Wall clock time and date at job start Tue Mar 31 2020 13:56:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17395 * 1 3 3 C 1.47195 * 179.97438 * 2 1 4 4 N 1.46506 * 109.47233 * 260.79598 * 3 2 1 5 5 C 1.36939 * 119.99675 * 263.91985 * 4 3 2 6 6 H 1.08000 * 119.99398 * 199.38603 * 5 4 3 7 7 C 1.38811 * 120.00432 * 19.38560 * 5 4 3 8 8 N 1.31616 * 119.99638 * 22.27978 * 7 5 4 9 9 Si 1.86797 * 120.00166 * 202.28500 * 7 5 4 10 10 H 1.48502 * 109.47253 * 59.99901 * 9 7 5 11 11 H 1.48497 * 109.47121 * 179.97438 * 9 7 5 12 12 H 1.48504 * 109.47102 * 299.99934 * 9 7 5 13 13 C 1.46494 * 120.00082 * 83.91675 * 4 3 2 14 14 C 1.50696 * 109.47188 * 90.00196 * 13 4 3 15 15 O 1.21276 * 120.00412 * 0.02562 * 14 13 4 16 16 N 1.34779 * 119.99934 * 179.72766 * 14 13 4 17 17 C 1.46494 * 120.00057 * 180.02562 * 16 14 13 18 18 H 1.08997 * 109.47105 * 324.99425 * 17 16 14 19 19 C 1.53009 * 109.47451 * 84.99705 * 17 16 14 20 20 C 1.50703 * 109.47218 * 204.99421 * 17 16 14 21 21 C 1.38242 * 119.98660 * 319.72949 * 20 17 16 22 22 C 1.38214 * 120.00936 * 179.72275 * 21 20 17 23 23 C 1.38352 * 119.98735 * 0.54490 * 22 21 20 24 24 Cl 1.73605 * 120.01258 * 179.70040 * 23 22 21 25 25 C 1.38354 * 119.97360 * 359.72967 * 23 22 21 26 26 C 1.38213 * 119.98489 * 359.97438 * 25 23 22 27 27 H 4.40647 * 5.51392 * 179.97438 * 4 1 2 28 28 H 1.09005 * 109.47465 * 140.79542 * 3 2 1 29 29 H 1.09003 * 109.47514 * 20.79557 * 3 2 1 30 30 H 0.97005 * 119.99704 * 180.02562 * 8 7 5 31 31 H 1.09008 * 109.46966 * 329.99798 * 13 4 3 32 32 H 1.09002 * 109.46927 * 210.00233 * 13 4 3 33 33 H 0.96997 * 119.99868 * 359.97438 * 16 14 13 34 34 H 1.08994 * 109.46719 * 59.99922 * 19 17 16 35 35 H 1.08999 * 109.46899 * 180.02562 * 19 17 16 36 36 H 1.09004 * 109.46762 * 300.00511 * 19 17 16 37 37 H 1.07998 * 119.99251 * 359.97438 * 21 20 17 38 38 H 1.07998 * 120.00434 * 180.26461 * 22 21 20 39 39 H 1.08006 * 120.00445 * 179.97438 * 25 23 22 40 40 H 1.08006 * 119.98920 * 180.02562 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6459 0.0007 0.0000 4 7 3.1342 0.2218 1.3635 5 6 3.4803 1.4826 1.7707 6 1 4.1186 1.6157 2.6316 7 6 3.0107 2.5895 1.0770 8 7 1.9263 2.4912 0.3376 9 14 3.9179 4.2183 1.1928 10 1 5.3073 4.0473 0.6973 11 1 3.2191 5.2339 0.3650 12 1 3.9487 4.6682 2.6077 13 6 3.2521 -0.9058 2.2912 14 6 4.6246 -1.5158 2.1686 15 8 5.4257 -1.0538 1.3839 16 7 4.9641 -2.5710 2.9352 17 6 6.2985 -3.1636 2.8164 18 1 6.6275 -3.1129 1.7785 19 6 7.2800 -2.3919 3.7009 20 6 6.2498 -4.6037 3.2581 21 6 5.4952 -4.9635 4.3592 22 6 5.4456 -6.2850 4.7612 23 6 6.1603 -7.2459 4.0683 24 17 6.1046 -8.9046 4.5775 25 6 6.9197 -6.8842 2.9699 26 6 6.9637 -5.5634 2.5651 27 1 -1.0501 0.0002 -0.0002 28 1 3.0090 0.7972 -0.6496 29 1 3.0098 -0.9599 -0.3649 30 1 1.5983 3.2646 -0.1474 31 1 2.4984 -1.6553 2.0497 32 1 3.1007 -0.5540 3.3117 33 1 4.3250 -2.9375 3.5662 34 1 6.9509 -2.4427 4.7388 35 1 8.2729 -2.8327 3.6121 36 1 7.3152 -1.3503 3.3815 37 1 4.9412 -4.2126 4.9028 38 1 4.8528 -6.5666 5.6188 39 1 7.4781 -7.6339 2.4289 40 1 7.5562 -5.2810 1.7074 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000281253392.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:56:58 Heat of formation + Delta-G solvation = 66.779545 kcal Electronic energy + Delta-G solvation = -23585.833612 eV Core-core repulsion = 20008.115257 eV Total energy + Delta-G solvation = -3577.718356 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 320.103 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -40.13992 -38.81466 -36.90494 -35.88336 -34.91117 -31.83297 -31.55165 -31.37326 -30.95992 -29.22209 -27.11248 -25.88006 -24.03623 -23.29016 -22.15138 -20.78879 -19.78873 -17.74568 -17.47388 -16.69265 -16.32467 -16.06491 -15.48189 -15.07087 -14.72198 -14.56875 -14.01700 -13.83959 -13.81290 -13.61030 -13.44648 -13.16747 -12.90509 -12.51181 -12.36758 -12.02429 -11.80892 -11.53303 -11.45780 -11.24561 -11.16297 -11.03046 -10.90335 -10.68220 -10.26923 -10.00592 -9.39060 -9.34955 -8.96049 -8.94764 -8.72319 -8.70000 -8.41253 -7.00346 -5.78122 -3.19869 0.79015 0.96140 1.81538 3.23262 3.36598 3.40233 3.47320 3.50966 3.58988 4.18067 4.38360 4.40424 4.44745 4.55416 4.56378 4.97866 5.04242 5.18565 5.29524 5.35009 5.39429 5.55527 5.58714 5.60643 5.72373 5.83598 5.87218 5.89524 5.95322 6.10175 6.19505 6.25596 6.27747 6.45660 6.72885 6.81819 7.23613 7.41214 7.75518 7.92165 8.27076 8.90379 9.09069 9.18699 9.74922 10.19722 11.25514 Molecular weight = 320.10amu Principal moments of inertia in cm(-1) A = 0.021896 B = 0.002608 C = 0.002431 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1278.443369 B =10734.388444 C =11516.507552 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.297 4.297 2 C -0.097 4.097 3 C 0.271 3.729 4 N -0.560 5.560 5 C -0.261 4.261 6 H 0.071 0.929 7 C 0.007 3.993 8 N -0.886 5.886 9 Si 0.901 3.099 10 H -0.283 1.283 11 H -0.291 1.291 12 H -0.284 1.284 13 C 0.133 3.867 14 C 0.481 3.519 15 O -0.519 6.519 16 N -0.741 5.741 17 C 0.181 3.819 18 H 0.095 0.905 19 C -0.157 4.157 20 C -0.077 4.077 21 C -0.101 4.101 22 C -0.106 4.106 23 C -0.039 4.039 24 Cl -0.075 7.075 25 C -0.107 4.107 26 C -0.097 4.097 27 H 0.191 0.809 28 H 0.094 0.906 29 H 0.037 0.963 30 H 0.255 0.745 31 H 0.069 0.931 32 H 0.081 0.919 33 H 0.393 0.607 34 H 0.056 0.944 35 H 0.061 0.939 36 H 0.070 0.930 37 H 0.133 0.867 38 H 0.134 0.866 39 H 0.133 0.867 40 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.628 -19.750 8.198 22.703 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.317 4.317 2 C -0.099 4.099 3 C 0.146 3.854 4 N -0.277 5.277 5 C -0.390 4.390 6 H 0.089 0.911 7 C -0.192 4.192 8 N -0.528 5.528 9 Si 0.730 3.270 10 H -0.209 1.209 11 H -0.217 1.217 12 H -0.210 1.210 13 C 0.000 4.000 14 C 0.265 3.735 15 O -0.392 6.392 16 N -0.398 5.398 17 C 0.075 3.925 18 H 0.113 0.887 19 C -0.215 4.215 20 C -0.078 4.078 21 C -0.120 4.120 22 C -0.125 4.125 23 C -0.066 4.066 24 Cl -0.047 7.047 25 C -0.126 4.126 26 C -0.116 4.116 27 H 0.208 0.792 28 H 0.112 0.888 29 H 0.055 0.945 30 H 0.066 0.934 31 H 0.087 0.913 32 H 0.099 0.901 33 H 0.227 0.773 34 H 0.075 0.925 35 H 0.080 0.920 36 H 0.089 0.911 37 H 0.151 0.849 38 H 0.152 0.848 39 H 0.151 0.849 40 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 8.127 -19.326 7.524 22.275 hybrid contribution -0.106 0.590 0.490 0.774 sum 8.021 -18.737 8.014 21.900 Atomic orbital electron populations 1.24169 0.95289 1.08237 1.03956 1.24234 0.95218 0.93748 0.96748 1.17667 0.82629 0.98178 0.86942 1.43545 1.73559 1.02869 1.07774 1.19031 1.24438 0.81660 1.13869 0.91119 1.24879 0.96072 0.97784 1.00475 1.70128 1.19210 1.29856 1.33619 0.86403 0.79833 0.83266 0.77492 1.20927 1.21720 1.20991 1.20664 0.90878 0.91818 0.96598 1.23261 0.92539 0.78445 0.79210 1.90639 1.52209 1.59909 1.36466 1.46524 1.14513 1.34728 1.44035 1.19696 0.84938 0.86994 1.00853 0.88749 1.22161 0.98353 1.01485 0.99523 1.20204 0.96684 0.95659 0.95236 1.20949 0.99014 0.95539 0.96478 1.21041 0.99196 0.92145 1.00115 1.20951 1.01850 0.85603 0.98148 1.98372 1.97651 1.18008 1.90623 1.21045 0.98943 0.96854 0.95750 1.21026 0.99145 0.91647 0.99781 0.79197 0.88802 0.94484 0.93438 0.91303 0.90149 0.77265 0.92475 0.92037 0.91133 0.84896 0.84823 0.84862 0.84752 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.30 -6.70 19.25 29.55 0.57 -6.13 16 2 C -0.10 -2.35 11.50 -37.13 -0.43 -2.77 16 3 C 0.27 6.60 5.41 -6.83 -0.04 6.57 16 4 N -0.56 -13.74 1.98 -177.95 -0.35 -14.09 16 5 C -0.26 -7.09 9.63 -15.06 -0.14 -7.24 16 6 H 0.07 1.91 7.92 -52.49 -0.42 1.49 16 7 C 0.01 0.20 4.82 -17.43 -0.08 0.12 16 8 N -0.89 -25.25 9.61 55.49 0.53 -24.72 16 9 Si 0.90 21.94 29.61 -169.99 -5.03 16.91 16 10 H -0.28 -6.97 7.11 56.52 0.40 -6.57 16 11 H -0.29 -7.13 7.11 56.52 0.40 -6.73 16 12 H -0.28 -6.81 7.11 56.52 0.40 -6.40 16 13 C 0.13 2.55 6.15 -5.20 -0.03 2.52 16 14 C 0.48 8.69 7.86 -10.99 -0.09 8.60 16 15 O -0.52 -11.64 16.09 5.56 0.09 -11.55 16 16 N -0.74 -9.68 5.03 -54.93 -0.28 -9.96 16 17 C 0.18 2.13 2.77 -69.08 -0.19 1.94 16 18 H 0.09 1.28 7.44 -51.93 -0.39 0.90 16 19 C -0.16 -1.79 9.46 37.16 0.35 -1.43 16 20 C -0.08 -0.75 4.95 -104.62 -0.52 -1.27 16 21 C -0.10 -0.87 9.05 -39.59 -0.36 -1.23 16 22 C -0.11 -0.89 9.83 -39.55 -0.39 -1.28 16 23 C -0.04 -0.35 6.32 -39.50 -0.25 -0.59 16 24 Cl -0.08 -0.64 28.96 -51.86 -1.50 -2.14 16 25 C -0.11 -0.91 9.83 -39.55 -0.39 -1.30 16 26 C -0.10 -0.87 9.67 -39.59 -0.38 -1.25 16 27 H 0.19 3.56 7.80 -54.09 -0.42 3.14 16 28 H 0.09 2.53 6.59 -51.93 -0.34 2.18 16 29 H 0.04 0.82 8.12 -51.93 -0.42 0.40 16 30 H 0.26 7.17 8.31 -40.82 -0.34 6.83 16 31 H 0.07 1.19 8.07 -51.92 -0.42 0.77 16 32 H 0.08 1.45 8.04 -51.93 -0.42 1.03 16 33 H 0.39 4.03 6.88 -40.82 -0.28 3.75 16 34 H 0.06 0.59 8.14 -51.93 -0.42 0.16 16 35 H 0.06 0.60 8.14 -51.93 -0.42 0.18 16 36 H 0.07 0.99 8.14 -51.93 -0.42 0.57 16 37 H 0.13 0.94 6.93 -52.49 -0.36 0.58 16 38 H 0.13 0.90 8.06 -52.49 -0.42 0.47 16 39 H 0.13 0.91 8.06 -52.48 -0.42 0.49 16 40 H 0.13 1.02 8.04 -52.48 -0.42 0.60 16 LS Contribution 363.79 15.07 5.48 5.48 Total: -1.00 -32.38 363.79 -8.57 -40.95 By element: Atomic # 1 Polarization: 8.99 SS G_CDS: -5.14 Total: 3.85 kcal Atomic # 6 Polarization: -2.37 SS G_CDS: -2.37 Total: -4.74 kcal Atomic # 7 Polarization: -48.67 SS G_CDS: -0.09 Total: -48.76 kcal Atomic # 8 Polarization: -11.64 SS G_CDS: 0.09 Total: -11.55 kcal Atomic # 14 Polarization: 21.94 SS G_CDS: -5.03 Total: 16.91 kcal Atomic # 17 Polarization: -0.64 SS G_CDS: -1.50 Total: -2.14 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -32.38 -8.57 -40.95 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000281253392.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 107.728 kcal (2) G-P(sol) polarization free energy of solvation -32.383 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 75.346 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.566 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.949 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.780 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds