Wall clock time and date at job start Tue Mar 31 2020 12:06:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17408 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 N 1.46499 * 109.47086 * 216.59977 * 3 2 1 5 5 C 1.36935 * 120.00185 * 263.22932 * 4 3 2 6 6 H 1.08006 * 119.99616 * 202.15589 * 5 4 3 7 7 C 1.38809 * 120.00183 * 22.15888 * 5 4 3 8 8 N 1.31621 * 120.00216 * 7.95233 * 7 5 4 9 9 Si 1.86800 * 119.99918 * 187.95278 * 7 5 4 10 10 H 1.48502 * 109.47209 * 60.00242 * 9 7 5 11 11 H 1.48504 * 109.46986 * 179.97438 * 9 7 5 12 12 H 1.48501 * 109.47307 * 299.99777 * 9 7 5 13 13 C 1.46503 * 119.99554 * 83.22540 * 4 3 2 14 14 C 1.50700 * 109.47223 * 90.00468 * 13 4 3 15 15 O 1.21288 * 119.99734 * 359.97438 * 14 13 4 16 16 N 1.34776 * 120.00292 * 179.72765 * 14 13 4 17 17 C 1.39973 * 120.00181 * 176.62724 * 16 14 13 18 18 C 1.38853 * 120.07434 * 137.95114 * 17 16 14 19 19 C 1.50692 * 120.02903 * 359.97438 * 18 17 16 20 20 C 1.38123 * 119.93943 * 179.97438 * 18 17 16 21 21 C 1.38294 * 120.09343 * 0.02562 * 20 18 17 22 22 C 1.50700 * 119.92544 * 179.97438 * 21 20 18 23 23 C 1.38261 * 120.15075 * 0.02562 * 21 20 18 24 24 C 1.38228 * 120.05574 * 359.73930 * 23 21 20 25 25 Cl 1.73606 * 120.04760 * 180.25533 * 24 23 21 26 26 H 4.40644 * 5.51394 * 179.97438 * 4 1 2 27 27 H 1.09005 * 109.46917 * 96.60456 * 3 2 1 28 28 H 1.09000 * 109.47322 * 336.60351 * 3 2 1 29 29 H 0.96990 * 120.00281 * 180.02562 * 8 7 5 30 30 H 1.09001 * 109.47609 * 330.00205 * 13 4 3 31 31 H 1.09004 * 109.47213 * 210.00163 * 13 4 3 32 32 H 0.97006 * 119.99544 * 356.62282 * 16 14 13 33 33 H 1.09005 * 109.46898 * 90.00317 * 19 18 17 34 34 H 1.09008 * 109.47201 * 209.99501 * 19 18 17 35 35 H 1.09000 * 109.47635 * 330.00007 * 19 18 17 36 36 H 1.07998 * 119.94937 * 180.02562 * 20 18 17 37 37 H 1.08996 * 109.47466 * 90.00008 * 22 21 20 38 38 H 1.09003 * 109.47122 * 210.00431 * 22 21 20 39 39 H 1.09004 * 109.47098 * 329.99570 * 22 21 20 40 40 H 1.07994 * 119.97274 * 180.02562 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1741 0.0000 0.0000 3 6 2.6461 0.0007 0.0000 4 7 3.1339 1.1097 0.8235 5 6 3.4934 2.2929 0.2352 6 1 4.1673 2.9662 0.7442 7 6 2.9918 2.6269 -1.0152 8 7 2.0532 1.8871 -1.5669 9 14 3.6487 4.1262 -1.9151 10 1 5.1071 3.9661 -2.1447 11 1 2.9547 4.2634 -3.2208 12 1 3.4070 5.3408 -1.0955 13 6 3.2370 0.9530 2.2765 14 6 4.6028 0.4225 2.6289 15 8 5.4104 0.1970 1.7525 16 7 4.9286 0.2032 3.9181 17 6 6.1707 -0.3556 4.2409 18 6 6.9001 0.1417 5.3126 19 6 6.3556 1.2848 6.1298 20 6 8.1252 -0.4122 5.6289 21 6 8.6264 -1.4608 4.8795 22 6 9.9637 -2.0619 5.2276 23 6 7.9038 -1.9583 3.8109 24 6 6.6748 -1.4119 3.4918 25 17 5.7646 -2.0411 2.1541 26 1 -1.0501 -0.0001 -0.0003 27 1 3.0093 0.1190 -1.0209 28 1 3.0099 -0.9423 0.4081 29 1 1.7030 2.1203 -2.4408 30 1 2.4754 0.2536 2.6215 31 1 3.0874 1.9195 2.7577 32 1 4.3023 0.4328 4.6224 33 1 5.7600 0.8911 6.9535 34 1 7.1825 1.8730 6.5281 35 1 5.7306 1.9170 5.4992 36 1 8.6925 -0.0257 6.4627 37 1 9.8222 -2.8764 5.9381 38 1 10.4358 -2.4464 4.3235 39 1 10.6007 -1.2977 5.6731 40 1 8.2977 -2.7776 3.2279 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000281502042.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:06:43 Heat of formation + Delta-G solvation = 83.486419 kcal Electronic energy + Delta-G solvation = -24420.110538 eV Core-core repulsion = 20843.116646 eV Total energy + Delta-G solvation = -3576.993891 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 320.103 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -40.32615 -38.47952 -36.11243 -35.79397 -34.75124 -32.61126 -31.53170 -31.47313 -30.92080 -27.70164 -27.33530 -26.09918 -25.59795 -22.73860 -21.90645 -20.67330 -19.84673 -17.65920 -17.44951 -16.73323 -16.21141 -15.78052 -15.43090 -14.98904 -14.40673 -14.29073 -14.10621 -13.54444 -13.46423 -13.40347 -13.27503 -13.20102 -12.76717 -12.48209 -12.45538 -12.26879 -11.64952 -11.43861 -11.39295 -11.26134 -10.94846 -10.79456 -10.73681 -10.47610 -10.25956 -10.03394 -9.65975 -9.07264 -8.91041 -8.80755 -8.46403 -8.32329 -7.90636 -6.96512 -5.75014 -3.25260 1.20780 1.22747 2.51166 3.29155 3.37366 3.44867 3.45503 3.48598 3.68067 4.18686 4.40524 4.54785 4.63616 4.69964 5.08696 5.12277 5.16695 5.28198 5.38384 5.42622 5.48261 5.50052 5.59422 5.68223 5.73140 5.80825 5.89338 6.01260 6.09488 6.10306 6.23523 6.29339 6.45710 6.61982 6.79167 7.03569 7.37697 7.49514 7.73929 7.80253 8.30547 8.85758 9.12288 9.20012 9.74047 10.19143 11.27777 Molecular weight = 320.10amu Principal moments of inertia in cm(-1) A = 0.017042 B = 0.003837 C = 0.003641 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1642.642666 B = 7296.146761 C = 7687.581600 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.309 4.309 2 C -0.088 4.088 3 C 0.271 3.729 4 N -0.559 5.559 5 C -0.255 4.255 6 H 0.071 0.929 7 C 0.006 3.994 8 N -0.899 5.899 9 Si 0.911 3.089 10 H -0.283 1.283 11 H -0.290 1.290 12 H -0.284 1.284 13 C 0.138 3.862 14 C 0.461 3.539 15 O -0.476 6.476 16 N -0.686 5.686 17 C 0.163 3.837 18 C -0.102 4.102 19 C -0.112 4.112 20 C -0.104 4.104 21 C -0.097 4.097 22 C -0.108 4.108 23 C -0.103 4.103 24 C -0.035 4.035 25 Cl -0.032 7.032 26 H 0.190 0.810 27 H 0.108 0.892 28 H 0.029 0.971 29 H 0.256 0.744 30 H 0.070 0.930 31 H 0.080 0.920 32 H 0.405 0.595 33 H 0.070 0.930 34 H 0.069 0.931 35 H 0.070 0.930 36 H 0.126 0.874 37 H 0.068 0.932 38 H 0.066 0.934 39 H 0.066 0.934 40 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.405 -6.993 16.893 20.560 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.328 4.328 2 C -0.091 4.091 3 C 0.146 3.854 4 N -0.276 5.276 5 C -0.384 4.384 6 H 0.088 0.912 7 C -0.193 4.193 8 N -0.542 5.542 9 Si 0.740 3.260 10 H -0.209 1.209 11 H -0.216 1.216 12 H -0.210 1.210 13 C 0.006 3.994 14 C 0.245 3.755 15 O -0.345 6.345 16 N -0.335 5.335 17 C 0.066 3.934 18 C -0.104 4.104 19 C -0.169 4.169 20 C -0.123 4.123 21 C -0.098 4.098 22 C -0.165 4.165 23 C -0.123 4.123 24 C -0.065 4.065 25 Cl -0.002 7.002 26 H 0.208 0.792 27 H 0.126 0.874 28 H 0.047 0.953 29 H 0.066 0.934 30 H 0.088 0.912 31 H 0.098 0.902 32 H 0.241 0.759 33 H 0.089 0.911 34 H 0.088 0.912 35 H 0.089 0.911 36 H 0.144 0.856 37 H 0.087 0.913 38 H 0.085 0.915 39 H 0.084 0.916 40 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 9.755 -7.122 15.792 19.882 hybrid contribution -0.303 0.936 -0.372 1.052 sum 9.452 -6.186 15.421 19.115 Atomic orbital electron populations 1.24181 0.95310 1.06699 1.06614 1.24320 0.95241 0.94580 0.94969 1.17801 0.82377 0.87148 0.98090 1.43518 1.73273 1.12139 0.98717 1.19112 1.22042 0.95739 1.01489 0.91155 1.24997 0.96884 0.98559 0.98815 1.69982 1.27734 1.39356 1.17176 0.86245 0.78435 0.82359 0.78920 1.20945 1.21598 1.20987 1.20614 0.90417 1.00205 0.88209 1.23497 0.93211 0.78230 0.80522 1.90781 1.50831 1.45461 1.47447 1.44112 1.15369 1.64122 1.09910 1.17390 0.88422 0.92195 0.95391 1.19690 0.94629 0.98383 0.97747 1.20716 1.01585 0.95578 0.98972 1.20749 0.95136 0.96573 0.99825 1.19707 0.97066 0.97227 0.95838 1.20723 0.93118 1.00656 1.01995 1.20773 0.92902 1.00705 0.97879 1.20909 0.95694 0.96334 0.93578 1.98410 1.73235 1.84872 1.43731 0.79235 0.87401 0.95318 0.93371 0.91202 0.90154 0.75905 0.91104 0.91217 0.91102 0.85622 0.91291 0.91540 0.91550 0.85206 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.31 -7.05 19.25 29.55 0.57 -6.48 16 2 C -0.09 -2.18 11.60 -37.12 -0.43 -2.61 16 3 C 0.27 6.74 5.40 -6.83 -0.04 6.70 16 4 N -0.56 -13.83 1.98 -177.94 -0.35 -14.18 16 5 C -0.25 -6.94 9.69 -15.06 -0.15 -7.09 16 6 H 0.07 1.91 7.84 -52.48 -0.41 1.50 16 7 C 0.01 0.16 5.16 -17.43 -0.09 0.07 16 8 N -0.90 -25.68 8.98 55.49 0.50 -25.18 16 9 Si 0.91 22.15 29.56 -169.99 -5.02 17.12 16 10 H -0.28 -6.95 7.11 56.52 0.40 -6.54 16 11 H -0.29 -7.10 7.11 56.52 0.40 -6.70 16 12 H -0.28 -6.78 7.11 56.52 0.40 -6.38 16 13 C 0.14 2.70 6.15 -5.19 -0.03 2.67 16 14 C 0.46 8.65 6.67 -10.99 -0.07 8.58 16 15 O -0.48 -10.80 12.46 5.55 0.07 -10.73 16 16 N -0.69 -9.98 4.49 -9.83 -0.04 -10.02 16 17 C 0.16 2.40 6.09 -83.65 -0.51 1.89 16 18 C -0.10 -1.22 5.90 -104.44 -0.62 -1.83 16 19 C -0.11 -1.01 9.53 36.00 0.34 -0.67 16 20 C -0.10 -1.12 9.35 -39.60 -0.37 -1.49 16 21 C -0.10 -1.08 5.88 -104.59 -0.62 -1.70 16 22 C -0.11 -0.85 10.01 36.01 0.36 -0.49 16 23 C -0.10 -1.36 9.48 -39.58 -0.38 -1.74 16 24 C -0.04 -0.56 5.85 -39.32 -0.23 -0.79 16 25 Cl -0.03 -0.57 24.09 -51.86 -1.25 -1.82 16 26 H 0.19 3.60 7.80 -54.08 -0.42 3.18 16 27 H 0.11 3.00 6.28 -51.93 -0.33 2.67 16 28 H 0.03 0.67 8.12 -51.93 -0.42 0.25 16 29 H 0.26 7.22 8.31 -40.82 -0.34 6.88 16 30 H 0.07 1.24 8.07 -51.93 -0.42 0.82 16 31 H 0.08 1.46 8.04 -51.93 -0.42 1.04 16 32 H 0.41 4.46 8.21 -40.82 -0.34 4.13 16 33 H 0.07 0.52 8.14 -51.93 -0.42 0.09 16 34 H 0.07 0.55 8.09 -51.92 -0.42 0.13 16 35 H 0.07 0.69 7.30 -51.93 -0.38 0.31 16 36 H 0.13 1.02 8.06 -52.49 -0.42 0.60 16 37 H 0.07 0.46 8.14 -51.93 -0.42 0.04 16 38 H 0.07 0.50 8.08 -51.93 -0.42 0.08 16 39 H 0.07 0.45 8.08 -51.93 -0.42 0.03 16 40 H 0.13 1.52 8.06 -52.49 -0.42 1.10 16 LS Contribution 355.52 15.07 5.36 5.36 Total: -1.00 -33.01 355.52 -8.21 -41.22 By element: Atomic # 1 Polarization: 8.43 SS G_CDS: -5.22 Total: 3.21 kcal Atomic # 6 Polarization: -2.73 SS G_CDS: -2.25 Total: -4.98 kcal Atomic # 7 Polarization: -49.49 SS G_CDS: 0.10 Total: -49.39 kcal Atomic # 8 Polarization: -10.80 SS G_CDS: 0.07 Total: -10.73 kcal Atomic # 14 Polarization: 22.15 SS G_CDS: -5.02 Total: 17.12 kcal Atomic # 17 Polarization: -0.57 SS G_CDS: -1.25 Total: -1.82 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -33.01 -8.21 -41.22 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000281502042.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 124.709 kcal (2) G-P(sol) polarization free energy of solvation -33.008 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 91.701 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.214 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.222 kcal (6) G-S(sol) free energy of system = (1) + (5) 83.486 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds