77 16 22 H -0.29 -6.86 7.11 56.52 0.40 -6.45 16 23 H -0.29 -6.85 7.11 56.52 0.40 -6.45 16 24 H -0.28 -6.52 7.11 56.52 0.40 -6.12 16 25 H 0.06 0.92 8.14 -51.93 -0.42 0.50 16 26 H 0.09 1.14 8.14 -51.93 -0.42 0.71 16 27 H 0.07 1.32 8.14 -51.93 -0.42 0.89 16 28 H 0.16 1.21 8.06 -52.48 -0.42 0.79 16 29 H 0.17 1.94 7.26 -52.48 -0.38 1.56 16 30 H 0.05 1.26 4.56 -51.93 -0.24 1.02 16 31 H 0.00 -0.09 5.57 -51.93 -0.29 -0.38 16 32 H 0.06 1.61 7.06 -51.93 -0.37 1.24 16 33 H 0.25 6.92 8.31 -40.82 -0.34 6.58 16 LS Contribution 301.14 15.07 4.54 4.54 Total: -1.00 -31.76 301.14 -5.15 -36.90 By element: Atomic # 1 Polarization: -1.84 SS G_CDS: -2.51 Total: -4.36 kcal Atomic # 6 Polarization: 21.52 SS G_CDS: -0.30 Total: 21.22 kcal Atomic # 7 Polarization: -47.59 SS G_CDS: 0.20 Total: -47.39 kcal Atomic # 8 Polarization: -16.20 SS G_CDS: -0.60 Total: -16.80 kcal Atomic # 9 Polarization: -9.18 SS G_CDS: 0.07 Total: -9.11 kcal Atomic # 14 Polarization: 21.80 SS G_CDS: -5.03 Total: 16.77 kcal Atomic # 17 Polarization: -0.28 SS G_CDS: -1.51 Total: -1.79 kcal Total LS contribution 4.54 Total: 4.54 kcal Total: -31.76 -5.15 -36.90 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001165092182.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.952 kcal (2) G-P(sol) polarization free energy of solvation -31.759 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.711 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.145 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.905 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.857 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds