Wall clock time and date at job start Tue Mar 31 2020 12:39:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13594 * 1 3 3 C 1.47205 * 179.97438 * 2 1 4 4 N 1.46497 * 109.47025 * 12.49123 * 3 2 1 5 5 C 1.36885 * 119.99914 * 79.01675 * 4 3 2 6 6 H 1.08005 * 120.00259 * 225.74021 * 5 4 3 7 7 C 1.39041 * 120.00105 * 45.74133 * 5 4 3 8 8 N 1.31373 * 119.99800 * 52.15635 * 7 5 4 9 9 Si 1.86792 * 119.99808 * 232.15870 * 7 5 4 10 10 H 1.48499 * 109.47351 * 359.97438 * 9 7 5 11 11 H 1.48498 * 109.47155 * 119.99784 * 9 7 5 12 12 H 1.48504 * 109.46766 * 239.99823 * 9 7 5 13 13 C 1.34777 * 120.00073 * 259.01547 * 4 3 2 14 14 O 1.21632 * 119.99807 * 172.61166 * 13 4 3 15 15 C 1.47481 * 119.99843 * 352.33438 * 13 4 3 16 16 C 1.40234 * 119.94630 * 34.38943 * 15 13 4 17 17 C 1.36160 * 120.51644 * 179.97438 * 16 15 13 18 18 C 1.40040 * 120.08733 * 0.02562 * 17 16 15 19 19 N 1.35540 * 133.39130 * 179.97438 * 18 17 16 20 20 C 1.30236 * 109.70992 * 179.97438 * 19 18 17 21 21 C 1.50700 * 124.92358 * 180.02562 * 20 19 18 22 22 F 1.39898 * 109.46613 * 119.97926 * 21 20 19 23 23 F 1.39899 * 109.47223 * 239.97754 * 21 20 19 24 24 N 1.35857 * 110.14660 * 0.02562 * 20 19 18 25 25 H 0.96999 * 126.36816 * 179.97438 * 24 20 19 26 26 C 1.38190 * 107.26762 * 0.02562 * 24 20 19 27 27 C 1.38405 * 134.01520 * 180.33582 * 26 24 20 28 28 H 1.09001 * 109.47170 * 252.49346 * 3 2 1 29 29 H 1.08999 * 109.46846 * 132.49259 * 3 2 1 30 30 H 0.97003 * 119.99743 * 180.02562 * 8 7 5 31 31 H 1.07998 * 119.73795 * 0.02562 * 16 15 13 32 32 H 1.08000 * 119.95774 * 179.97438 * 17 16 15 33 33 H 1.08995 * 109.47521 * 359.97438 * 21 20 19 34 34 H 1.07993 * 120.22022 * 359.89966 * 27 26 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0969 -1.3476 -0.2987 5 6 3.1123 -1.7994 -1.5908 6 1 2.7458 -2.7889 -1.8213 7 6 3.5997 -0.9845 -2.6065 8 7 4.7863 -0.4322 -2.4930 9 14 2.5675 -0.6752 -4.1322 10 1 1.2807 -1.4072 -4.0161 11 1 2.2998 0.7797 -4.2621 12 1 3.3016 -1.1525 -5.3316 13 6 3.5316 -2.1432 0.6986 14 8 3.8104 -3.3052 0.4719 15 6 3.6749 -1.6031 2.0634 16 6 2.7782 -0.6308 2.5293 17 6 2.8995 -0.1246 3.7875 18 6 3.9254 -0.5729 4.6287 19 7 4.2911 -0.2648 5.8969 20 6 5.3326 -0.9689 6.2371 21 6 6.0223 -0.8981 7.5751 22 9 5.9818 -2.1552 8.1876 23 9 7.3542 -0.5106 7.3932 24 7 5.7069 -1.7765 5.2107 25 1 6.4519 -2.3977 5.2099 26 6 4.8296 -1.5478 4.1678 27 6 4.6992 -2.0636 2.8901 28 1 2.9712 0.3100 0.9801 29 1 2.9710 0.6950 -0.7578 30 1 5.1262 0.1366 -3.2014 31 1 1.9847 -0.2815 1.8853 32 1 2.2041 0.6242 4.1369 33 1 5.5151 -0.1693 8.2073 34 1 5.3878 -2.8158 2.5347 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000609029275.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:39:14 Heat of formation + Delta-G solvation = 7.939662 kcal Electronic energy + Delta-G solvation = -25601.954998 eV Core-core repulsion = 21366.348130 eV Total energy + Delta-G solvation = -4235.606868 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 320.083 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -49.56601 -47.56871 -42.32450 -39.49877 -36.69480 -36.31531 -34.67305 -33.41013 -32.46170 -30.67160 -30.10844 -27.95697 -27.24688 -25.14459 -22.78442 -22.61127 -21.48332 -19.87626 -18.52986 -18.39082 -18.21077 -17.84430 -17.17066 -16.84144 -16.34065 -15.44264 -15.42820 -15.23258 -14.87297 -14.48523 -14.39517 -13.91951 -13.91486 -13.79412 -13.65531 -13.30242 -13.18137 -12.46385 -12.33064 -12.18790 -12.00612 -11.82794 -11.69171 -11.58902 -11.32778 -10.94565 -10.81041 -10.59725 -10.46015 -10.29752 -9.13385 -8.72413 -8.48976 -8.20343 -7.92888 -6.83486 -4.13516 0.60613 1.39028 2.29057 2.33646 2.90592 2.94999 3.09473 3.17705 3.19482 3.28690 3.47472 3.59767 3.91100 4.11029 4.20830 4.33919 4.37022 4.44063 4.58419 4.77297 4.90410 5.12112 5.22267 5.30997 5.36972 5.54255 5.69218 6.00826 6.05453 6.26324 6.34401 6.50261 6.69751 6.96748 7.27167 7.46475 7.95115 8.07631 8.20840 8.88604 9.01268 9.67917 10.14684 Molecular weight = 320.08amu Principal moments of inertia in cm(-1) A = 0.024585 B = 0.003142 C = 0.002984 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1138.651245 B = 8908.606689 C = 9380.013044 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.441 5.441 2 C 0.206 3.794 3 C 0.167 3.833 4 N -0.421 5.421 5 C -0.378 4.378 6 H 0.099 0.901 7 C 0.088 3.912 8 N -0.781 5.781 9 Si 0.864 3.136 10 H -0.260 1.260 11 H -0.274 1.274 12 H -0.277 1.277 13 C 0.506 3.494 14 O -0.550 6.550 15 C -0.071 4.071 16 C -0.127 4.127 17 C -0.059 4.059 18 C 0.045 3.955 19 N -0.451 5.451 20 C 0.194 3.806 21 C 0.360 3.640 22 F -0.189 7.189 23 F -0.188 7.188 24 N -0.575 5.575 25 H 0.428 0.572 26 C 0.065 3.935 27 C -0.067 4.067 28 H 0.130 0.870 29 H 0.112 0.888 30 H 0.274 0.726 31 H 0.146 0.854 32 H 0.136 0.864 33 H 0.153 0.847 34 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.383 4.213 16.072 17.184 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.120 5.120 2 C -0.112 4.112 3 C 0.040 3.960 4 N -0.141 5.141 5 C -0.502 4.502 6 H 0.116 0.884 7 C -0.129 4.129 8 N -0.409 5.409 9 Si 0.686 3.314 10 H -0.184 1.184 11 H -0.199 1.199 12 H -0.203 1.203 13 C 0.295 3.705 14 O -0.431 6.431 15 C -0.077 4.077 16 C -0.147 4.147 17 C -0.078 4.078 18 C -0.074 4.074 19 N -0.172 5.172 20 C -0.074 4.074 21 C 0.304 3.696 22 F -0.170 7.170 23 F -0.170 7.170 24 N -0.187 5.187 25 H 0.268 0.732 26 C -0.045 4.045 27 C -0.089 4.089 28 H 0.147 0.853 29 H 0.130 0.870 30 H 0.084 0.916 31 H 0.163 0.837 32 H 0.154 0.846 33 H 0.170 0.830 34 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 2.608 4.331 16.360 17.123 hybrid contribution 1.019 -0.626 -1.401 1.842 sum 3.627 3.705 14.959 15.832 Atomic orbital electron populations 1.81066 1.13234 1.08380 1.09364 1.30057 0.95916 0.92812 0.92442 1.19926 0.80216 0.90430 1.05415 1.43063 1.53198 1.11174 1.06653 1.18917 1.46879 1.04746 0.79643 0.88390 1.25282 0.92724 0.96143 0.98747 1.70563 1.11181 1.24495 1.34648 0.86956 0.83020 0.78949 0.82428 1.18362 1.19885 1.20250 1.18241 0.80877 0.87598 0.83747 1.90669 1.52655 1.16562 1.83178 1.20247 0.95308 0.96562 0.95544 1.21429 1.00324 0.97209 0.95787 1.19918 0.95999 1.00135 0.91782 1.18989 0.98503 0.98718 0.91186 1.70113 1.10652 1.23390 1.13076 1.23539 0.96888 0.94710 0.92292 1.19649 0.78974 0.83353 0.87619 1.93071 1.96353 1.44063 1.83517 1.93074 1.36924 1.90894 1.96067 1.42702 1.28095 1.36432 1.11456 0.73240 1.18789 0.93706 1.00941 0.91114 1.19927 0.99542 1.00335 0.89118 0.85342 0.87011 0.91556 0.83706 0.84595 0.82995 0.84462 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.44 -8.72 18.54 42.15 0.78 -7.94 16 2 C 0.21 3.81 13.78 -20.76 -0.29 3.53 16 3 C 0.17 3.00 5.27 -6.83 -0.04 2.97 16 4 N -0.42 -9.47 2.58 -119.13 -0.31 -9.78 16 5 C -0.38 -9.57 8.41 -15.00 -0.13 -9.70 16 6 H 0.10 2.70 8.00 -52.48 -0.42 2.28 16 7 C 0.09 2.10 4.25 -17.45 -0.07 2.03 16 8 N -0.78 -18.91 13.95 55.50 0.77 -18.13 16 9 Si 0.86 18.27 29.69 -169.99 -5.05 13.22 16 10 H -0.26 -5.73 7.11 56.52 0.40 -5.32 16 11 H -0.27 -5.61 7.11 56.52 0.40 -5.21 16 12 H -0.28 -5.85 7.11 56.52 0.40 -5.45 16 13 C 0.51 11.41 7.34 -12.49 -0.09 11.32 16 14 O -0.55 -14.44 16.73 5.25 0.09 -14.35 16 15 C -0.07 -1.28 5.51 -104.93 -0.58 -1.86 16 16 C -0.13 -1.93 7.32 -39.58 -0.29 -2.22 16 17 C -0.06 -0.81 10.03 -39.65 -0.40 -1.21 16 18 C 0.05 0.67 7.23 -84.61 -0.61 0.06 16 19 N -0.45 -6.11 11.26 -8.18 -0.09 -6.20 16 20 C 0.19 2.19 7.51 -154.89 -1.16 1.03 16 21 C 0.36 2.82 5.86 36.01 0.21 3.03 16 22 F -0.19 -1.65 17.32 2.25 0.04 -1.61 16 23 F -0.19 -1.64 17.32 2.25 0.04 -1.60 16 24 N -0.58 -6.67 6.23 -8.03 -0.05 -6.72 16 25 H 0.43 3.74 8.96 -40.82 -0.37 3.38 16 26 C 0.06 0.94 7.29 -83.99 -0.61 0.32 16 27 C -0.07 -1.09 9.62 -39.07 -0.38 -1.47 16 28 H 0.13 1.93 3.98 -51.93 -0.21 1.72 16 29 H 0.11 1.99 7.32 -51.93 -0.38 1.61 16 30 H 0.27 6.06 8.31 -40.82 -0.34 5.72 16 31 H 0.15 2.15 3.66 -52.49 -0.19 1.96 16 32 H 0.14 1.54 8.06 -52.49 -0.42 1.11 16 33 H 0.15 0.72 8.14 -51.93 -0.42 0.30 16 34 H 0.14 2.20 7.97 -52.49 -0.42 1.78 16 LS Contribution 318.78 15.07 4.80 4.80 Total: -1.00 -31.21 318.78 -5.37 -36.57 By element: Atomic # 1 Polarization: 5.85 SS G_CDS: -1.96 Total: 3.89 kcal Atomic # 6 Polarization: 12.27 SS G_CDS: -4.43 Total: 7.84 kcal Atomic # 7 Polarization: -49.87 SS G_CDS: 1.11 Total: -48.77 kcal Atomic # 8 Polarization: -14.44 SS G_CDS: 0.09 Total: -14.35 kcal Atomic # 9 Polarization: -3.29 SS G_CDS: 0.08 Total: -3.21 kcal Atomic # 14 Polarization: 18.27 SS G_CDS: -5.05 Total: 13.22 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -31.21 -5.37 -36.57 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000609029275.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.514 kcal (2) G-P(sol) polarization free energy of solvation -31.208 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.306 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.366 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.574 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.940 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds