Wall clock time and date at job start Tue Mar 31 2020 14:04:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09006 * 109.47133 * 2 1 4 4 C 1.50697 * 109.47051 * 239.99841 * 2 1 3 5 5 H 1.08001 * 119.99946 * 239.99727 * 4 2 1 6 6 C 1.37873 * 120.00260 * 60.00172 * 4 2 1 7 7 N 1.31511 * 120.00044 * 359.97438 * 6 4 2 8 8 Si 1.86804 * 120.00135 * 180.02562 * 6 4 2 9 9 H 1.48500 * 109.47072 * 89.99587 * 8 6 4 10 10 H 1.48499 * 109.46945 * 209.99508 * 8 6 4 11 11 H 1.48507 * 109.46897 * 329.99563 * 8 6 4 12 12 N 1.46901 * 109.47263 * 119.99441 * 2 1 3 13 13 C 1.46899 * 111.00173 * 176.04658 * 12 2 1 14 14 C 1.46902 * 111.00041 * 299.99988 * 12 2 1 15 15 C 1.50700 * 109.46873 * 169.99593 * 14 12 2 16 16 N 1.30354 * 125.47864 * 89.98130 * 15 14 12 17 17 C 1.34150 * 108.90291 * 180.02562 * 16 15 14 18 18 C 1.35769 * 107.51369 * 359.97438 * 17 16 15 19 19 C 1.47825 * 126.58005 * 179.97438 * 18 17 16 20 20 C 1.39579 * 120.13491 * 0.02989 * 19 18 17 21 21 C 1.37937 * 119.86690 * 180.02562 * 20 19 18 22 22 C 1.38476 * 120.13514 * 0.02562 * 21 20 19 23 23 Cl 1.73599 * 119.86674 * 179.97438 * 22 21 20 24 24 C 1.38470 * 120.26253 * 0.23270 * 22 21 20 25 25 C 1.37948 * 120.13037 * 359.48831 * 24 22 21 26 26 O 1.34009 * 125.48547 * 270.30345 * 15 14 12 27 27 H 1.09001 * 109.47330 * 60.00177 * 1 2 3 28 28 H 1.08998 * 109.47053 * 180.02562 * 1 2 3 29 29 H 1.09001 * 109.47030 * 300.00095 * 1 2 3 30 30 H 0.96998 * 120.00095 * 180.02562 * 7 6 4 31 31 H 1.08994 * 109.47264 * 183.95817 * 13 12 2 32 32 H 1.08997 * 109.47151 * 303.95527 * 13 12 2 33 33 H 1.09000 * 109.47103 * 63.95041 * 13 12 2 34 34 H 1.08998 * 109.46821 * 49.99937 * 14 12 2 35 35 H 1.08999 * 109.47002 * 289.99712 * 14 12 2 36 36 H 1.07997 * 126.24152 * 179.97438 * 17 16 15 37 37 H 1.07997 * 120.06176 * 359.97438 * 20 19 18 38 38 H 1.08004 * 119.93251 * 179.97438 * 21 20 19 39 39 H 1.07991 * 119.93435 * 179.74298 * 24 22 21 40 40 H 1.07996 * 120.06329 * 180.27445 * 25 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0323 -0.7104 -1.2304 5 1 2.6532 -1.5885 -1.1313 6 6 1.6993 -0.2394 -2.4827 7 7 0.9428 0.8295 -2.6034 8 14 2.3213 -1.1205 -4.0079 9 1 1.3427 -2.1619 -4.4117 10 1 2.4865 -0.1416 -5.1123 11 1 3.6294 -1.7585 -3.7121 12 7 2.0197 -0.6924 1.1995 13 6 3.4851 -0.7944 1.1871 14 6 1.5487 -0.0261 2.4211 15 6 1.8580 -0.8909 3.6159 16 7 2.9554 -0.8469 4.3179 17 6 2.8798 -1.7574 5.3002 18 6 1.6794 -2.3814 5.1873 19 6 1.1617 -3.4594 6.0564 20 6 1.9315 -3.9323 7.1203 21 6 1.4433 -4.9388 7.9274 22 6 0.1924 -5.4803 7.6836 23 17 -0.4150 -6.7471 8.7033 24 6 -0.5738 -5.0189 6.6264 25 6 -0.0986 -4.0089 5.8158 26 8 1.0516 -1.8329 4.1240 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3633 0.5139 0.8900 30 1 0.7082 1.1607 -3.4845 31 1 3.8164 -1.3720 2.0500 32 1 3.8070 -1.2914 0.2720 33 1 3.9192 0.2045 1.2300 34 1 0.4723 0.1326 2.3564 35 1 2.0519 0.9348 2.5280 36 1 3.6360 -1.9575 6.0449 37 1 2.9078 -3.5116 7.3106 38 1 2.0383 -5.3058 8.7507 39 1 -1.5469 -5.4479 6.4385 40 1 -0.6989 -3.6469 4.9943 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000129634259.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:04:06 Heat of formation + Delta-G solvation = 52.032832 kcal Electronic energy + Delta-G solvation = -23442.892253 eV Core-core repulsion = 19864.534432 eV Total energy + Delta-G solvation = -3578.357821 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 320.103 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -43.19219 -39.51832 -37.21167 -36.82513 -34.67795 -33.16656 -32.39912 -31.50646 -29.85406 -28.90628 -27.00319 -24.86841 -23.91712 -23.66282 -22.69100 -21.59443 -20.87075 -19.57660 -18.05730 -16.81280 -16.58421 -16.37087 -16.02465 -15.62949 -15.10138 -14.45121 -14.20858 -14.01744 -14.01046 -13.83369 -13.76899 -13.38437 -12.65739 -12.38042 -12.24162 -12.02688 -11.94481 -11.89237 -11.28194 -11.22616 -11.18507 -11.03822 -10.78881 -10.68172 -10.46934 -10.25194 -10.10514 -9.98491 -9.76755 -9.48433 -8.99272 -8.49088 -8.10626 -7.39439 -6.07409 -4.12056 0.28832 0.89461 1.74542 1.76984 2.60867 2.74551 3.28461 3.34979 3.36668 3.38297 4.10163 4.32572 4.37621 4.46179 4.55112 4.84711 4.86920 4.97172 5.07334 5.21414 5.25871 5.48183 5.53881 5.61965 5.78180 5.82049 5.84858 5.96842 6.18227 6.19973 6.30972 6.31824 6.38546 6.72858 6.77582 6.94842 7.02356 7.38250 7.55474 7.75484 7.83313 8.05741 8.20209 8.44202 8.93041 9.53008 10.99492 Molecular weight = 320.10amu Principal moments of inertia in cm(-1) A = 0.021511 B = 0.002373 C = 0.002270 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1301.345842 B =11796.714865 C =12329.596843 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.137 4.137 2 C 0.214 3.786 3 H 0.005 0.995 4 C -0.505 4.505 5 H 0.065 0.935 6 C 0.060 3.940 7 N -0.892 5.892 8 Si 0.899 3.101 9 H -0.280 1.280 10 H -0.287 1.287 11 H -0.274 1.274 12 N -0.533 5.533 13 C 0.035 3.965 14 C 0.134 3.866 15 C 0.242 3.758 16 N -0.488 5.488 17 C -0.008 4.008 18 C -0.034 4.034 19 C 0.007 3.993 20 C -0.090 4.090 21 C -0.104 4.104 22 C -0.035 4.035 23 Cl -0.070 7.070 24 C -0.104 4.104 25 C -0.090 4.090 26 O -0.185 6.185 27 H 0.089 0.911 28 H 0.037 0.963 29 H 0.009 0.991 30 H 0.261 0.739 31 H 0.047 0.953 32 H 0.080 0.920 33 H 0.018 0.982 34 H 0.105 0.895 35 H 0.072 0.928 36 H 0.183 0.817 37 H 0.139 0.861 38 H 0.140 0.860 39 H 0.139 0.861 40 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.056 -9.225 21.279 23.217 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.195 4.195 2 C 0.109 3.891 3 H 0.023 0.977 4 C -0.543 4.543 5 H 0.083 0.917 6 C -0.141 4.141 7 N -0.531 5.531 8 Si 0.727 3.273 9 H -0.206 1.206 10 H -0.213 1.213 11 H -0.199 1.199 12 N -0.259 5.259 13 C -0.113 4.113 14 C 0.005 3.995 15 C 0.036 3.964 16 N -0.217 5.217 17 C -0.149 4.149 18 C -0.088 4.088 19 C 0.006 3.994 20 C -0.108 4.108 21 C -0.123 4.123 22 C -0.062 4.062 23 Cl -0.041 7.041 24 C -0.122 4.122 25 C -0.109 4.109 26 O -0.072 6.072 27 H 0.107 0.893 28 H 0.056 0.944 29 H 0.028 0.972 30 H 0.071 0.929 31 H 0.066 0.934 32 H 0.098 0.902 33 H 0.036 0.964 34 H 0.123 0.877 35 H 0.090 0.910 36 H 0.200 0.800 37 H 0.157 0.843 38 H 0.157 0.843 39 H 0.156 0.844 40 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -0.942 -9.272 21.035 23.007 hybrid contribution 0.059 -0.269 -0.575 0.638 sum -0.883 -9.541 20.460 22.592 Atomic orbital electron populations 1.21915 0.97506 0.99973 1.00125 1.19318 0.92452 0.92268 0.85086 0.97745 1.21095 1.31302 1.12421 0.89484 0.91730 1.24917 0.95142 0.95049 0.99040 1.69876 1.36746 1.22924 1.23586 0.86486 0.79251 0.79280 0.82329 1.20628 1.21282 1.19899 1.62185 1.10514 1.52335 1.00907 1.22287 0.87617 0.99524 1.01906 1.20657 1.03129 0.91453 0.84304 1.26727 0.84142 0.89024 0.96534 1.70462 1.22235 1.22398 1.06574 1.23313 0.96680 0.95415 0.99470 1.21179 0.94636 1.00788 0.92149 1.17700 0.94558 0.93367 0.93787 1.20985 0.99913 0.96398 0.93544 1.20919 0.94302 0.96660 1.00423 1.21053 0.95682 0.94261 0.95195 1.98378 1.87724 1.50592 1.67446 1.21010 1.00389 0.97012 0.93830 1.21315 0.94904 0.95338 0.99313 1.84481 1.44631 1.42188 1.35868 0.89257 0.94399 0.97207 0.92864 0.93409 0.90155 0.96359 0.87688 0.90989 0.79993 0.84325 0.84265 0.84354 0.84170 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -3.19 8.76 37.16 0.33 -2.86 16 2 C 0.21 5.20 2.06 -68.87 -0.14 5.05 16 3 H 0.00 0.13 8.14 -51.93 -0.42 -0.29 16 4 C -0.50 -13.43 7.88 -34.44 -0.27 -13.71 16 5 H 0.06 1.73 6.41 -52.49 -0.34 1.39 16 6 C 0.06 1.61 5.30 -17.82 -0.09 1.52 16 7 N -0.89 -24.69 11.32 55.43 0.63 -24.06 16 8 Si 0.90 20.95 29.54 -169.99 -5.02 15.93 16 9 H -0.28 -6.52 7.11 56.52 0.40 -6.12 16 10 H -0.29 -6.66 7.11 56.52 0.40 -6.25 16 11 H -0.27 -6.33 7.11 56.52 0.40 -5.93 16 12 N -0.53 -11.34 4.61 -237.73 -1.10 -12.43 16 13 C 0.03 0.71 9.08 60.06 0.55 1.26 16 14 C 0.13 2.40 5.41 -4.97 -0.03 2.38 16 15 C 0.24 4.15 6.97 -12.91 -0.09 4.06 16 16 N -0.49 -8.08 10.52 -10.82 -0.11 -8.20 16 17 C -0.01 -0.11 11.29 -17.42 -0.20 -0.31 16 18 C -0.03 -0.47 7.07 -36.55 -0.26 -0.73 16 19 C 0.01 0.07 5.87 -104.98 -0.62 -0.54 16 20 C -0.09 -0.78 9.57 -39.19 -0.38 -1.15 16 21 C -0.10 -0.83 9.81 -39.60 -0.39 -1.22 16 22 C -0.04 -0.31 6.32 -39.41 -0.25 -0.56 16 23 Cl -0.07 -0.58 28.95 -51.86 -1.50 -2.08 16 24 C -0.10 -0.94 9.81 -39.60 -0.39 -1.33 16 25 C -0.09 -0.95 9.73 -39.19 -0.38 -1.33 16 26 O -0.19 -3.04 10.59 4.21 0.04 -3.00 16 27 H 0.09 2.28 6.07 -51.93 -0.32 1.97 16 28 H 0.04 0.88 8.14 -51.93 -0.42 0.45 16 29 H 0.01 0.19 6.20 -51.93 -0.32 -0.14 16 30 H 0.26 6.92 8.31 -40.82 -0.34 6.58 16 31 H 0.05 0.91 6.71 -51.93 -0.35 0.57 16 32 H 0.08 1.72 6.10 -51.93 -0.32 1.40 16 33 H 0.02 0.36 8.14 -51.93 -0.42 -0.06 16 34 H 0.11 1.80 5.83 -51.93 -0.30 1.49 16 35 H 0.07 1.25 8.12 -51.93 -0.42 0.83 16 36 H 0.18 1.75 7.30 -52.49 -0.38 1.37 16 37 H 0.14 0.88 7.04 -52.49 -0.37 0.51 16 38 H 0.14 0.80 8.06 -52.48 -0.42 0.38 16 39 H 0.14 1.01 8.06 -52.49 -0.42 0.59 16 40 H 0.14 1.47 7.94 -52.49 -0.42 1.05 16 LS Contribution 348.37 15.07 5.25 5.25 Total: -1.00 -29.07 348.37 -9.20 -38.27 By element: Atomic # 1 Polarization: 4.57 SS G_CDS: -4.78 Total: -0.21 kcal Atomic # 6 Polarization: -6.86 SS G_CDS: -2.61 Total: -9.47 kcal Atomic # 7 Polarization: -44.11 SS G_CDS: -0.58 Total: -44.69 kcal Atomic # 8 Polarization: -3.04 SS G_CDS: 0.04 Total: -3.00 kcal Atomic # 14 Polarization: 20.95 SS G_CDS: -5.02 Total: 15.93 kcal Atomic # 17 Polarization: -0.58 SS G_CDS: -1.50 Total: -2.08 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -29.07 -9.20 -38.27 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000129634259.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 90.299 kcal (2) G-P(sol) polarization free energy of solvation -29.066 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 61.233 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.200 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.266 kcal (6) G-S(sol) free energy of system = (1) + (5) 52.033 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds