Wall clock time and date at job start Tue Mar 31 2020 12:06:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.36874 * 126.39854 * 2 1 4 4 Cl 1.73597 * 126.60223 * 0.22662 * 3 2 1 5 5 C 1.34797 * 106.80059 * 179.97438 * 3 2 1 6 6 N 1.34167 * 108.01508 * 359.97438 * 5 3 2 7 7 C 1.30470 * 109.27083 * 0.02562 * 6 5 3 8 8 C 1.50700 * 125.64542 * 180.02562 * 7 6 5 9 9 O 1.45192 * 109.47380 * 89.96870 * 8 7 6 10 10 C 1.34806 * 117.00135 * 179.97438 * 9 8 7 11 11 O 1.21534 * 119.99577 * 0.02562 * 10 9 8 12 12 C 1.47289 * 120.00125 * 180.02562 * 10 9 8 13 13 C 1.39289 * 120.28786 * 357.17025 * 12 10 9 14 14 C 1.38200 * 120.08605 * 179.97438 * 13 12 10 15 15 C 1.38842 * 120.68368 * 0.02562 * 14 13 12 16 16 C 1.37600 * 120.58017 * 359.97438 * 15 14 13 17 17 C 1.40707 * 119.88574 * 359.73677 * 16 15 14 18 18 C 1.40860 * 120.32944 * 180.25487 * 17 16 15 19 19 H 1.08005 * 120.00365 * 214.91702 * 18 17 16 20 20 C 1.40294 * 119.99914 * 34.92688 * 18 17 16 21 21 N 1.30614 * 120.00380 * 9.90726 * 20 18 17 22 22 Si 1.86806 * 120.00209 * 189.90607 * 20 18 17 23 23 H 1.48502 * 109.46953 * 359.97438 * 22 20 18 24 24 H 1.48502 * 109.47117 * 119.99630 * 22 20 18 25 25 H 1.48497 * 109.47245 * 239.99816 * 22 20 18 26 26 H 1.09003 * 109.47030 * 90.02681 * 1 2 3 27 27 H 1.09006 * 109.47544 * 210.02529 * 1 2 3 28 28 H 1.09002 * 109.47489 * 330.02584 * 1 2 3 29 29 H 1.08009 * 125.99160 * 179.97438 * 5 3 2 30 30 H 1.09001 * 109.46757 * 209.97681 * 8 7 6 31 31 H 1.09007 * 109.46641 * 329.97161 * 8 7 6 32 32 H 1.08007 * 119.95494 * 359.96341 * 13 12 10 33 33 H 1.07997 * 119.65983 * 180.02562 * 14 13 12 34 34 H 1.07994 * 119.70671 * 179.97438 * 15 14 13 35 35 H 1.07995 * 120.05705 * 179.97438 * 16 15 14 36 36 H 0.97003 * 120.00641 * 180.02562 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2772 1.1017 0.0000 4 17 1.7697 2.7618 0.0055 5 6 3.5471 0.6496 0.0006 6 7 3.5100 -0.6916 0.0015 7 6 2.2670 -1.0880 0.0010 8 6 1.8024 -2.5216 0.0022 9 8 1.6528 -2.9807 1.3715 10 6 1.2402 -4.2517 1.5492 11 8 1.0122 -4.9568 0.5859 12 6 1.0656 -4.7858 2.9107 13 6 1.3812 -4.0026 4.0184 14 6 1.2154 -4.5077 5.2940 15 6 0.7351 -5.7957 5.4891 16 6 0.4147 -6.5936 4.4147 17 6 0.5684 -6.1015 3.1055 18 6 0.2382 -6.9083 1.9991 19 1 0.8148 -6.8385 1.0885 20 6 -0.8399 -7.8024 2.0798 21 7 -1.6544 -7.7531 3.0997 22 14 -1.1106 -9.0636 0.7286 23 1 -0.0575 -8.9128 -0.3075 24 1 -1.0450 -10.4300 1.3065 25 1 -2.4448 -8.8503 0.1124 26 1 -0.3633 -0.0005 -1.0277 27 1 -0.3634 -0.8898 0.5142 28 1 -0.3634 0.8902 0.5134 29 1 4.4382 1.2600 0.0003 30 1 0.8439 -2.5933 -0.5120 31 1 2.5372 -3.1421 -0.5108 32 1 1.7563 -2.9992 3.8801 33 1 1.4618 -3.8943 6.1480 34 1 0.6120 -6.1747 6.4928 35 1 0.0422 -7.5943 4.5762 36 1 -2.3996 -8.3716 3.1557 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000922968278.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:06:12 Heat of formation + Delta-G solvation = -6.043421 kcal Electronic energy + Delta-G solvation = -23558.120449 eV Core-core repulsion = 19841.411158 eV Total energy + Delta-G solvation = -3716.709291 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 320.071 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.36926 -39.45974 -37.35866 -37.02597 -35.46606 -34.32719 -33.80891 -31.06310 -30.07821 -29.61766 -27.48511 -26.43929 -25.48023 -22.69294 -21.74069 -21.12505 -20.22877 -19.78756 -17.69746 -17.42969 -16.86985 -16.07565 -15.86172 -15.73169 -15.30331 -14.82351 -14.41827 -14.21468 -13.65159 -13.43768 -13.29146 -12.97909 -12.82783 -12.64607 -12.55512 -12.28210 -11.83743 -11.72533 -11.71669 -11.24051 -11.15106 -10.72537 -10.68022 -10.27243 -10.23993 -10.12713 -9.88838 -9.77370 -9.40629 -8.92663 -8.52088 -7.71815 -7.49198 -6.95849 -4.56807 1.32948 1.51051 2.12009 2.59232 2.72529 2.72995 3.02732 3.11782 3.14037 3.61270 3.80161 3.86640 4.33652 4.47499 4.53763 4.70559 4.87911 5.19069 5.21372 5.30576 5.46587 5.51952 5.85680 6.02584 6.07957 6.26362 6.29167 6.49527 6.71262 6.85895 6.97574 7.06682 7.17793 7.39026 7.55565 7.74926 7.82759 7.87701 8.07319 8.50799 8.65326 8.71804 8.96849 9.99126 Molecular weight = 320.07amu Principal moments of inertia in cm(-1) A = 0.018005 B = 0.003182 C = 0.002912 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1554.787561 B = 8796.935764 C = 9613.730665 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.442 5.442 3 C 0.014 3.986 4 Cl -0.009 7.009 5 C 0.008 3.992 6 N -0.459 5.459 7 C 0.232 3.768 8 C 0.154 3.846 9 O -0.364 6.364 10 C 0.508 3.492 11 O -0.514 6.514 12 C -0.250 4.250 13 C -0.036 4.036 14 C -0.246 4.246 15 C -0.089 4.089 16 C -0.148 4.148 17 C 0.149 3.851 18 C -0.421 4.421 19 H 0.112 0.888 20 C 0.070 3.930 21 N -0.784 5.784 22 Si 0.917 3.083 23 H -0.255 1.255 24 H -0.271 1.271 25 H -0.273 1.273 26 H 0.084 0.916 27 H 0.100 0.900 28 H 0.091 0.909 29 H 0.183 0.817 30 H 0.083 0.917 31 H 0.102 0.898 32 H 0.102 0.898 33 H 0.094 0.906 34 H 0.094 0.906 35 H 0.118 0.882 36 H 0.284 0.716 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.640 13.263 -4.962 14.256 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 N -0.127 5.127 3 C -0.127 4.127 4 Cl 0.019 6.981 5 C -0.143 4.143 6 N -0.179 5.179 7 C -0.029 4.029 8 C 0.078 3.922 9 O -0.282 6.282 10 C 0.359 3.641 11 O -0.404 6.404 12 C -0.253 4.253 13 C -0.054 4.054 14 C -0.265 4.265 15 C -0.108 4.108 16 C -0.167 4.167 17 C 0.145 3.855 18 C -0.448 4.448 19 H 0.130 0.870 20 C -0.150 4.150 21 N -0.409 5.409 22 Si 0.741 3.259 23 H -0.178 1.178 24 H -0.196 1.196 25 H -0.198 1.198 26 H 0.103 0.897 27 H 0.119 0.881 28 H 0.109 0.891 29 H 0.200 0.800 30 H 0.101 0.899 31 H 0.120 0.880 32 H 0.120 0.880 33 H 0.112 0.888 34 H 0.112 0.888 35 H 0.136 0.864 36 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 1.805 12.567 -5.180 13.712 hybrid contribution -1.202 0.393 -0.525 1.369 sum 0.604 12.960 -5.705 14.173 Atomic orbital electron populations 1.22260 0.75554 1.05933 1.04318 1.45148 1.08237 1.05387 1.53977 1.21789 0.91304 0.82329 1.17308 1.98375 1.91785 1.10425 1.97525 1.22223 0.94493 0.90954 1.06598 1.70431 1.18244 1.10719 1.18500 1.22704 0.85434 0.89518 1.05270 1.20721 1.02006 0.85314 0.84188 1.86664 1.80670 1.32838 1.28061 1.21412 0.73962 0.77660 0.91097 1.90730 1.49066 1.57845 1.42805 1.18691 1.22942 0.96238 0.87420 1.20834 0.95136 0.97128 0.92319 1.20371 1.13170 0.97484 0.95477 1.20866 0.98117 0.94339 0.97472 1.21292 1.03821 0.99926 0.91618 1.17450 0.86385 0.88377 0.93266 1.20415 1.10250 1.13432 1.00720 0.87013 1.26190 0.95240 0.96781 0.96790 1.69713 1.11088 1.31831 1.28251 0.86091 0.79411 0.79338 0.81053 1.17822 1.19650 1.19790 0.89723 0.88128 0.89059 0.80015 0.89894 0.87987 0.88038 0.88764 0.88783 0.86368 0.90458 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.58 10.66 59.85 0.64 1.21 16 2 N -0.44 -5.64 3.15 -117.77 -0.37 -6.01 16 3 C 0.01 0.17 7.49 -16.52 -0.12 0.04 16 4 Cl -0.01 -0.09 28.93 -51.86 -1.50 -1.59 16 5 C 0.01 0.11 11.86 -17.75 -0.21 -0.10 16 6 N -0.46 -7.30 11.25 -10.75 -0.12 -7.42 16 7 C 0.23 3.52 7.55 -155.33 -1.17 2.35 16 8 C 0.15 2.47 5.56 36.01 0.20 2.67 16 9 O -0.36 -7.19 9.46 -40.78 -0.39 -7.58 16 10 C 0.51 11.70 7.86 34.41 0.27 11.97 16 11 O -0.51 -12.63 13.30 -19.29 -0.26 -12.89 16 12 C -0.25 -6.11 5.92 -104.39 -0.62 -6.73 16 13 C -0.04 -0.79 9.60 -39.20 -0.38 -1.17 16 14 C -0.25 -5.24 10.03 -39.37 -0.39 -5.63 16 15 C -0.09 -1.96 10.01 -39.59 -0.40 -2.35 16 16 C -0.15 -3.62 8.62 -38.88 -0.34 -3.96 16 17 C 0.15 3.88 5.49 -106.53 -0.59 3.29 16 18 C -0.42 -11.04 7.78 -37.82 -0.29 -11.33 16 19 H 0.11 3.02 5.72 -52.48 -0.30 2.72 16 20 C 0.07 1.70 5.24 -17.30 -0.09 1.61 16 21 N -0.78 -19.34 11.23 55.57 0.62 -18.72 16 22 Si 0.92 18.57 29.57 -169.99 -5.03 13.54 16 23 H -0.25 -5.25 7.11 56.52 0.40 -4.85 16 24 H -0.27 -5.28 7.11 56.52 0.40 -4.88 16 25 H -0.27 -5.43 7.11 56.52 0.40 -5.03 16 26 H 0.08 0.63 8.14 -51.93 -0.42 0.20 16 27 H 0.10 1.00 7.66 -51.93 -0.40 0.60 16 28 H 0.09 0.72 7.92 -51.93 -0.41 0.31 16 29 H 0.18 1.80 8.06 -52.48 -0.42 1.38 16 30 H 0.08 1.19 7.70 -51.93 -0.40 0.79 16 31 H 0.10 1.64 8.14 -51.93 -0.42 1.22 16 32 H 0.10 2.07 7.60 -52.48 -0.40 1.67 16 33 H 0.09 1.75 8.06 -52.49 -0.42 1.33 16 34 H 0.09 1.80 8.06 -52.49 -0.42 1.37 16 35 H 0.12 2.93 6.68 -52.49 -0.35 2.58 16 36 H 0.28 6.32 8.29 -40.82 -0.34 5.98 16 LS Contribution 333.93 15.07 5.03 5.03 Total: -1.00 -29.35 333.93 -9.00 -38.35 By element: Atomic # 1 Polarization: 8.90 SS G_CDS: -3.51 Total: 5.39 kcal Atomic # 6 Polarization: -4.63 SS G_CDS: -3.49 Total: -8.12 kcal Atomic # 7 Polarization: -32.28 SS G_CDS: 0.13 Total: -32.14 kcal Atomic # 8 Polarization: -19.82 SS G_CDS: -0.64 Total: -20.46 kcal Atomic # 14 Polarization: 18.57 SS G_CDS: -5.03 Total: 13.54 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -1.50 Total: -1.59 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -29.35 -9.00 -38.35 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000922968278.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.310 kcal (2) G-P(sol) polarization free energy of solvation -29.352 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.958 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.001 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.353 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.043 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds