Wall clock time and date at job start Tue Mar 31 2020 12:09:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35780 * 117.00003 * 2 1 4 4 C 1.38768 * 119.86465 * 359.97270 * 3 2 1 5 5 C 1.38341 * 120.05424 * 179.76512 * 4 3 2 6 6 O 1.35739 * 120.10848 * 180.27629 * 5 4 3 7 7 C 1.42903 * 117.00073 * 0.25599 * 6 5 4 8 8 C 1.40413 * 119.78388 * 0.53546 * 5 4 3 9 9 C 1.47430 * 120.13385 * 179.74668 * 8 5 4 10 10 N 1.33110 * 120.55381 * 307.75073 * 9 8 5 11 11 C 1.31897 * 120.02159 * 180.02562 * 10 9 8 12 12 C 1.39026 * 121.23435 * 359.97438 * 11 10 9 13 13 N 1.31519 * 121.16048 * 0.02562 * 12 11 10 14 14 C 1.34095 * 119.86279 * 0.02562 * 13 12 11 15 15 C 1.40669 * 120.58333 * 180.02562 * 14 13 12 16 16 H 1.08001 * 119.99996 * 184.51379 * 15 14 13 17 17 C 1.40137 * 119.99970 * 4.51907 * 15 14 13 18 18 N 1.30712 * 119.99937 * 359.97438 * 17 15 14 19 19 Si 1.86804 * 120.00002 * 179.97438 * 17 15 14 20 20 H 1.48494 * 109.46826 * 359.97438 * 19 17 15 21 21 H 1.48493 * 109.47214 * 119.99753 * 19 17 15 22 22 H 1.48504 * 109.46884 * 239.99960 * 19 17 15 23 23 C 1.39850 * 119.73098 * 359.46435 * 8 5 4 24 24 C 1.37713 * 119.94583 * 0.25663 * 23 8 5 25 25 Cl 1.73601 * 119.89168 * 179.97438 * 24 23 8 26 26 H 1.08993 * 109.47453 * 300.00636 * 1 2 3 27 27 H 1.09005 * 109.47229 * 60.00331 * 1 2 3 28 28 H 1.09000 * 109.47202 * 179.97438 * 1 2 3 29 29 H 1.08003 * 119.97546 * 0.02562 * 4 3 2 30 30 H 1.08991 * 109.47356 * 300.00090 * 7 6 5 31 31 H 1.09000 * 109.47072 * 60.00338 * 7 6 5 32 32 H 1.08998 * 109.46943 * 179.97438 * 7 6 5 33 33 H 1.08002 * 119.37600 * 179.97438 * 11 10 9 34 34 H 1.08006 * 119.41904 * 179.72293 * 12 11 10 35 35 H 0.97001 * 119.99896 * 180.02562 * 18 17 15 36 36 H 1.08007 * 120.02603 * 180.23484 * 23 8 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0454 1.2098 0.0000 4 6 1.2869 2.3718 -0.0006 5 6 1.9108 3.6065 0.0043 6 8 1.1699 4.7439 0.0094 7 6 -0.2511 4.5925 0.0151 8 6 3.3131 3.6794 -0.0015 9 6 3.9860 4.9912 -0.0020 10 7 3.6666 5.9152 -0.9053 11 6 4.2757 7.0851 -0.8964 12 6 5.2549 7.3809 0.0452 13 7 5.6075 6.5032 0.9591 14 6 5.0181 5.2992 0.9910 15 6 5.3831 4.3492 1.9622 16 1 4.9559 3.3577 1.9350 17 6 6.3010 4.6895 2.9650 18 7 6.8183 5.8894 2.9976 19 14 6.7851 3.4282 4.2551 20 1 6.0635 2.1559 3.9987 21 1 8.2492 3.1894 4.1890 22 1 6.4269 3.9369 5.6035 23 6 4.0687 2.5026 -0.0009 24 6 3.4361 1.2794 0.0001 25 17 4.3755 -0.1805 0.0002 26 1 -0.3634 0.5139 0.8898 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 0.2085 2.3123 -0.0006 30 1 -0.5617 4.0446 -0.8744 31 1 -0.5542 4.0415 0.9054 32 1 -0.7212 5.5759 0.0193 33 1 4.0087 7.8270 -1.6344 34 1 5.7380 8.3466 0.0227 35 1 7.4540 6.1248 3.6915 36 1 5.1476 2.5532 -0.0015 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001245724965.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:09:41 Heat of formation + Delta-G solvation = -11.123133 kcal Electronic energy + Delta-G solvation = -24441.373211 eV Core-core repulsion = 20724.443647 eV Total energy + Delta-G solvation = -3716.929564 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 320.071 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -40.26836 -38.78606 -38.34896 -36.61660 -35.59081 -34.14946 -32.24967 -31.10549 -29.81481 -28.74986 -27.86048 -26.53808 -25.89062 -23.15817 -22.13511 -21.59141 -20.78068 -18.55121 -17.66438 -16.85581 -16.22649 -16.06515 -15.81989 -15.65304 -15.25343 -14.82942 -14.50807 -14.25675 -14.03502 -13.64615 -13.10530 -12.91708 -12.64178 -12.57591 -11.89981 -11.75105 -11.59279 -11.49798 -11.42716 -11.28976 -11.25890 -11.05713 -10.74404 -10.43312 -10.31050 -9.94781 -9.85182 -9.53342 -9.14107 -8.39958 -7.91110 -7.48273 -7.15295 -6.57609 -4.74273 1.54622 1.64358 2.45871 2.62156 2.94571 2.99626 3.06019 3.22743 3.32441 3.63133 3.78600 4.03120 4.58280 4.91625 5.01070 5.10074 5.11894 5.27728 5.28225 5.37443 5.41024 5.58829 5.61863 5.78009 5.94721 6.00447 6.20768 6.25462 6.27664 6.56883 6.66451 6.83049 6.92072 6.96085 7.18577 7.34176 7.65372 7.80230 7.97604 8.31914 8.60354 9.26115 9.81621 10.00349 Molecular weight = 320.07amu Principal moments of inertia in cm(-1) A = 0.010580 B = 0.006137 C = 0.004487 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2645.818313 B = 4561.731426 C = 6238.462397 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.306 6.306 3 C 0.154 3.846 4 C -0.292 4.292 5 C 0.179 3.821 6 O -0.284 6.284 7 C 0.026 3.974 8 C -0.018 4.018 9 C -0.023 4.023 10 N -0.397 5.397 11 C -0.127 4.127 12 C 0.092 3.908 13 N -0.461 5.461 14 C 0.224 3.776 15 C -0.395 4.395 16 H 0.098 0.902 17 C 0.065 3.935 18 N -0.699 5.699 19 Si 0.906 3.094 20 H -0.252 1.252 21 H -0.268 1.268 22 H -0.270 1.270 23 C -0.025 4.025 24 C -0.099 4.099 25 Cl -0.072 7.072 26 H 0.054 0.946 27 H 0.053 0.947 28 H 0.098 0.902 29 H 0.136 0.864 30 H 0.050 0.950 31 H 0.050 0.950 32 H 0.096 0.904 33 H 0.124 0.876 34 H 0.127 0.873 35 H 0.279 0.721 36 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.714 -7.589 -2.068 12.499 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.219 6.219 3 C 0.108 3.892 4 C -0.312 4.312 5 C 0.131 3.869 6 O -0.196 6.196 7 C -0.070 4.070 8 C -0.021 4.021 9 C -0.172 4.172 10 N -0.108 5.108 11 C -0.287 4.287 12 C -0.078 4.078 13 N -0.177 5.177 14 C 0.098 3.902 15 C -0.425 4.425 16 H 0.116 0.884 17 C -0.163 4.163 18 N -0.318 5.318 19 Si 0.729 3.271 20 H -0.175 1.175 21 H -0.193 1.193 22 H -0.195 1.195 23 C -0.045 4.045 24 C -0.127 4.127 25 Cl -0.044 7.044 26 H 0.072 0.928 27 H 0.072 0.928 28 H 0.116 0.884 29 H 0.154 0.846 30 H 0.069 0.931 31 H 0.068 0.932 32 H 0.115 0.885 33 H 0.141 0.859 34 H 0.144 0.856 35 H 0.091 0.909 36 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -9.313 -7.489 -1.938 12.107 hybrid contribution -0.255 -0.399 0.588 0.754 sum -9.568 -7.887 -1.351 12.473 Atomic orbital electron populations 1.23021 0.78870 1.03624 1.01209 1.86095 1.20898 1.26313 1.88589 1.18307 0.90054 0.84083 0.96759 1.20965 0.99935 0.91304 1.18962 1.18936 0.90681 0.84287 0.92964 1.86288 1.17638 1.28261 1.87378 1.23025 0.79935 1.03468 1.00561 1.17436 0.88155 0.92154 1.04343 1.20783 1.02818 0.93333 1.00293 1.67766 1.21816 1.00586 1.20657 1.22351 1.04623 0.96383 1.05371 1.23382 0.94187 0.98608 0.91645 1.69577 1.26052 1.01488 1.20612 1.20349 0.88083 0.90821 0.90918 1.19799 1.17981 0.98850 1.05842 0.88429 1.26224 0.95203 0.96081 0.98837 1.70084 1.16736 1.18116 1.26894 0.86243 0.79509 0.81481 0.79876 1.17489 1.19288 1.19461 1.20898 1.00859 0.87938 0.94830 1.19768 0.88086 0.88156 1.16663 1.98314 1.72413 1.36120 1.97526 0.92786 0.92834 0.88386 0.84633 0.93110 0.93189 0.88520 0.85863 0.85586 0.90932 0.83167 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.27 9.81 101.05 0.99 1.26 16 2 O -0.31 -4.47 9.93 -19.05 -0.19 -4.66 16 3 C 0.15 2.58 6.69 -39.01 -0.26 2.32 16 4 C -0.29 -4.71 8.01 -39.35 -0.32 -5.02 16 5 C 0.18 3.49 6.68 -38.73 -0.26 3.23 16 6 O -0.28 -5.43 9.60 -18.92 -0.18 -5.61 16 7 C 0.03 0.33 9.81 101.05 0.99 1.32 16 8 C -0.02 -0.40 5.21 -104.73 -0.55 -0.95 16 9 C -0.02 -0.57 6.13 -80.24 -0.49 -1.07 16 10 N -0.40 -9.86 10.00 -7.88 -0.08 -9.94 16 11 C -0.13 -2.96 11.17 -17.23 -0.19 -3.16 16 12 C 0.09 2.19 11.17 -17.39 -0.19 1.99 16 13 N -0.46 -12.39 8.08 -9.55 -0.08 -12.47 16 14 C 0.22 5.95 6.68 -82.63 -0.55 5.40 16 15 C -0.39 -9.97 8.24 -37.95 -0.31 -10.28 16 16 H 0.10 2.32 5.41 -52.49 -0.28 2.04 16 17 C 0.06 1.56 5.50 -17.32 -0.10 1.46 16 18 N -0.70 -17.60 11.51 55.56 0.64 -16.96 16 19 Si 0.91 17.75 29.56 -169.99 -5.03 12.73 16 20 H -0.25 -4.89 7.11 56.52 0.40 -4.48 16 21 H -0.27 -5.14 7.11 56.52 0.40 -4.74 16 22 H -0.27 -5.20 7.11 56.52 0.40 -4.80 16 23 C -0.03 -0.51 7.43 -39.17 -0.29 -0.80 16 24 C -0.10 -1.81 6.33 -39.40 -0.25 -2.06 16 25 Cl -0.07 -1.20 28.48 -51.86 -1.48 -2.68 16 26 H 0.05 0.48 7.65 -51.93 -0.40 0.08 16 27 H 0.05 0.47 7.65 -51.93 -0.40 0.07 16 28 H 0.10 0.71 8.14 -51.93 -0.42 0.29 16 29 H 0.14 1.72 4.50 -52.48 -0.24 1.48 16 30 H 0.05 0.55 7.65 -51.93 -0.40 0.16 16 31 H 0.05 0.55 7.67 -51.93 -0.40 0.15 16 32 H 0.10 1.05 8.14 -51.93 -0.42 0.63 16 33 H 0.12 2.49 8.06 -52.49 -0.42 2.06 16 34 H 0.13 2.58 8.06 -52.48 -0.42 2.16 16 35 H 0.28 6.30 8.29 -40.82 -0.34 5.96 16 36 H 0.15 3.04 7.44 -52.48 -0.39 2.65 16 LS Contribution 326.00 15.07 4.91 4.91 Total: -1.00 -30.74 326.00 -6.58 -37.32 By element: Atomic # 1 Polarization: 7.03 SS G_CDS: -3.33 Total: 3.71 kcal Atomic # 6 Polarization: -4.57 SS G_CDS: -1.78 Total: -6.35 kcal Atomic # 7 Polarization: -39.85 SS G_CDS: 0.48 Total: -39.37 kcal Atomic # 8 Polarization: -9.90 SS G_CDS: -0.37 Total: -10.27 kcal Atomic # 14 Polarization: 17.75 SS G_CDS: -5.03 Total: 12.73 kcal Atomic # 17 Polarization: -1.20 SS G_CDS: -1.48 Total: -2.68 kcal Total LS contribution 4.91 Total: 4.91 kcal Total: -30.74 -6.58 -37.32 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001245724965.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.194 kcal (2) G-P(sol) polarization free energy of solvation -30.737 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.543 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.580 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.317 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.123 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds