Wall clock time and date at job start Tue Mar 31 2020 13:39:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52999 * 109.47289 * 2 1 4 4 N 1.46501 * 109.46862 * 179.97438 * 3 2 1 5 5 C 1.37098 * 120.00311 * 264.74771 * 4 3 2 6 6 H 1.08003 * 120.00136 * 146.16754 * 5 4 3 7 7 C 1.38953 * 119.99713 * 326.16608 * 5 4 3 8 8 N 1.31405 * 120.00487 * 337.68367 * 7 5 4 9 9 Si 1.86801 * 119.99802 * 157.68113 * 7 5 4 10 10 H 1.48510 * 109.46933 * 60.00071 * 9 7 5 11 11 H 1.48496 * 109.47234 * 180.02562 * 9 7 5 12 12 H 1.48501 * 109.47234 * 300.00748 * 9 7 5 13 13 C 1.34774 * 119.99813 * 84.75434 * 4 3 2 14 14 O 1.21294 * 120.00090 * 180.02562 * 13 4 3 15 15 C 1.50699 * 120.00149 * 359.97438 * 13 4 3 16 16 C 1.50698 * 109.47513 * 180.02562 * 15 13 4 17 17 C 1.34220 * 126.50516 * 265.00879 * 16 15 13 18 18 N 1.36865 * 109.93396 * 179.97438 * 17 16 15 19 19 H 0.96995 * 125.06725 * 180.02562 * 18 17 16 20 20 C 1.37696 * 109.86169 * 359.97438 * 18 17 16 21 21 C 1.39123 * 133.48107 * 179.70909 * 20 18 17 22 22 C 1.37852 * 119.76456 * 179.86274 * 21 20 18 23 23 Cl 1.73603 * 119.68232 * 180.22299 * 22 21 20 24 24 C 1.38928 * 120.63572 * 0.43984 * 22 21 20 25 25 C 1.36609 * 120.52174 * 359.80391 * 24 22 21 26 26 C 1.39632 * 119.77958 * 359.97374 * 25 24 22 27 27 H 1.08993 * 109.47370 * 179.97438 * 1 2 3 28 28 H 1.09006 * 109.46988 * 300.00296 * 1 2 3 29 29 H 1.08999 * 109.47166 * 59.99784 * 1 2 3 30 30 H 1.08998 * 109.46929 * 240.00035 * 2 1 3 31 31 H 1.08999 * 109.47166 * 120.00216 * 2 1 3 32 32 H 1.08998 * 109.47106 * 60.00143 * 3 2 1 33 33 H 1.08999 * 109.47193 * 300.00199 * 3 2 1 34 34 H 0.96997 * 120.00406 * 179.97438 * 8 7 5 35 35 H 1.08998 * 109.46801 * 60.00453 * 15 13 4 36 36 H 1.08995 * 109.47344 * 300.00571 * 15 13 4 37 37 H 1.08003 * 125.03302 * 359.97307 * 17 16 15 38 38 H 1.07998 * 120.11486 * 0.29949 * 21 20 18 39 39 H 1.08001 * 119.74010 * 179.78161 * 24 22 21 40 40 H 1.08002 * 120.11671 * 180.02562 * 25 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 3.5050 1.4424 0.0006 5 6 4.1901 1.5512 1.1832 6 1 5.1329 1.0398 1.3101 7 6 3.6715 2.3194 2.2183 8 7 2.8004 3.2686 1.9595 9 14 4.2125 2.0028 3.9780 10 1 5.6806 2.1979 4.0872 11 1 3.5179 2.9493 4.8874 12 1 3.8688 0.6091 4.3584 13 6 4.1794 1.3354 -1.1614 14 8 5.3923 1.3349 -1.1609 15 6 3.4264 1.2154 -2.4613 16 6 4.4061 1.1099 -3.6015 17 6 4.8539 2.1186 -4.3653 18 7 5.7329 1.6417 -5.2997 19 1 6.1880 2.1825 -5.9640 20 6 5.8758 0.2798 -5.1554 21 6 6.6227 -0.6812 -5.8294 22 6 6.5541 -2.0008 -5.4366 23 17 7.4915 -3.1972 -6.2753 24 6 5.7386 -2.3830 -4.3788 25 6 4.9933 -1.4559 -3.7071 26 6 5.0515 -0.1131 -4.0855 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 1.8933 -0.5138 -0.8900 31 1 1.8933 -0.5139 0.8900 32 1 1.6767 1.9563 0.8900 33 1 1.6767 1.9563 -0.8900 34 1 2.4381 3.8047 2.6822 35 1 2.7996 2.0962 -2.6007 36 1 2.7999 0.3238 -2.4373 37 1 4.5637 3.1534 -4.2584 38 1 7.2594 -0.3933 -6.6529 39 1 5.6932 -3.4215 -4.0854 40 1 4.3619 -1.7603 -2.8854 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068110372.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:39:24 Heat of formation + Delta-G solvation = 12.377185 kcal Electronic energy + Delta-G solvation = -24265.057639 eV Core-core repulsion = 20684.980220 eV Total energy + Delta-G solvation = -3580.077419 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 320.103 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -41.14518 -38.46350 -37.34750 -35.88169 -35.20328 -33.01654 -32.40215 -31.14387 -30.00554 -29.06825 -27.06591 -25.65125 -24.14681 -22.89152 -21.71562 -20.98128 -20.00150 -18.52796 -17.58486 -16.79936 -16.38570 -15.94344 -15.73461 -14.81897 -14.50220 -14.35977 -14.17507 -14.00307 -13.73484 -13.68795 -13.01113 -12.86927 -12.67141 -12.45723 -12.34183 -11.85348 -11.59153 -11.45114 -11.38898 -11.21581 -10.95881 -10.91978 -10.87009 -10.69139 -10.55728 -10.34593 -10.17694 -9.88542 -9.41425 -8.88632 -8.31755 -8.05900 -7.45534 -7.40376 -6.28795 -3.88919 1.12000 1.62998 2.12827 2.85722 3.21685 3.27332 3.30562 3.31933 3.91692 4.00242 4.21186 4.79984 4.94455 4.96724 5.10861 5.14673 5.29892 5.39441 5.58958 5.64337 5.66222 5.73927 5.79891 5.86156 5.92895 6.08456 6.13377 6.25237 6.30874 6.37329 6.43329 6.51748 6.59249 6.64538 6.73768 6.93679 6.99001 7.21112 7.33131 7.63874 7.64839 8.30697 8.58261 9.26294 9.48891 10.10568 10.74729 Molecular weight = 320.10amu Principal moments of inertia in cm(-1) A = 0.016612 B = 0.003234 C = 0.003209 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1685.095589 B = 8656.138362 C = 8723.955864 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.141 4.141 3 C 0.101 3.899 4 N -0.445 5.445 5 C -0.304 4.304 6 H 0.090 0.910 7 C 0.035 3.965 8 N -0.871 5.871 9 Si 0.914 3.086 10 H -0.273 1.273 11 H -0.285 1.285 12 H -0.274 1.274 13 C 0.460 3.540 14 O -0.573 6.573 15 C -0.067 4.067 16 C -0.123 4.123 17 C 0.055 3.945 18 N -0.593 5.593 19 H 0.414 0.586 20 C 0.104 3.896 21 C -0.124 4.124 22 C -0.016 4.016 23 Cl -0.081 7.081 24 C -0.145 4.145 25 C -0.046 4.046 26 C -0.083 4.083 27 H 0.046 0.954 28 H 0.053 0.947 29 H 0.049 0.951 30 H 0.049 0.951 31 H 0.063 0.937 32 H 0.113 0.887 33 H 0.046 0.954 34 H 0.267 0.733 35 H 0.087 0.913 36 H 0.085 0.915 37 H 0.171 0.829 38 H 0.126 0.874 39 H 0.130 0.870 40 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.317 -5.819 -13.947 15.169 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.179 4.179 3 C -0.023 4.023 4 N -0.164 5.164 5 C -0.432 4.432 6 H 0.108 0.892 7 C -0.168 4.168 8 N -0.510 5.510 9 Si 0.741 3.259 10 H -0.198 1.198 11 H -0.211 1.211 12 H -0.200 1.200 13 C 0.248 3.752 14 O -0.456 6.456 15 C -0.107 4.107 16 C -0.130 4.130 17 C -0.070 4.070 18 N -0.196 5.196 19 H 0.251 0.749 20 C -0.004 4.004 21 C -0.146 4.146 22 C -0.044 4.044 23 Cl -0.052 7.052 24 C -0.165 4.165 25 C -0.065 4.065 26 C -0.089 4.089 27 H 0.065 0.935 28 H 0.072 0.928 29 H 0.068 0.932 30 H 0.068 0.932 31 H 0.082 0.918 32 H 0.131 0.869 33 H 0.065 0.935 34 H 0.077 0.923 35 H 0.105 0.895 36 H 0.103 0.897 37 H 0.188 0.812 38 H 0.144 0.856 39 H 0.147 0.853 40 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -0.690 -5.655 -13.960 15.078 hybrid contribution 0.458 0.196 0.557 0.747 sum -0.231 -5.459 -13.404 14.475 Atomic orbital electron populations 1.21677 0.96416 1.00632 1.01534 1.21985 0.94824 0.99475 1.01643 1.21657 0.82170 0.94380 1.04087 1.43511 1.04488 1.63566 1.04858 1.19401 1.06693 1.28186 0.88926 0.89228 1.25276 0.97426 0.93784 1.00327 1.69906 1.31194 1.17045 1.32843 0.86195 0.79091 0.78259 0.82372 1.19834 1.21052 1.19954 1.20258 0.88136 0.82296 0.84501 1.90536 1.14053 1.54260 1.86713 1.20064 0.96261 1.03115 0.91295 1.19817 1.03209 0.90926 0.99035 1.21575 0.94503 0.98893 0.92052 1.41591 1.40753 1.05565 1.31726 0.74930 1.17903 1.00014 0.84103 0.98345 1.19628 1.02663 0.90039 1.02258 1.20292 0.98155 0.89014 0.96936 1.98340 1.72332 1.56860 1.77707 1.20407 0.99082 1.00275 0.96730 1.20230 0.97635 0.90669 0.97936 1.19122 0.99347 0.93658 0.96726 0.93512 0.92780 0.93167 0.93196 0.91789 0.86898 0.93517 0.92316 0.89473 0.89674 0.81229 0.85593 0.85255 0.85238 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.04 9.91 37.16 0.37 -1.67 16 2 C -0.14 -2.46 6.17 -26.73 -0.16 -2.62 16 3 C 0.10 2.12 4.72 -4.04 -0.02 2.10 16 4 N -0.44 -10.98 2.56 -114.81 -0.29 -11.28 16 5 C -0.30 -8.36 8.98 -14.93 -0.13 -8.49 16 6 H 0.09 2.61 7.70 -52.48 -0.40 2.21 16 7 C 0.04 0.92 4.92 -17.47 -0.09 0.84 16 8 N -0.87 -23.05 11.33 55.50 0.63 -22.42 16 9 Si 0.91 20.54 29.61 -169.99 -5.03 15.51 16 10 H -0.27 -6.23 7.11 56.52 0.40 -5.83 16 11 H -0.29 -6.27 7.11 56.52 0.40 -5.87 16 12 H -0.27 -6.04 7.11 56.52 0.40 -5.64 16 13 C 0.46 10.98 7.59 -10.99 -0.08 10.90 16 14 O -0.57 -15.96 15.86 5.54 0.09 -15.87 16 15 C -0.07 -1.20 4.84 -29.04 -0.14 -1.34 16 16 C -0.12 -2.12 4.81 -102.71 -0.49 -2.61 16 17 C 0.05 0.80 11.73 -16.72 -0.20 0.60 16 18 N -0.59 -7.60 6.07 -10.65 -0.06 -7.66 16 19 H 0.41 3.72 8.96 -40.82 -0.37 3.35 16 20 C 0.10 1.56 7.28 -83.99 -0.61 0.94 16 21 C -0.12 -1.66 9.84 -39.39 -0.39 -2.04 16 22 C -0.02 -0.22 6.31 -39.47 -0.25 -0.47 16 23 Cl -0.08 -0.95 28.93 -51.86 -1.50 -2.46 16 24 C -0.14 -2.02 9.75 -39.91 -0.39 -2.41 16 25 C -0.05 -0.72 10.05 -39.65 -0.40 -1.12 16 26 C -0.08 -1.41 6.35 -105.13 -0.67 -2.08 16 27 H 0.05 0.58 8.14 -51.93 -0.42 0.16 16 28 H 0.05 0.77 8.14 -51.93 -0.42 0.35 16 29 H 0.05 0.64 8.14 -51.93 -0.42 0.22 16 30 H 0.05 0.82 6.59 -51.93 -0.34 0.48 16 31 H 0.06 1.22 8.14 -51.93 -0.42 0.79 16 32 H 0.11 2.64 5.34 -51.93 -0.28 2.36 16 33 H 0.05 0.88 6.66 -51.93 -0.35 0.54 16 34 H 0.27 6.69 8.31 -40.82 -0.34 6.35 16 35 H 0.09 1.41 7.41 -51.93 -0.38 1.03 16 36 H 0.08 1.39 6.53 -51.93 -0.34 1.05 16 37 H 0.17 2.01 8.06 -52.48 -0.42 1.59 16 38 H 0.13 1.37 8.06 -52.49 -0.42 0.95 16 39 H 0.13 1.53 8.06 -52.49 -0.42 1.11 16 40 H 0.13 1.92 8.06 -52.49 -0.42 1.50 16 LS Contribution 351.23 15.07 5.29 5.29 Total: -1.00 -32.16 351.23 -9.51 -41.67 By element: Atomic # 1 Polarization: 11.66 SS G_CDS: -4.98 Total: 6.69 kcal Atomic # 6 Polarization: -5.82 SS G_CDS: -3.65 Total: -9.47 kcal Atomic # 7 Polarization: -41.63 SS G_CDS: 0.27 Total: -41.36 kcal Atomic # 8 Polarization: -15.96 SS G_CDS: 0.09 Total: -15.87 kcal Atomic # 14 Polarization: 20.54 SS G_CDS: -5.03 Total: 15.51 kcal Atomic # 17 Polarization: -0.95 SS G_CDS: -1.50 Total: -2.46 kcal Total LS contribution 5.29 Total: 5.29 kcal Total: -32.16 -9.51 -41.67 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068110372.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 54.051 kcal (2) G-P(sol) polarization free energy of solvation -32.162 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.889 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.512 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.673 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.377 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds