Wall clock time and date at job start Tue Mar 31 2020 12:19:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.35376 * 126.13555 * 2 1 4 4 Cl 1.73598 * 126.04743 * 0.03208 * 3 2 1 5 5 C 1.39925 * 107.90863 * 180.02562 * 3 2 1 6 6 N 1.30849 * 108.21529 * 359.71171 * 5 3 2 7 7 N 1.35043 * 126.13913 * 180.02562 * 2 1 3 8 8 C 1.46502 * 126.03441 * 359.97438 * 7 2 1 9 9 N 1.46904 * 109.46969 * 89.99798 * 8 7 2 10 10 C 1.46905 * 111.00100 * 66.04617 * 9 8 7 11 11 C 1.50700 * 109.46885 * 293.95288 * 10 9 8 12 12 H 1.07997 * 119.99834 * 359.97438 * 11 10 9 13 13 C 1.37879 * 119.99884 * 179.97438 * 11 10 9 14 14 N 1.31506 * 119.99896 * 179.97438 * 13 11 10 15 15 Si 1.86807 * 119.99869 * 0.02562 * 13 11 10 16 16 H 1.48500 * 109.47074 * 89.99478 * 15 13 11 17 17 H 1.48496 * 109.47037 * 209.99406 * 15 13 11 18 18 H 1.48499 * 109.47037 * 329.99850 * 15 13 11 19 19 C 1.46896 * 110.99889 * 189.99825 * 9 8 7 20 20 C 1.50706 * 109.47320 * 169.99825 * 19 9 8 21 21 C 1.38675 * 120.41529 * 89.99996 * 20 19 9 22 22 C 1.38631 * 118.41792 * 179.97438 * 21 20 19 23 23 C 1.38221 * 119.16077 * 0.25627 * 22 21 20 24 24 N 1.31860 * 120.76509 * 359.49797 * 23 22 21 25 25 C 1.31882 * 121.72556 * 0.49011 * 24 23 22 26 26 H 1.09000 * 109.47332 * 269.98119 * 1 2 3 27 27 H 1.08997 * 109.47565 * 29.97727 * 1 2 3 28 28 H 1.09001 * 109.47261 * 149.98480 * 1 2 3 29 29 H 1.08001 * 125.89266 * 179.97438 * 5 3 2 30 30 H 1.09002 * 109.47396 * 329.99898 * 8 7 2 31 31 H 1.08997 * 109.47456 * 209.99654 * 8 7 2 32 32 H 1.09004 * 109.46773 * 53.95127 * 10 9 8 33 33 H 1.08997 * 109.46918 * 173.95057 * 10 9 8 34 34 H 0.97006 * 119.99571 * 180.02562 * 14 13 11 35 35 H 1.09008 * 109.47342 * 49.99939 * 19 9 8 36 36 H 1.08998 * 109.47612 * 289.99867 * 19 9 8 37 37 H 1.07998 * 120.79161 * 359.96013 * 21 20 19 38 38 H 1.08002 * 120.41548 * 179.97438 * 22 21 20 39 39 H 1.08002 * 119.62066 * 179.74470 * 23 22 21 40 40 H 1.07993 * 119.62126 * 179.75488 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.3052 1.0933 0.0000 4 17 1.7741 2.7460 0.0008 5 6 3.6343 0.6557 -0.0006 6 7 3.6340 -0.6528 0.0053 7 7 2.3033 -1.0906 -0.0005 8 6 1.8548 -2.4853 -0.0006 9 7 1.7044 -2.9511 -1.3857 10 6 3.0043 -3.0020 -2.0681 11 6 3.5484 -1.6046 -2.2170 12 1 2.9848 -0.7629 -1.8425 13 6 4.7658 -1.4006 -2.8313 14 7 5.2404 -0.1811 -2.9617 15 14 5.7404 -2.8565 -3.4797 16 1 5.3541 -3.1227 -4.8887 17 1 7.1917 -2.5494 -3.4139 18 1 5.4498 -4.0547 -2.6521 19 6 1.0342 -4.2575 -1.4318 20 6 0.6775 -4.5891 -2.8580 21 6 1.5701 -5.2818 -3.6620 22 6 1.1993 -5.5654 -4.9673 23 6 -0.0368 -5.1465 -5.4224 24 7 -0.8623 -4.4937 -4.6279 25 6 -0.5432 -4.2071 -3.3808 26 1 -0.3634 -0.0003 1.0277 27 1 -0.3634 0.8901 -0.5135 28 1 -0.3634 -0.8898 -0.5141 29 1 4.5093 1.2887 -0.0011 30 1 0.8965 -2.5589 0.5136 31 1 2.5910 -3.1038 0.5128 32 1 3.6996 -3.6020 -1.4811 33 1 2.8798 -3.4504 -3.0538 34 1 6.0968 -0.0377 -3.3943 35 1 0.1265 -4.2217 -0.8292 36 1 1.7023 -5.0229 -1.0371 37 1 2.5314 -5.5928 -3.2804 38 1 1.8696 -6.1028 -5.6218 39 1 -0.3317 -5.3598 -6.4393 40 1 -1.2438 -3.6673 -2.7611 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000156461317.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:19:07 Heat of formation + Delta-G solvation = 152.388286 kcal Electronic energy + Delta-G solvation = -25182.674011 eV Core-core repulsion = 21640.960681 eV Total energy + Delta-G solvation = -3541.713331 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 320.110 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -40.64172 -40.02067 -37.05008 -35.66104 -32.88660 -32.67724 -31.85608 -31.44694 -30.19486 -28.23508 -26.20398 -25.96395 -23.87194 -23.37878 -22.03236 -20.69203 -20.27756 -19.00283 -17.24180 -16.93674 -16.29817 -16.16030 -15.28101 -15.07366 -14.75467 -14.16710 -13.97714 -13.85992 -13.45131 -13.35404 -13.02457 -12.92368 -12.75725 -12.54505 -12.48641 -12.07911 -12.00064 -11.68427 -11.50891 -11.26045 -11.14070 -10.63177 -10.51790 -10.48977 -9.93633 -9.63222 -9.50436 -9.33872 -9.00725 -8.86711 -8.59754 -8.30328 -7.81117 -7.35757 -5.95516 -3.85417 1.24949 1.44107 2.51452 2.85307 3.25529 3.31108 3.34544 3.57941 3.74075 3.93530 4.44826 4.54264 4.61627 4.88125 4.95819 5.11567 5.12173 5.18349 5.24326 5.35596 5.43869 5.45366 5.56186 5.60934 5.80178 5.82314 5.90817 5.98722 6.19939 6.24999 6.39101 6.41274 6.55193 6.68357 6.72881 6.84403 7.30097 7.37351 7.52124 7.71584 7.90774 8.11490 8.62025 8.64530 9.11260 9.63086 11.15066 Molecular weight = 320.11amu Principal moments of inertia in cm(-1) A = 0.011757 B = 0.005438 C = 0.004256 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2380.971248 B = 5147.568650 C = 6576.637561 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.092 3.908 3 C -0.181 4.181 4 Cl -0.073 7.073 5 C 0.052 3.948 6 N -0.191 5.191 7 N -0.349 5.349 8 C 0.321 3.679 9 N -0.542 5.542 10 C 0.159 3.841 11 C -0.492 4.492 12 H 0.100 0.900 13 C 0.079 3.921 14 N -0.884 5.884 15 Si 0.860 3.140 16 H -0.281 1.281 17 H -0.287 1.287 18 H -0.273 1.273 19 C 0.100 3.900 20 C -0.116 4.116 21 C -0.063 4.063 22 C -0.175 4.175 23 C 0.092 3.908 24 N -0.489 5.489 25 C 0.118 3.882 26 H 0.070 0.930 27 H 0.079 0.921 28 H 0.074 0.926 29 H 0.173 0.827 30 H 0.090 0.910 31 H 0.061 0.939 32 H -0.010 1.010 33 H 0.028 0.972 34 H 0.260 0.740 35 H 0.081 0.919 36 H 0.042 0.958 37 H 0.129 0.871 38 H 0.131 0.869 39 H 0.151 0.849 40 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.942 -6.916 4.871 13.054 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.036 4.036 3 C -0.220 4.220 4 Cl -0.045 7.045 5 C -0.136 4.136 6 N -0.008 5.008 7 N -0.133 5.133 8 C 0.109 3.891 9 N -0.268 5.268 10 C 0.033 3.967 11 C -0.531 4.531 12 H 0.118 0.882 13 C -0.124 4.124 14 N -0.523 5.523 15 Si 0.688 3.312 16 H -0.207 1.207 17 H -0.213 1.213 18 H -0.198 1.198 19 C -0.029 4.029 20 C -0.118 4.118 21 C -0.089 4.089 22 C -0.195 4.195 23 C -0.065 4.065 24 N -0.198 5.198 25 C -0.039 4.039 26 H 0.088 0.912 27 H 0.097 0.903 28 H 0.092 0.908 29 H 0.190 0.810 30 H 0.108 0.892 31 H 0.079 0.921 32 H 0.007 0.993 33 H 0.046 0.954 34 H 0.070 0.930 35 H 0.100 0.900 36 H 0.060 0.940 37 H 0.147 0.853 38 H 0.149 0.851 39 H 0.168 0.832 40 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -10.249 -7.281 4.271 13.278 hybrid contribution 1.808 -0.650 -0.211 1.933 sum -8.441 -7.931 4.060 12.273 Atomic orbital electron populations 1.20343 0.88043 1.03916 1.02124 1.20268 0.93919 0.86866 1.02539 1.20318 0.93583 0.84465 1.23642 1.98241 1.90467 1.17778 1.98000 1.23348 0.95524 0.92228 1.02540 1.77758 0.95254 1.10907 1.16889 1.47979 1.03747 1.04319 1.57297 1.21610 0.98225 0.78827 0.90427 1.62050 1.26169 1.24286 1.14290 1.20379 0.83460 0.99434 0.93428 1.21404 1.03866 0.91618 1.36222 0.88193 1.24733 0.97112 0.94705 0.95811 1.69855 1.19397 1.19538 1.43512 0.87124 0.80183 0.84401 0.79467 1.20726 1.21345 1.19782 1.20825 0.98931 0.90787 0.92371 1.20663 0.95484 0.98386 0.97261 1.21533 0.98540 0.95130 0.93734 1.22076 0.98325 1.02495 0.96611 1.22660 0.90464 0.94174 0.99171 1.67668 1.34942 1.12194 1.04962 1.22549 0.94672 0.95242 0.91438 0.91175 0.90258 0.90753 0.80975 0.89191 0.92137 0.99289 0.95449 0.93025 0.90017 0.94001 0.85312 0.85144 0.83170 0.82935 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.19 9.73 36.00 0.35 -0.84 16 2 C 0.09 1.68 6.42 -82.20 -0.53 1.16 16 3 C -0.18 -3.58 6.55 -39.97 -0.26 -3.84 16 4 Cl -0.07 -1.25 28.88 -51.86 -1.50 -2.75 16 5 C 0.05 1.13 11.35 -17.34 -0.20 0.93 16 6 N -0.19 -4.37 9.31 30.64 0.29 -4.08 16 7 N -0.35 -6.87 2.29 -60.09 -0.14 -7.01 16 8 C 0.32 5.26 5.75 -63.31 -0.36 4.90 16 9 N -0.54 -9.71 4.68 -241.42 -1.13 -10.84 16 10 C 0.16 3.55 3.58 -4.97 -0.02 3.53 16 11 C -0.49 -13.09 6.76 -34.44 -0.23 -13.33 16 12 H 0.10 2.85 4.06 -52.49 -0.21 2.64 16 13 C 0.08 2.20 5.47 -17.82 -0.10 2.10 16 14 N -0.88 -26.02 13.96 55.43 0.77 -25.25 16 15 Si 0.86 21.24 27.47 -169.99 -4.67 16.57 16 16 H -0.28 -6.94 7.11 56.52 0.40 -6.53 16 17 H -0.29 -7.18 7.11 56.52 0.40 -6.78 16 18 H -0.27 -6.45 6.54 56.52 0.37 -6.08 16 19 C 0.10 1.37 5.14 -4.98 -0.03 1.34 16 20 C -0.12 -1.70 4.92 -104.48 -0.51 -2.21 16 21 C -0.06 -0.93 8.03 -39.28 -0.32 -1.24 16 22 C -0.18 -2.35 10.11 -39.44 -0.40 -2.75 16 23 C 0.09 1.25 11.18 -17.55 -0.20 1.06 16 24 N -0.49 -7.47 10.36 -13.25 -0.14 -7.61 16 25 C 0.12 1.72 10.86 -17.55 -0.19 1.53 16 26 H 0.07 0.79 8.14 -51.93 -0.42 0.37 16 27 H 0.08 1.09 7.91 -51.93 -0.41 0.68 16 28 H 0.07 0.98 7.73 -51.93 -0.40 0.58 16 29 H 0.17 3.65 8.06 -52.49 -0.42 3.23 16 30 H 0.09 1.11 7.45 -51.93 -0.39 0.73 16 31 H 0.06 0.99 8.06 -51.93 -0.42 0.58 16 32 H -0.01 -0.24 7.12 -51.93 -0.37 -0.61 16 33 H 0.03 0.63 4.93 -51.93 -0.26 0.38 16 34 H 0.26 7.35 8.31 -40.82 -0.34 7.01 16 35 H 0.08 0.86 7.88 -51.92 -0.41 0.45 16 36 H 0.04 0.55 8.07 -51.93 -0.42 0.13 16 37 H 0.13 1.86 7.90 -52.49 -0.41 1.44 16 38 H 0.13 1.42 8.06 -52.49 -0.42 1.00 16 39 H 0.15 1.58 8.06 -52.49 -0.42 1.15 16 40 H 0.15 1.88 8.06 -52.49 -0.42 1.46 16 LS Contribution 343.33 15.07 5.17 5.17 Total: -1.00 -32.35 343.33 -9.31 -41.66 By element: Atomic # 1 Polarization: 6.80 SS G_CDS: -4.98 Total: 1.82 kcal Atomic # 6 Polarization: -4.69 SS G_CDS: -2.99 Total: -7.68 kcal Atomic # 7 Polarization: -54.44 SS G_CDS: -0.35 Total: -54.79 kcal Atomic # 14 Polarization: 21.24 SS G_CDS: -4.67 Total: 16.57 kcal Atomic # 17 Polarization: -1.25 SS G_CDS: -1.50 Total: -2.75 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -32.35 -9.31 -41.66 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000156461317.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 194.051 kcal (2) G-P(sol) polarization free energy of solvation -32.354 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 161.697 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.308 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.662 kcal (6) G-S(sol) free energy of system = (1) + (5) 152.388 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds