Wall clock time and date at job start Tue Mar 31 2020 13:05:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.35844 * 126.05896 * 2 1 4 4 C 1.35731 * 107.55962 * 180.12152 * 3 2 1 5 5 N 1.40845 * 126.07362 * 179.90232 * 4 3 2 6 6 C 1.34777 * 120.00214 * 359.40558 * 5 4 3 7 7 O 1.21609 * 119.99718 * 0.02562 * 6 5 4 8 8 N 1.34774 * 120.00311 * 180.02562 * 6 5 4 9 9 C 1.46507 * 120.00020 * 180.02562 * 8 6 5 10 10 C 1.53003 * 109.46865 * 180.02562 * 9 8 6 11 11 C 1.53003 * 109.46813 * 179.97438 * 10 9 8 12 12 C 1.50700 * 109.46808 * 179.97438 * 11 10 9 13 13 H 1.07996 * 120.00289 * 0.02562 * 12 11 10 14 14 C 1.37881 * 119.99495 * 179.97438 * 12 11 10 15 15 N 1.31512 * 119.99471 * 180.02562 * 14 12 11 16 16 Si 1.86795 * 120.00359 * 0.02562 * 14 12 11 17 17 H 1.48501 * 109.47342 * 89.99680 * 16 14 12 18 18 H 1.48503 * 109.47331 * 210.00014 * 16 14 12 19 19 H 1.48503 * 109.47114 * 330.00054 * 16 14 12 20 20 C 1.40233 * 107.85264 * 359.63428 * 4 3 2 21 21 C 1.50698 * 125.83231 * 180.23356 * 20 4 3 22 22 F 1.39894 * 109.47470 * 89.99492 * 21 20 4 23 23 F 1.39890 * 109.46995 * 209.99986 * 21 20 4 24 24 F 1.39900 * 109.46780 * 329.99605 * 21 20 4 25 25 N 1.30839 * 108.33771 * 0.22515 * 20 4 3 26 26 H 1.09009 * 109.46748 * 270.27196 * 1 2 3 27 27 H 1.09002 * 109.47376 * 30.26014 * 1 2 3 28 28 H 1.08990 * 109.47421 * 150.26968 * 1 2 3 29 29 H 1.08001 * 126.21995 * 359.97438 * 3 2 1 30 30 H 0.96996 * 120.00239 * 179.68682 * 5 4 3 31 31 H 0.97004 * 120.00041 * 359.97438 * 8 6 5 32 32 H 1.09001 * 109.46735 * 299.99355 * 9 8 6 33 33 H 1.09001 * 109.47209 * 59.99929 * 9 8 6 34 34 H 1.09001 * 109.46782 * 299.99161 * 10 9 8 35 35 H 1.08993 * 109.47555 * 59.99604 * 10 9 8 36 36 H 1.08996 * 109.46739 * 299.99960 * 11 10 9 37 37 H 1.09001 * 109.47095 * 59.99865 * 11 10 9 38 38 H 0.97007 * 119.99825 * 180.02562 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2646 1.0982 0.0000 4 6 3.5518 0.6675 -0.0027 5 7 4.6995 1.4839 -0.0056 6 6 4.5720 2.8256 -0.0179 7 8 3.4661 3.3313 -0.0261 8 7 5.6702 3.6069 -0.0212 9 6 5.5317 5.0653 -0.0341 10 6 6.9195 5.7094 -0.0359 11 6 6.7748 7.2325 -0.0500 12 6 8.1417 7.8670 -0.0512 13 1 9.0253 7.2460 -0.0432 14 6 8.2643 9.2403 -0.0636 15 7 9.4572 9.7939 -0.0651 16 14 6.7361 10.3143 -0.0781 17 1 6.3268 10.6119 1.3181 18 1 7.0304 11.5845 -0.7891 19 1 5.6359 9.6005 -0.7748 20 6 3.5360 -0.7347 0.0041 21 6 4.7477 -1.6306 0.0088 22 9 5.1224 -1.9014 1.3292 23 9 4.4438 -2.8294 -0.6449 24 9 5.8019 -0.9926 -0.6535 25 7 2.2895 -1.1323 0.0057 26 1 -0.3633 0.0049 1.0278 27 1 -0.3634 0.8876 -0.5179 28 1 -0.3634 -0.8923 -0.5096 29 1 1.9359 2.1269 -0.0004 30 1 5.5816 1.0806 -0.0029 31 1 6.5524 3.2036 -0.0144 32 1 4.9886 5.3708 -0.9284 33 1 4.9830 5.3860 0.8516 34 1 7.4630 5.4040 0.8582 35 1 7.4678 5.3888 -0.9217 36 1 6.2314 7.5376 -0.9442 37 1 6.2264 7.5536 0.8356 38 1 9.5434 10.7601 -0.0735 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000446275140.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:05:45 Heat of formation + Delta-G solvation = -102.484367 kcal Electronic energy + Delta-G solvation = -26335.256577 eV Core-core repulsion = 21799.925234 eV Total energy + Delta-G solvation = -4535.331343 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 320.120 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -50.54620 -48.10894 -47.99662 -41.96221 -39.97084 -35.95881 -35.08932 -33.66516 -33.33002 -31.53647 -29.86573 -28.65426 -27.11119 -25.34836 -23.29806 -22.21716 -21.50229 -20.98368 -20.18794 -19.01457 -18.87330 -18.60674 -17.70162 -17.30210 -16.72167 -16.21166 -16.02694 -15.61394 -14.99973 -14.86730 -14.79355 -14.47184 -14.37786 -14.33755 -14.15932 -14.12404 -13.92553 -13.90477 -13.35399 -13.31407 -12.73255 -12.61908 -12.18134 -11.97100 -11.55486 -11.15441 -11.12070 -10.90308 -10.40591 -10.10153 -10.06950 -9.88760 -9.73345 -9.25764 -9.07923 -8.57847 -8.12851 -6.08422 -4.07379 1.08993 1.51382 1.87169 2.20448 2.65143 3.15713 3.26458 3.29293 3.37092 3.40561 3.48514 3.98442 4.03923 4.24327 4.42160 4.53784 4.70187 4.96465 5.08159 5.13507 5.25591 5.31482 5.46265 5.61209 5.95726 6.12732 6.23783 6.40348 6.51297 6.56379 6.71169 6.75605 6.91330 7.19305 7.32709 7.72547 7.81220 8.38347 8.48029 8.95504 9.53592 11.04811 Molecular weight = 320.12amu Principal moments of inertia in cm(-1) A = 0.021290 B = 0.002403 C = 0.002192 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1314.871916 B =11651.046781 C =12770.212717 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.102 3.898 2 N -0.351 5.351 3 C 0.048 3.952 4 C 0.062 3.938 5 N -0.663 5.663 6 C 0.706 3.294 7 O -0.584 6.584 8 N -0.732 5.732 9 C 0.132 3.868 10 C -0.114 4.114 11 C -0.010 4.010 12 C -0.523 4.523 13 H 0.072 0.928 14 C 0.066 3.934 15 N -0.903 5.903 16 Si 0.880 3.120 17 H -0.277 1.277 18 H -0.288 1.288 19 H -0.264 1.264 20 C -0.043 4.043 21 C 0.558 3.442 22 F -0.166 7.166 23 F -0.164 7.164 24 F -0.167 7.167 25 N -0.229 5.229 26 H 0.083 0.917 27 H 0.098 0.902 28 H 0.094 0.906 29 H 0.216 0.784 30 H 0.410 0.590 31 H 0.399 0.601 32 H 0.066 0.934 33 H 0.065 0.935 34 H 0.061 0.939 35 H 0.062 0.938 36 H 0.019 0.981 37 H 0.015 0.985 38 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -16.074 -24.456 0.098 29.265 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.038 4.038 2 N -0.138 5.138 3 C -0.099 4.099 4 C -0.044 4.044 5 N -0.312 5.312 6 C 0.407 3.593 7 O -0.462 6.462 8 N -0.385 5.385 9 C 0.009 3.991 10 C -0.152 4.152 11 C -0.048 4.048 12 C -0.561 4.561 13 H 0.090 0.910 14 C -0.135 4.135 15 N -0.541 5.541 16 Si 0.707 3.293 17 H -0.202 1.202 18 H -0.214 1.214 19 H -0.189 1.189 20 C -0.210 4.210 21 C 0.502 3.498 22 F -0.147 7.147 23 F -0.146 7.146 24 F -0.149 7.149 25 N -0.055 5.055 26 H 0.101 0.899 27 H 0.116 0.884 28 H 0.113 0.887 29 H 0.232 0.768 30 H 0.247 0.753 31 H 0.233 0.767 32 H 0.084 0.916 33 H 0.084 0.916 34 H 0.080 0.920 35 H 0.080 0.920 36 H 0.037 0.963 37 H 0.033 0.967 38 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -17.821 -24.721 0.089 30.475 hybrid contribution 0.920 0.832 0.026 1.241 sum -16.900 -23.889 0.115 29.263 Atomic orbital electron populations 1.22053 0.72245 1.05305 1.04228 1.48505 1.07027 1.02893 1.55332 1.23275 0.88524 0.94442 1.03628 1.16921 0.87676 0.87136 1.12670 1.42165 1.07243 1.04432 1.77398 1.15805 0.85369 0.80123 0.78041 1.90751 1.24442 1.72994 1.58033 1.45288 1.07053 1.07832 1.78376 1.21615 0.99845 0.75500 1.02114 1.21729 0.93178 0.98418 1.01910 1.19496 0.98204 0.90422 0.96701 1.21091 0.91827 0.91996 1.51167 0.90987 1.25033 0.95864 0.98137 0.94461 1.69913 1.22365 1.10951 1.50914 0.86772 0.83950 0.79975 0.78567 1.20248 1.21389 1.18876 1.21659 0.93542 0.92140 1.13697 1.16842 0.80895 0.77886 0.74210 1.93264 1.92074 1.93988 1.35424 1.93241 1.92982 1.47185 1.81158 1.93177 1.59046 1.81655 1.81008 1.77200 0.98753 1.09269 1.20286 0.89887 0.88391 0.88711 0.76796 0.75327 0.76666 0.91610 0.91614 0.91999 0.91968 0.96261 0.96699 0.92676 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 0.46 11.48 59.85 0.69 1.15 16 2 N -0.35 -3.31 4.04 -67.82 -0.27 -3.59 16 3 C 0.05 0.53 10.38 -16.67 -0.17 0.36 16 4 C 0.06 0.73 6.78 -83.86 -0.57 0.16 16 5 N -0.66 -7.42 5.39 -14.39 -0.08 -7.49 16 6 C 0.71 9.52 8.54 -86.92 -0.74 8.78 16 7 O -0.58 -9.30 13.50 5.27 0.07 -9.23 16 8 N -0.73 -9.26 5.56 -65.21 -0.36 -9.62 16 9 C 0.13 2.02 5.67 -4.04 -0.02 2.00 16 10 C -0.11 -2.01 5.27 -26.73 -0.14 -2.16 16 11 C -0.01 -0.23 4.04 -27.88 -0.11 -0.34 16 12 C -0.52 -14.43 9.66 -34.44 -0.33 -14.76 16 13 H 0.07 2.12 7.99 -52.49 -0.42 1.70 16 14 C 0.07 1.90 5.47 -17.82 -0.10 1.80 16 15 N -0.90 -27.43 13.96 55.43 0.77 -26.66 16 16 Si 0.88 21.32 27.47 -169.99 -4.67 16.65 16 17 H -0.28 -6.59 7.11 56.52 0.40 -6.19 16 18 H -0.29 -6.94 7.11 56.52 0.40 -6.54 16 19 H -0.26 -6.13 6.54 56.52 0.37 -5.76 16 20 C -0.04 -0.49 6.57 -82.27 -0.54 -1.03 16 21 C 0.56 5.68 3.54 36.00 0.13 5.81 16 22 F -0.17 -1.70 17.30 2.25 0.04 -1.66 16 23 F -0.16 -1.73 17.25 2.25 0.04 -1.69 16 24 F -0.17 -1.56 15.25 2.25 0.03 -1.52 16 25 N -0.23 -2.60 12.49 33.74 0.42 -2.17 16 26 H 0.08 0.27 8.14 -51.92 -0.42 -0.15 16 27 H 0.10 0.26 8.14 -51.93 -0.42 -0.16 16 28 H 0.09 0.33 8.14 -51.93 -0.42 -0.10 16 29 H 0.22 2.42 5.84 -52.49 -0.31 2.11 16 30 H 0.41 3.70 6.96 -40.82 -0.28 3.42 16 31 H 0.40 4.02 8.49 -40.82 -0.35 3.67 16 32 H 0.07 1.05 8.14 -51.93 -0.42 0.62 16 33 H 0.07 1.04 8.14 -51.93 -0.42 0.62 16 34 H 0.06 1.07 8.14 -51.93 -0.42 0.64 16 35 H 0.06 1.07 8.14 -51.93 -0.42 0.65 16 36 H 0.02 0.44 7.20 -51.93 -0.37 0.06 16 37 H 0.01 0.33 7.57 -51.93 -0.39 -0.06 16 38 H 0.26 7.50 8.31 -40.82 -0.34 7.16 16 LS Contribution 339.72 15.07 5.12 5.12 Total: -1.00 -33.36 339.72 -5.05 -38.41 By element: Atomic # 1 Polarization: 5.95 SS G_CDS: -4.25 Total: 1.70 kcal Atomic # 6 Polarization: 3.67 SS G_CDS: -1.92 Total: 1.76 kcal Atomic # 7 Polarization: -50.01 SS G_CDS: 0.48 Total: -49.53 kcal Atomic # 8 Polarization: -9.30 SS G_CDS: 0.07 Total: -9.23 kcal Atomic # 9 Polarization: -4.99 SS G_CDS: 0.11 Total: -4.88 kcal Atomic # 14 Polarization: 21.32 SS G_CDS: -4.67 Total: 16.65 kcal Total LS contribution 5.12 Total: 5.12 kcal Total: -33.36 -5.05 -38.41 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000446275140.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.076 kcal (2) G-P(sol) polarization free energy of solvation -33.357 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.433 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.051 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.409 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.484 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds