Wall clock time and date at job start Tue Mar 31 2020 12:10:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.35767 * 117.00337 * 2 1 4 4 C 1.39003 * 119.88253 * 359.97438 * 3 2 1 5 5 C 1.37661 * 120.12770 * 180.02562 * 4 3 2 6 6 C 1.40019 * 119.90467 * 0.02562 * 5 4 3 7 7 C 1.46942 * 120.11108 * 179.97438 * 6 5 4 8 8 C 1.35138 * 119.99799 * 179.97438 * 7 6 5 9 9 C 1.41808 * 120.00019 * 180.02562 * 8 7 6 10 10 O 1.21781 * 119.99850 * 359.97438 * 9 8 7 11 11 N 1.34776 * 119.99989 * 179.72668 * 9 8 7 12 12 C 1.36746 * 119.99807 * 180.27611 * 11 9 8 13 13 H 1.07993 * 120.00437 * 20.40150 * 12 11 9 14 14 C 1.39095 * 119.99793 * 200.39852 * 12 11 9 15 15 N 1.31351 * 120.00058 * 21.46530 * 14 12 11 16 16 Si 1.86800 * 120.00329 * 201.45856 * 14 12 11 17 17 H 1.48504 * 109.46857 * 0.02562 * 16 14 12 18 18 H 1.48493 * 109.47080 * 119.99909 * 16 14 12 19 19 H 1.48496 * 109.47392 * 240.00505 * 16 14 12 20 20 C 1.46503 * 120.00093 * 0.27385 * 11 9 8 21 21 C 1.47198 * 109.47090 * 83.82841 * 20 11 9 22 22 N 8.52173 * 144.52575 * 330.39971 * 2 1 3 23 23 C 1.39994 * 119.77521 * 0.25117 * 6 5 4 24 24 C 1.37771 * 119.86637 * 359.48901 * 23 6 5 25 25 Cl 1.73592 * 119.95326 * 180.23129 * 24 23 6 26 26 H 1.08997 * 109.47658 * 180.02562 * 1 2 3 27 27 H 1.08998 * 109.47437 * 300.00938 * 1 2 3 28 28 H 1.09004 * 109.46744 * 60.00301 * 1 2 3 29 29 H 1.07994 * 119.93982 * 0.04738 * 4 3 2 30 30 H 1.08003 * 120.05112 * 180.02562 * 5 4 3 31 31 H 1.08002 * 120.00629 * 0.02562 * 7 6 5 32 32 H 1.08003 * 120.00084 * 0.02562 * 8 7 6 33 33 H 0.96988 * 120.00007 * 179.97438 * 15 14 12 34 34 H 1.08999 * 109.46888 * 203.83642 * 20 11 9 35 35 H 1.09011 * 109.46738 * 323.83164 * 20 11 9 36 36 H 1.07993 * 120.06356 * 179.72622 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0454 1.2097 0.0000 4 6 1.2860 2.3739 -0.0005 5 6 1.9058 3.6031 -0.0011 6 6 3.3038 3.6800 -0.0016 7 6 3.9701 4.9896 -0.0028 8 6 5.3196 5.0612 -0.0028 9 6 5.9627 6.3250 -0.0033 10 8 5.2988 7.3460 -0.0043 11 7 7.3085 6.3964 0.0023 12 6 7.9286 7.6152 0.0074 13 1 7.3909 8.4932 0.3332 14 6 9.2519 7.7239 -0.4069 15 7 9.7762 6.8003 -1.1797 16 14 10.2836 9.1837 0.1356 17 1 9.4654 10.0755 0.9962 18 1 11.4604 8.7007 0.9016 19 1 10.7450 9.9351 -1.0593 20 6 8.1072 5.1682 0.0028 21 6 8.2552 4.6785 -1.3774 22 7 8.3688 4.3001 -2.4428 23 6 4.0647 2.5049 -0.0069 24 6 3.4347 1.2796 -0.0010 25 17 4.3760 -0.1789 -0.0015 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3634 0.5140 0.8899 28 1 -0.3633 0.5138 -0.8901 29 1 0.2077 2.3141 -0.0002 30 1 1.3145 4.5069 -0.0011 31 1 3.3815 5.8951 -0.0028 32 1 5.9084 4.1557 -0.0023 33 1 10.6989 6.8763 -1.4689 34 1 9.0916 5.3752 0.4225 35 1 7.6072 4.4100 0.6057 36 1 5.1433 2.5587 -0.0118 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491353353.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:10:02 Heat of formation + Delta-G solvation = 10.524669 kcal Electronic energy + Delta-G solvation = -23160.474270 eV Core-core repulsion = 19444.483425 eV Total energy + Delta-G solvation = -3715.990845 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 320.071 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -40.36231 -39.10298 -37.84403 -36.48174 -35.85686 -34.45087 -33.18106 -31.96211 -31.12851 -29.28846 -27.73651 -27.43231 -25.37293 -23.35626 -22.83433 -20.91484 -18.53769 -18.47455 -17.94854 -17.14303 -16.41668 -16.28862 -16.06921 -15.61415 -14.93782 -14.48350 -14.32784 -14.19511 -13.78113 -13.63198 -13.40803 -13.08225 -13.04545 -12.57016 -12.12048 -11.99608 -11.75219 -11.69988 -11.61927 -11.55077 -11.35633 -11.21469 -11.02948 -10.88101 -10.63600 -10.46011 -10.38410 -9.62978 -9.33769 -8.98326 -8.66899 -8.12670 -7.76776 -6.64129 -4.04755 0.64887 1.03940 2.09886 2.15783 2.95116 3.07082 3.17076 3.23447 3.56055 3.65001 3.92691 4.05759 4.27135 4.49892 4.59665 4.70033 4.83090 4.84322 4.90840 5.04040 5.06555 5.16377 5.22378 5.27866 5.34665 5.67982 5.79221 5.92359 5.96605 6.07933 6.21939 6.38363 6.44774 6.72537 6.85698 7.02930 7.34577 7.87107 8.20876 8.71086 8.92939 9.08426 9.70820 10.40877 Molecular weight = 320.07amu Principal moments of inertia in cm(-1) A = 0.022858 B = 0.003011 C = 0.002738 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1224.637832 B = 9296.663663 C =10223.853502 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.306 6.306 3 C 0.130 3.870 4 C -0.197 4.197 5 C -0.062 4.062 6 C -0.071 4.071 7 C -0.069 4.069 8 C -0.170 4.170 9 C 0.470 3.530 10 O -0.584 6.584 11 N -0.427 5.427 12 C -0.304 4.304 13 H 0.112 0.888 14 C 0.031 3.969 15 N -0.863 5.863 16 Si 0.929 3.071 17 H -0.265 1.265 18 H -0.277 1.277 19 H -0.281 1.281 20 C 0.218 3.782 21 C 0.242 3.758 22 N -0.465 5.465 23 C -0.067 4.067 24 C -0.064 4.064 25 Cl -0.059 7.059 26 H 0.101 0.899 27 H 0.057 0.943 28 H 0.057 0.943 29 H 0.137 0.863 30 H 0.136 0.864 31 H 0.137 0.863 32 H 0.115 0.885 33 H 0.276 0.724 34 H 0.125 0.875 35 H 0.088 0.912 36 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.608 -12.501 5.966 19.418 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.219 6.219 3 C 0.083 3.917 4 C -0.216 4.216 5 C -0.081 4.081 6 C -0.071 4.071 7 C -0.091 4.091 8 C -0.190 4.190 9 C 0.264 3.736 10 O -0.470 6.470 11 N -0.145 5.145 12 C -0.432 4.432 13 H 0.130 0.870 14 C -0.175 4.175 15 N -0.500 5.500 16 Si 0.755 3.245 17 H -0.189 1.189 18 H -0.203 1.203 19 H -0.207 1.207 20 C 0.090 3.910 21 C -0.077 4.077 22 N -0.145 5.145 23 C -0.086 4.086 24 C -0.091 4.091 25 Cl -0.030 7.030 26 H 0.119 0.881 27 H 0.075 0.925 28 H 0.075 0.925 29 H 0.155 0.845 30 H 0.154 0.846 31 H 0.154 0.846 32 H 0.133 0.867 33 H 0.087 0.913 34 H 0.143 0.857 35 H 0.106 0.894 36 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -13.350 -12.893 4.308 19.053 hybrid contribution 0.633 0.740 0.365 1.040 sum -12.718 -12.153 4.673 18.201 Atomic orbital electron populations 1.23102 0.78170 1.04118 1.01502 1.86111 1.21446 1.26099 1.88251 1.18798 0.90416 0.85083 0.97383 1.21092 1.00090 0.91534 1.08857 1.21249 0.93579 0.97424 0.95829 1.18980 0.92926 0.92793 1.02434 1.22030 0.94664 0.94726 0.97648 1.22346 0.95714 0.98333 1.02652 1.16815 0.82436 0.89254 0.85107 1.90675 1.63523 1.36994 1.55852 1.43669 1.03943 1.05340 1.61513 1.19843 0.94754 0.87035 1.41537 0.87006 1.25428 0.98118 0.99180 0.94727 1.69832 1.15775 1.35615 1.28797 0.85805 0.79295 0.80614 0.78757 1.18870 1.20280 1.20715 1.18778 0.99843 0.86885 0.85448 1.29215 0.91795 0.91208 0.95455 1.80915 1.10007 1.12003 1.11565 1.21227 1.00900 0.89219 0.97224 1.20024 0.88652 0.88756 1.11711 1.98364 1.71902 1.35629 1.97135 0.88098 0.92454 0.92460 0.84537 0.84574 0.84575 0.86698 0.91310 0.85734 0.89394 0.83824 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.16 9.81 101.05 0.99 1.16 16 2 O -0.31 -3.30 9.94 -19.01 -0.19 -3.49 16 3 C 0.13 1.53 6.69 -38.97 -0.26 1.27 16 4 C -0.20 -2.00 9.01 -39.51 -0.36 -2.36 16 5 C -0.06 -0.70 9.79 -39.12 -0.38 -1.08 16 6 C -0.07 -0.96 5.87 -105.05 -0.62 -1.57 16 7 C -0.07 -1.11 9.42 -37.16 -0.35 -1.46 16 8 C -0.17 -3.06 8.30 -39.32 -0.33 -3.38 16 9 C 0.47 10.73 7.34 -14.90 -0.11 10.62 16 10 O -0.58 -15.31 15.78 5.12 0.08 -15.23 16 11 N -0.43 -9.86 2.59 -121.13 -0.31 -10.18 16 12 C -0.30 -7.67 9.26 -15.04 -0.14 -7.81 16 13 H 0.11 2.97 7.42 -52.49 -0.39 2.58 16 14 C 0.03 0.75 4.83 -17.44 -0.08 0.66 16 15 N -0.86 -21.29 9.59 55.50 0.53 -20.76 16 16 Si 0.93 19.01 29.61 -169.99 -5.03 13.98 16 17 H -0.26 -5.41 7.11 56.52 0.40 -5.01 16 18 H -0.28 -5.50 7.11 56.52 0.40 -5.10 16 19 H -0.28 -5.92 7.11 56.52 0.40 -5.52 16 20 C 0.22 4.23 4.79 -6.83 -0.03 4.20 16 21 C 0.24 5.29 13.14 -20.75 -0.27 5.01 16 22 N -0.47 -11.02 18.54 42.16 0.78 -10.24 16 23 C -0.07 -0.90 9.18 -39.09 -0.36 -1.26 16 24 C -0.06 -0.84 6.32 -39.43 -0.25 -1.09 16 25 Cl -0.06 -0.76 28.49 -51.86 -1.48 -2.23 16 26 H 0.10 0.45 8.14 -51.93 -0.42 0.02 16 27 H 0.06 0.30 7.65 -51.93 -0.40 -0.10 16 28 H 0.06 0.31 7.65 -51.93 -0.40 -0.09 16 29 H 0.14 0.98 6.27 -52.49 -0.33 0.65 16 30 H 0.14 1.24 8.06 -52.48 -0.42 0.82 16 31 H 0.14 2.24 7.45 -52.49 -0.39 1.85 16 32 H 0.12 1.80 4.09 -52.48 -0.21 1.59 16 33 H 0.28 6.56 8.31 -40.82 -0.34 6.22 16 34 H 0.12 2.43 6.63 -51.93 -0.34 2.08 16 35 H 0.09 1.30 6.44 -51.92 -0.33 0.97 16 36 H 0.14 1.86 6.16 -52.49 -0.32 1.53 16 LS Contribution 333.86 15.07 5.03 5.03 Total: -1.00 -31.49 333.86 -6.24 -37.72 By element: Atomic # 1 Polarization: 5.59 SS G_CDS: -3.10 Total: 2.49 kcal Atomic # 6 Polarization: 5.46 SS G_CDS: -2.55 Total: 2.91 kcal Atomic # 7 Polarization: -42.18 SS G_CDS: 1.00 Total: -41.18 kcal Atomic # 8 Polarization: -18.61 SS G_CDS: -0.11 Total: -18.72 kcal Atomic # 14 Polarization: 19.01 SS G_CDS: -5.03 Total: 13.98 kcal Atomic # 17 Polarization: -0.76 SS G_CDS: -1.48 Total: -2.23 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -31.49 -6.24 -37.72 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491353353.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.249 kcal (2) G-P(sol) polarization free energy of solvation -31.488 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.760 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.236 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.724 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.525 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds