Wall clock time and date at job start Tue Mar 31 2020 13:28:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.37167 * 119.99931 * 2 1 4 4 H 1.07995 * 120.00036 * 213.65803 * 3 2 1 5 5 C 1.38885 * 119.99745 * 33.65541 * 3 2 1 6 6 N 1.31465 * 120.00018 * 5.60403 * 5 3 2 7 7 Si 1.86802 * 119.99847 * 185.60579 * 5 3 2 8 8 H 1.48502 * 109.47353 * 59.99815 * 7 5 3 9 9 H 1.48494 * 109.47291 * 179.97438 * 7 5 3 10 10 H 1.48500 * 109.47010 * 300.00089 * 7 5 3 11 11 C 1.34771 * 120.00073 * 179.97438 * 2 1 3 12 12 O 1.21600 * 120.00330 * 179.97438 * 11 2 1 13 13 N 1.34779 * 120.00243 * 0.02562 * 11 2 1 14 14 C 1.40101 * 120.00027 * 183.96250 * 13 11 2 15 15 C 1.38865 * 120.00715 * 144.76052 * 14 13 11 16 16 C 1.38100 * 120.00206 * 180.23157 * 15 14 13 17 17 C 1.38702 * 120.02755 * 359.49142 * 16 15 14 18 18 O 1.36000 * 119.98675 * 180.25261 * 17 16 15 19 19 C 1.42896 * 117.00439 * 0.25757 * 18 17 16 20 20 F 1.39907 * 109.46971 * 300.00026 * 19 18 17 21 21 F 1.39903 * 109.47061 * 59.99386 * 19 18 17 22 22 C 1.38807 * 120.01930 * 0.50850 * 17 16 15 23 23 Cl 1.73601 * 119.99933 * 179.72167 * 22 17 16 24 24 C 1.38202 * 119.99576 * 359.74822 * 22 17 16 25 25 H 1.08997 * 109.47488 * 264.66558 * 1 2 3 26 26 H 1.08997 * 109.47405 * 24.67331 * 1 2 3 27 27 H 1.09003 * 109.47131 * 144.66437 * 1 2 3 28 28 H 0.97005 * 120.00122 * 180.02562 * 6 5 3 29 29 H 0.97002 * 120.00016 * 3.96011 * 13 11 2 30 30 H 1.07997 * 120.00093 * 359.95102 * 15 14 13 31 31 H 1.08000 * 119.98888 * 179.74219 * 16 15 14 32 32 H 1.08998 * 109.47339 * 180.02562 * 19 18 17 33 33 H 1.07997 * 120.00722 * 180.02562 * 24 22 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1508 1.1879 0.0000 4 1 3.0950 1.2663 -0.5184 5 6 1.6309 2.2898 0.6666 6 7 0.5392 2.1665 1.3886 7 14 2.4829 3.9472 0.5372 8 1 2.5225 4.3738 -0.8847 9 1 1.7346 4.9521 1.3343 10 1 3.8687 3.8334 1.0586 11 6 2.1389 -1.1671 0.0005 12 8 3.3549 -1.1672 0.0001 13 7 1.4650 -2.3344 0.0005 14 6 2.1630 -3.5462 0.0849 15 6 1.6177 -4.6145 0.7847 16 6 2.3081 -5.8074 0.8719 17 6 3.5413 -5.9426 0.2517 18 8 4.2181 -7.1194 0.3338 19 6 3.5969 -8.1751 1.0697 20 9 3.3940 -7.7652 2.3919 21 9 2.3655 -8.4895 0.4848 22 6 4.0874 -4.8754 -0.4481 23 17 5.6343 -5.0429 -1.2180 24 6 3.3998 -3.6795 -0.5314 25 1 -0.3634 -0.0955 1.0232 26 1 -0.3634 0.9338 -0.4290 27 1 -0.3633 -0.8384 -0.5944 28 1 0.1759 2.9362 1.8539 29 1 0.4968 -2.3355 -0.0579 30 1 0.6558 -4.5110 1.2647 31 1 1.8856 -6.6367 1.4198 32 1 4.2408 -9.0545 1.0571 33 1 3.8243 -2.8492 -1.0762 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001192307459.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:28:24 Heat of formation + Delta-G solvation = -131.624671 kcal Electronic energy + Delta-G solvation = -24333.795229 eV Core-core repulsion = 20057.410797 eV Total energy + Delta-G solvation = -4276.384432 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 320.053 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -49.53660 -47.52441 -40.29591 -39.20747 -37.39157 -36.31541 -34.86387 -33.70605 -31.60321 -30.73356 -28.90064 -26.42031 -26.09114 -24.45968 -23.08002 -22.19995 -19.96671 -19.14680 -18.30142 -18.09402 -17.95732 -16.84564 -16.48269 -16.15733 -15.34642 -14.88061 -14.71585 -14.52604 -14.37973 -14.14541 -13.90917 -13.85655 -13.59160 -13.35149 -12.92605 -12.82002 -12.52972 -12.17177 -12.13031 -11.46674 -11.45131 -11.34166 -11.20060 -10.94204 -10.76174 -10.47597 -10.38651 -9.59085 -9.02131 -8.98655 -8.63459 -7.76431 -7.50035 -6.33975 -3.98999 1.21960 1.36339 2.24172 2.43032 3.19997 3.24486 3.25540 3.26997 3.53702 3.63768 4.08922 4.21944 4.27652 4.44089 4.78804 4.87350 5.10244 5.19338 5.30130 5.50925 5.73392 5.84588 6.10130 6.13803 6.36759 6.58739 6.69303 6.77882 7.04044 7.30952 7.45670 7.54999 8.29166 8.59447 9.13245 9.37046 9.94787 10.73375 Molecular weight = 320.05amu Principal moments of inertia in cm(-1) A = 0.023017 B = 0.003204 C = 0.002954 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1216.186945 B = 8736.496104 C = 9475.825536 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.113 3.887 2 N -0.460 5.460 3 C -0.296 4.296 4 H 0.094 0.906 5 C 0.033 3.967 6 N -0.887 5.887 7 Si 0.929 3.071 8 H -0.274 1.274 9 H -0.284 1.284 10 H -0.272 1.272 11 C 0.653 3.347 12 O -0.600 6.600 13 N -0.694 5.694 14 C 0.186 3.814 15 C -0.121 4.121 16 C -0.156 4.156 17 C 0.074 3.926 18 O -0.312 6.312 19 C 0.411 3.589 20 F -0.199 7.199 21 F -0.200 7.200 22 C -0.027 4.027 23 Cl -0.058 7.058 24 C -0.086 4.086 25 H 0.053 0.947 26 H 0.075 0.925 27 H 0.019 0.981 28 H 0.268 0.732 29 H 0.403 0.597 30 H 0.135 0.865 31 H 0.140 0.860 32 H 0.179 0.821 33 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.402 -18.806 -1.650 18.883 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.031 4.031 2 N -0.182 5.182 3 C -0.425 4.425 4 H 0.112 0.888 5 C -0.170 4.170 6 N -0.526 5.526 7 Si 0.756 3.244 8 H -0.199 1.199 9 H -0.210 1.210 10 H -0.197 1.197 11 C 0.356 3.644 12 O -0.481 6.481 13 N -0.343 5.343 14 C 0.087 3.913 15 C -0.143 4.143 16 C -0.176 4.176 17 C 0.030 3.970 18 O -0.230 6.230 19 C 0.321 3.679 20 F -0.181 7.181 21 F -0.182 7.182 22 C -0.055 4.055 23 Cl -0.030 7.030 24 C -0.108 4.108 25 H 0.072 0.928 26 H 0.094 0.906 27 H 0.038 0.962 28 H 0.078 0.922 29 H 0.239 0.761 30 H 0.153 0.847 31 H 0.157 0.843 32 H 0.196 0.804 33 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges 1.365 -18.534 -1.658 18.658 hybrid contribution -0.484 0.803 0.297 0.984 sum 0.881 -17.730 -1.361 17.804 Atomic orbital electron populations 1.21435 0.81523 0.99881 1.00294 1.42702 1.04902 1.02930 1.67680 1.19393 1.06524 0.85075 1.31482 0.88831 1.25445 0.96681 1.00373 0.94531 1.69928 1.21212 1.31333 1.30129 0.85954 0.79383 0.80738 0.78330 1.19893 1.20986 1.19726 1.16266 0.85698 0.80066 0.82329 1.90752 1.11601 1.85443 1.60344 1.43018 1.09780 1.03285 1.78210 1.17391 0.92846 0.85798 0.95273 1.20770 1.01644 0.92447 0.99443 1.21122 0.93935 0.99737 1.02778 1.18323 0.92715 0.84993 1.01016 1.86663 1.45990 1.20257 1.70107 1.23334 0.81249 0.90411 0.72933 1.93105 1.95439 1.91764 1.37796 1.93093 1.48016 1.92979 1.84135 1.19934 0.90102 0.93394 1.02063 1.98350 1.26986 1.97866 1.79752 1.21232 0.94611 0.95588 0.99324 0.92834 0.90590 0.96239 0.92230 0.76066 0.84707 0.84277 0.80418 0.81845 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 2.37 8.38 59.85 0.50 2.87 16 2 N -0.46 -11.45 2.98 -127.62 -0.38 -11.83 16 3 C -0.30 -8.10 9.04 -14.92 -0.13 -8.23 16 4 H 0.09 2.65 7.61 -52.49 -0.40 2.25 16 5 C 0.03 0.86 5.17 -17.47 -0.09 0.77 16 6 N -0.89 -23.42 11.09 55.49 0.62 -22.81 16 7 Si 0.93 20.64 29.56 -169.99 -5.02 15.62 16 8 H -0.27 -5.93 7.11 56.52 0.40 -5.53 16 9 H -0.28 -6.19 7.11 56.52 0.40 -5.79 16 10 H -0.27 -6.14 7.11 56.52 0.40 -5.74 16 11 C 0.65 15.63 8.07 -86.92 -0.70 14.93 16 12 O -0.60 -16.21 13.63 5.28 0.07 -16.14 16 13 N -0.69 -12.98 5.22 -14.20 -0.07 -13.05 16 14 C 0.19 3.24 6.30 -83.63 -0.53 2.71 16 15 C -0.12 -1.75 9.96 -39.40 -0.39 -2.14 16 16 C -0.16 -2.15 8.25 -39.46 -0.33 -2.47 16 17 C 0.07 1.09 6.48 -39.20 -0.25 0.83 16 18 O -0.31 -3.84 9.89 -19.74 -0.20 -4.03 16 19 C 0.41 3.51 5.98 101.05 0.60 4.12 16 20 F -0.20 -2.05 15.56 2.25 0.04 -2.02 16 21 F -0.20 -1.95 15.60 2.25 0.04 -1.91 16 22 C -0.03 -0.44 6.33 -39.38 -0.25 -0.69 16 23 Cl -0.06 -0.88 28.50 -51.86 -1.48 -2.36 16 24 C -0.09 -1.57 8.47 -39.38 -0.33 -1.90 16 25 H 0.05 1.16 7.76 -51.93 -0.40 0.76 16 26 H 0.08 1.69 7.20 -51.93 -0.37 1.32 16 27 H 0.02 0.32 6.60 -51.93 -0.34 -0.02 16 28 H 0.27 6.74 8.31 -40.82 -0.34 6.41 16 29 H 0.40 6.30 6.64 -40.82 -0.27 6.03 16 30 H 0.14 1.60 8.06 -52.49 -0.42 1.18 16 31 H 0.14 1.67 5.09 -52.49 -0.27 1.40 16 32 H 0.18 0.60 8.14 -51.93 -0.42 0.18 16 33 H 0.16 3.36 6.25 -52.49 -0.33 3.03 16 LS Contribution 307.39 15.07 4.63 4.63 Total: -1.00 -31.60 307.39 -6.03 -37.63 By element: Atomic # 1 Polarization: 7.84 SS G_CDS: -2.36 Total: 5.48 kcal Atomic # 6 Polarization: 12.70 SS G_CDS: -1.90 Total: 10.79 kcal Atomic # 7 Polarization: -47.84 SS G_CDS: 0.16 Total: -47.68 kcal Atomic # 8 Polarization: -20.05 SS G_CDS: -0.12 Total: -20.17 kcal Atomic # 9 Polarization: -4.00 SS G_CDS: 0.07 Total: -3.93 kcal Atomic # 14 Polarization: 20.64 SS G_CDS: -5.02 Total: 15.62 kcal Atomic # 17 Polarization: -0.88 SS G_CDS: -1.48 Total: -2.36 kcal Total LS contribution 4.63 Total: 4.63 kcal Total: -31.60 -6.03 -37.63 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001192307459.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.996 kcal (2) G-P(sol) polarization free energy of solvation -31.598 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.595 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.030 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.628 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.625 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds