Wall clock time and date at job start Tue Mar 31 2020 13:38:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53004 * 109.46894 * 2 1 4 4 N 1.46500 * 109.47038 * 179.97438 * 3 2 1 5 5 C 1.36823 * 120.00383 * 266.77557 * 4 3 2 6 6 H 1.07993 * 120.00223 * 139.64586 * 5 4 3 7 7 C 1.39049 * 119.99870 * 319.65222 * 5 4 3 8 8 N 1.31371 * 119.99885 * 342.58589 * 7 5 4 9 9 Si 1.86801 * 119.99806 * 162.58120 * 7 5 4 10 10 H 1.48494 * 109.47183 * 60.00161 * 9 7 5 11 11 H 1.48507 * 109.46777 * 180.02562 * 9 7 5 12 12 H 1.48498 * 109.47279 * 299.99801 * 9 7 5 13 13 C 1.34783 * 120.00025 * 86.77967 * 4 3 2 14 14 O 1.21724 * 119.99715 * 4.37474 * 13 4 3 15 15 C 1.46717 * 119.99950 * 184.37206 * 13 4 3 16 16 C 1.36165 * 125.47218 * 257.81659 * 15 13 4 17 17 Cl 1.73604 * 126.15336 * 0.02562 * 16 15 13 18 18 C 1.41666 * 107.70038 * 180.02562 * 16 15 13 19 19 C 1.40099 * 133.33406 * 180.02562 * 18 16 15 20 20 C 1.36449 * 119.83615 * 179.97438 * 19 18 16 21 21 C 1.38926 * 120.61086 * 0.02562 * 20 19 18 22 22 C 1.37700 * 120.64053 * 0.02562 * 21 20 19 23 23 C 1.39208 * 119.81690 * 359.66471 * 22 21 20 24 24 N 1.37553 * 133.11167 * 179.57789 * 23 22 21 25 25 C 1.46503 * 125.60700 * 0.80487 * 24 23 22 26 26 H 1.09005 * 109.47060 * 180.02562 * 1 2 3 27 27 H 1.09003 * 109.47148 * 299.99632 * 1 2 3 28 28 H 1.08999 * 109.47179 * 60.00287 * 1 2 3 29 29 H 1.09003 * 109.47636 * 240.00163 * 2 1 3 30 30 H 1.08999 * 109.47179 * 119.99713 * 2 1 3 31 31 H 1.08998 * 109.47375 * 60.00167 * 3 2 1 32 32 H 1.08999 * 109.47386 * 300.00184 * 3 2 1 33 33 H 0.96998 * 119.99834 * 180.02562 * 8 7 5 34 34 H 1.08008 * 120.08165 * 0.02562 * 19 18 16 35 35 H 1.08008 * 119.69248 * 179.97438 * 20 19 18 36 36 H 1.07997 * 119.67980 * 179.97438 * 21 20 19 37 37 H 1.07995 * 120.08766 * 180.02562 * 22 21 20 38 38 H 1.09005 * 109.47175 * 264.68168 * 25 24 23 39 39 H 1.08991 * 109.47204 * 24.68411 * 25 24 23 40 40 H 1.08998 * 109.46818 * 144.68946 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 7 3.5049 1.4426 0.0006 5 6 4.1886 1.5094 1.1839 6 1 5.0758 0.9111 1.3295 7 6 3.7411 2.3477 2.1990 8 7 2.8925 3.3131 1.9274 9 14 4.3463 2.1009 3.9490 10 1 5.8234 2.2482 3.9872 11 1 3.7239 3.1165 4.8358 12 1 3.9721 0.7415 4.4151 13 6 4.1794 1.3769 -1.1645 14 8 3.5738 1.3978 -2.2202 15 6 5.6433 1.2801 -1.1603 16 6 6.5037 2.3051 -1.4116 17 17 6.0645 3.9417 -1.7893 18 6 7.8218 1.7960 -1.3094 19 6 9.0896 2.3727 -1.4604 20 6 10.2074 1.6077 -1.2953 21 6 10.1013 0.2592 -0.9786 22 6 8.8665 -0.3308 -0.8259 23 6 7.7115 0.4303 -0.9830 24 7 6.3711 0.1321 -0.9030 25 6 5.8071 -1.1829 -0.5882 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 1.8934 -0.5138 -0.8900 30 1 1.8933 -0.5138 0.8900 31 1 1.6766 1.9564 0.8900 32 1 1.6766 1.9564 -0.8899 33 1 2.5805 3.8980 2.6355 34 1 9.1820 3.4203 -1.7062 35 1 11.1836 2.0546 -1.4127 36 1 10.9960 -0.3323 -0.8517 37 1 8.7945 -1.3797 -0.5793 38 1 5.5723 -1.7086 -1.5138 39 1 6.5319 -1.7615 -0.0156 40 1 4.8974 -1.0569 -0.0011 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000060556026.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:38:54 Heat of formation + Delta-G solvation = 19.827543 kcal Electronic energy + Delta-G solvation = -25242.646710 eV Core-core repulsion = 21662.892362 eV Total energy + Delta-G solvation = -3579.754347 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 320.103 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -41.18287 -38.57930 -36.60839 -35.78953 -35.19205 -32.94774 -32.50041 -31.41184 -30.09154 -28.82654 -26.20716 -25.83968 -24.90931 -22.90227 -21.34275 -21.05296 -20.21309 -19.17001 -17.59064 -16.72240 -16.37252 -15.87194 -15.08972 -14.79414 -14.67378 -14.25635 -14.15156 -13.80644 -13.72904 -13.36260 -13.23605 -12.88313 -12.81465 -12.31191 -12.21300 -11.72624 -11.62862 -11.52159 -11.45780 -11.33615 -11.05929 -10.80064 -10.79006 -10.68855 -10.49240 -10.41275 -10.14177 -9.87814 -9.27005 -9.17606 -8.81044 -7.85103 -7.62651 -7.16995 -6.48438 -4.23585 1.29511 1.87996 2.53134 2.88037 3.04997 3.14599 3.15351 3.25374 3.76377 4.04330 4.14978 4.54488 4.84350 4.92551 5.02911 5.21814 5.31817 5.44613 5.51597 5.63633 5.67799 5.73748 5.75607 5.84553 5.90824 6.02232 6.13334 6.22358 6.37560 6.42269 6.54207 6.65853 6.67985 6.81790 6.86655 6.96052 7.02475 7.24008 7.34693 7.37266 7.53149 7.77492 8.20765 8.91388 9.25653 9.70338 10.53359 Molecular weight = 320.10amu Principal moments of inertia in cm(-1) A = 0.012335 B = 0.005512 C = 0.005177 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2269.390516 B = 5078.895402 C = 5407.665095 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C -0.134 4.134 3 C 0.116 3.884 4 N -0.412 5.412 5 C -0.347 4.347 6 H 0.086 0.914 7 C 0.055 3.945 8 N -0.849 5.849 9 Si 0.913 3.087 10 H -0.270 1.270 11 H -0.281 1.281 12 H -0.271 1.271 13 C 0.521 3.479 14 O -0.582 6.582 15 C 0.126 3.874 16 C -0.092 4.092 17 Cl -0.040 7.040 18 C -0.090 4.090 19 C -0.065 4.065 20 C -0.151 4.151 21 C -0.105 4.105 22 C -0.124 4.124 23 C 0.101 3.899 24 N -0.459 5.459 25 C 0.079 3.921 26 H 0.046 0.954 27 H 0.052 0.948 28 H 0.051 0.949 29 H 0.051 0.949 30 H 0.060 0.940 31 H 0.106 0.894 32 H 0.058 0.942 33 H 0.273 0.727 34 H 0.121 0.879 35 H 0.119 0.881 36 H 0.121 0.879 37 H 0.118 0.882 38 H 0.069 0.931 39 H 0.083 0.917 40 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.263 -6.478 -1.310 9.820 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.173 4.173 3 C -0.007 4.007 4 N -0.129 5.129 5 C -0.475 4.475 6 H 0.104 0.896 7 C -0.154 4.154 8 N -0.484 5.484 9 Si 0.738 3.262 10 H -0.195 1.195 11 H -0.206 1.206 12 H -0.197 1.197 13 C 0.307 3.693 14 O -0.466 6.466 15 C 0.014 3.986 16 C -0.126 4.126 17 Cl -0.012 7.012 18 C -0.096 4.096 19 C -0.084 4.084 20 C -0.170 4.170 21 C -0.125 4.125 22 C -0.144 4.144 23 C -0.007 4.007 24 N -0.142 5.142 25 C -0.062 4.062 26 H 0.065 0.935 27 H 0.072 0.928 28 H 0.070 0.930 29 H 0.069 0.931 30 H 0.078 0.922 31 H 0.124 0.876 32 H 0.077 0.923 33 H 0.083 0.917 34 H 0.139 0.861 35 H 0.137 0.863 36 H 0.139 0.861 37 H 0.136 0.864 38 H 0.088 0.912 39 H 0.102 0.898 40 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 6.566 -6.471 -1.659 9.366 hybrid contribution 0.280 0.116 1.053 1.096 sum 6.845 -6.355 -0.605 9.360 Atomic orbital electron populations 1.21647 0.96229 1.00594 1.01608 1.21843 0.95090 0.99128 1.01213 1.21499 0.80533 0.94712 1.03962 1.43380 1.04937 1.60504 1.04056 1.19252 1.12114 1.25326 0.90825 0.89589 1.25385 0.96396 0.93172 1.00409 1.69880 1.30814 1.13938 1.33765 0.86222 0.79552 0.78368 0.82019 1.19488 1.20600 1.19667 1.17379 0.83713 0.83118 0.85063 1.90721 1.68091 1.56403 1.31383 1.20113 0.93005 0.84980 1.00481 1.19588 0.91358 0.86741 1.14943 1.98301 1.92950 1.16851 1.93081 1.17855 0.92416 0.92725 1.06560 1.20314 0.90177 0.99509 0.98381 1.20497 0.97909 0.94195 1.04416 1.20713 0.96010 0.95070 1.00692 1.19948 0.89829 0.98846 1.05823 1.18192 0.84068 0.94119 1.04331 1.43988 1.03572 1.08503 1.58132 1.22018 1.00837 0.81470 1.01872 0.93502 0.92840 0.92988 0.93060 0.92168 0.87581 0.92344 0.91674 0.86063 0.86315 0.86085 0.86411 0.91214 0.89827 0.88963 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.24 9.91 37.16 0.37 -1.87 16 2 C -0.13 -2.54 6.24 -26.73 -0.17 -2.71 16 3 C 0.12 2.65 4.96 -4.04 -0.02 2.63 16 4 N -0.41 -10.07 2.50 -116.28 -0.29 -10.36 16 5 C -0.35 -8.57 8.60 -15.02 -0.13 -8.70 16 6 H 0.09 2.10 7.23 -52.49 -0.38 1.72 16 7 C 0.05 1.34 5.00 -17.45 -0.09 1.26 16 8 N -0.85 -21.85 11.46 55.50 0.64 -21.22 16 9 Si 0.91 19.23 29.59 -169.99 -5.03 14.20 16 10 H -0.27 -5.77 7.11 56.52 0.40 -5.37 16 11 H -0.28 -5.89 7.11 56.52 0.40 -5.49 16 12 H -0.27 -5.55 7.11 56.52 0.40 -5.15 16 13 C 0.52 12.89 6.60 -12.83 -0.08 12.81 16 14 O -0.58 -15.67 16.72 5.17 0.09 -15.58 16 15 C 0.13 2.85 5.03 -82.25 -0.41 2.44 16 16 C -0.09 -2.03 6.73 -39.02 -0.26 -2.29 16 17 Cl -0.04 -0.86 29.04 -51.86 -1.51 -2.37 16 18 C -0.09 -1.73 6.16 -106.90 -0.66 -2.39 16 19 C -0.07 -1.04 10.06 -39.53 -0.40 -1.44 16 20 C -0.15 -2.02 9.97 -39.97 -0.40 -2.42 16 21 C -0.11 -1.35 10.02 -39.52 -0.40 -1.74 16 22 C -0.12 -1.77 9.90 -39.42 -0.39 -2.16 16 23 C 0.10 1.80 6.81 -83.95 -0.57 1.23 16 24 N -0.46 -8.74 3.12 -117.67 -0.37 -9.11 16 25 C 0.08 1.19 10.84 59.85 0.65 1.84 16 26 H 0.05 0.63 8.14 -51.93 -0.42 0.21 16 27 H 0.05 0.82 8.14 -51.93 -0.42 0.39 16 28 H 0.05 0.80 8.14 -51.93 -0.42 0.38 16 29 H 0.05 0.99 8.14 -51.93 -0.42 0.57 16 30 H 0.06 1.13 8.14 -51.93 -0.42 0.71 16 31 H 0.11 2.56 5.61 -51.93 -0.29 2.26 16 32 H 0.06 1.41 7.46 -51.93 -0.39 1.02 16 33 H 0.27 6.65 8.31 -40.82 -0.34 6.31 16 34 H 0.12 1.77 8.06 -52.48 -0.42 1.34 16 35 H 0.12 1.24 8.06 -52.48 -0.42 0.82 16 36 H 0.12 1.16 8.06 -52.49 -0.42 0.74 16 37 H 0.12 1.37 7.92 -52.49 -0.42 0.95 16 38 H 0.07 0.94 8.14 -51.93 -0.42 0.52 16 39 H 0.08 0.98 7.88 -51.93 -0.41 0.57 16 40 H 0.09 1.51 7.84 -51.93 -0.41 1.10 16 LS Contribution 355.85 15.07 5.36 5.36 Total: -1.00 -29.70 355.85 -9.30 -39.00 By element: Atomic # 1 Polarization: 8.83 SS G_CDS: -5.23 Total: 3.60 kcal Atomic # 6 Polarization: -0.56 SS G_CDS: -2.96 Total: -3.52 kcal Atomic # 7 Polarization: -40.66 SS G_CDS: -0.02 Total: -40.68 kcal Atomic # 8 Polarization: -15.67 SS G_CDS: 0.09 Total: -15.58 kcal Atomic # 14 Polarization: 19.23 SS G_CDS: -5.03 Total: 14.20 kcal Atomic # 17 Polarization: -0.86 SS G_CDS: -1.51 Total: -2.37 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -29.70 -9.30 -39.00 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000060556026.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 58.828 kcal (2) G-P(sol) polarization free energy of solvation -29.703 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.125 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.298 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.000 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.828 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds