Wall clock time and date at job start Tue Mar 31 2020 12:33:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 N 1.46499 * 109.47147 * 2 1 4 4 C 1.46506 * 119.99936 * 89.99619 * 3 2 1 5 5 C 1.50703 * 109.46877 * 90.00092 * 4 3 2 6 6 H 1.08005 * 119.99817 * 0.02562 * 5 4 3 7 7 C 1.37871 * 120.00081 * 179.97438 * 5 4 3 8 8 N 1.31520 * 119.99848 * 0.02562 * 7 5 4 9 9 Si 1.86798 * 120.00321 * 179.97438 * 7 5 4 10 10 H 1.48504 * 109.46938 * 0.02562 * 9 7 5 11 11 H 1.48501 * 109.47198 * 120.00527 * 9 7 5 12 12 H 1.48498 * 109.47360 * 240.00281 * 9 7 5 13 13 C 1.34773 * 120.00036 * 270.27655 * 3 2 1 14 14 O 1.21281 * 120.00220 * 179.72597 * 13 3 2 15 15 C 1.50706 * 120.00080 * 359.72107 * 13 3 2 16 16 C 1.52992 * 109.47274 * 180.02562 * 15 13 3 17 17 H 1.09000 * 110.45713 * 56.13404 * 16 15 13 18 18 C 1.51139 * 110.50746 * 178.88078 * 16 15 13 19 19 C 1.37742 * 132.82771 * 298.65119 * 18 16 15 20 20 C 1.38369 * 119.96093 * 179.97438 * 19 18 16 21 21 C 1.38313 * 119.84437 * 0.02797 * 20 19 18 22 22 C 1.38108 * 120.34511 * 359.97375 * 21 20 19 23 23 F 1.35098 * 119.95625 * 180.02562 * 22 21 20 24 24 C 1.38817 * 106.35472 * 118.64743 * 18 16 15 25 25 N 1.39648 * 110.23501 * 359.97438 * 24 18 16 26 26 C 1.34369 * 112.21579 * 0.02562 * 25 24 18 27 27 O 1.21296 * 126.44682 * 179.97438 * 26 25 24 28 28 H 1.09005 * 109.47395 * 180.02562 * 1 2 3 29 29 H 1.09003 * 109.47272 * 300.00321 * 1 2 3 30 30 H 1.08997 * 109.47273 * 60.00010 * 1 2 3 31 31 H 1.08994 * 109.47531 * 239.99672 * 2 1 3 32 32 H 1.09005 * 109.46544 * 119.99607 * 2 1 3 33 33 H 1.09000 * 109.46803 * 209.99571 * 4 3 2 34 34 H 1.09000 * 109.47214 * 330.00364 * 4 3 2 35 35 H 0.96998 * 119.99944 * 179.97438 * 8 7 5 36 36 H 1.09004 * 109.46762 * 300.00389 * 15 13 3 37 37 H 1.08998 * 109.46924 * 59.99727 * 15 13 3 38 38 H 1.07999 * 120.01904 * 0.04295 * 19 18 16 39 39 H 1.07996 * 120.07235 * 180.02562 * 20 19 18 40 40 H 1.08005 * 119.82320 * 179.97438 * 21 20 19 41 41 H 0.96998 * 123.89340 * 180.02562 * 25 24 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.2624 2.0718 1.2688 5 6 3.6857 1.8350 1.7039 6 1 4.3428 1.2309 1.0958 7 6 4.1493 2.3905 2.8775 8 7 3.3493 3.1266 3.6176 9 14 5.9133 2.0964 3.4172 10 1 6.6007 1.2403 2.4172 11 1 6.6214 3.3972 3.5249 12 1 5.9203 1.4182 4.7383 13 6 2.2377 2.0184 -1.1671 14 8 2.6372 3.1635 -1.1672 15 6 1.9865 1.3080 -2.4723 16 6 2.3120 2.2474 -3.6352 17 1 3.3370 2.6098 -3.5568 18 6 2.0941 1.5485 -4.9574 19 6 2.6642 0.4343 -5.5327 20 6 2.2543 0.0180 -6.7870 21 6 1.2729 0.7232 -7.4597 22 6 0.6993 1.8408 -6.8858 23 9 -0.2591 2.5234 -7.5497 24 6 1.1081 2.2658 -5.6209 25 7 0.6883 3.3453 -4.8407 26 6 1.3399 3.4076 -3.6672 27 8 1.1795 4.2375 -2.7972 28 1 -0.3634 -1.0277 0.0005 29 1 -0.3634 0.5139 0.8900 30 1 -0.3634 0.5138 -0.8900 31 1 1.8934 -0.5138 -0.8899 32 1 1.8933 -0.5138 0.8901 33 1 2.0955 3.1411 1.1383 34 1 1.5816 1.6877 2.0284 35 1 3.6753 3.5170 4.4435 36 1 2.6203 0.4232 -2.5321 37 1 0.9397 1.0094 -2.5279 38 1 3.4298 -0.1146 -5.0046 39 1 2.6997 -0.8556 -7.2396 40 1 0.9535 0.3981 -8.4389 41 1 0.0052 3.9772 -5.1143 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000930464065.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:33:04 Heat of formation + Delta-G solvation = -77.189082 kcal Electronic energy + Delta-G solvation = -26936.462680 eV Core-core repulsion = 22924.165001 eV Total energy + Delta-G solvation = -4012.297679 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 320.132 amu Computer time = 2.17 seconds Orbital eigenvalues (eV) -49.16204 -41.71613 -38.96522 -38.30722 -35.77818 -35.23790 -33.47219 -32.66364 -30.21814 -29.96300 -29.43665 -27.48110 -25.77169 -22.99373 -22.98052 -22.62151 -21.88046 -20.66419 -18.46602 -18.29373 -17.51239 -16.59867 -16.43996 -16.31054 -16.15124 -15.90681 -15.58869 -15.37141 -15.07955 -14.57824 -14.11885 -13.92948 -13.44156 -13.37588 -13.30414 -12.96661 -12.68421 -12.61473 -12.27320 -12.08852 -12.00242 -11.82349 -11.61795 -11.28162 -11.12907 -11.05354 -10.84886 -10.69393 -10.49022 -10.08383 -9.90034 -9.54713 -9.15568 -8.75228 -8.39249 -8.28093 -7.56446 -5.99465 -4.04079 0.75064 0.77473 2.48276 2.76667 3.29303 3.31992 3.39307 3.42421 3.52476 3.77492 3.94534 3.96522 4.25804 4.48061 4.50290 4.59383 4.85526 4.92564 5.06907 5.18491 5.30452 5.34622 5.37445 5.52675 5.59268 5.63858 5.68139 5.76132 5.87285 5.89413 6.03293 6.06286 6.26143 6.31400 6.51171 6.60129 6.71553 7.13243 7.54072 7.62923 7.97353 8.03071 8.29523 8.50054 8.96438 9.18933 9.60870 11.08602 Molecular weight = 320.13amu Principal moments of inertia in cm(-1) A = 0.020283 B = 0.003201 C = 0.003167 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1380.108784 B = 8746.160654 C = 8839.601138 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C 0.107 3.893 3 N -0.599 5.599 4 C 0.247 3.753 5 C -0.523 4.523 6 H 0.057 0.943 7 C 0.059 3.941 8 N -0.894 5.894 9 Si 0.897 3.103 10 H -0.274 1.274 11 H -0.283 1.283 12 H -0.284 1.284 13 C 0.496 3.504 14 O -0.512 6.512 15 C -0.119 4.119 16 C -0.065 4.065 17 H 0.136 0.864 18 C -0.110 4.110 19 C -0.070 4.070 20 C -0.117 4.117 21 C -0.120 4.120 22 C 0.070 3.930 23 F -0.141 7.141 24 C 0.123 3.877 25 N -0.666 5.666 26 C 0.527 3.473 27 O -0.445 6.445 28 H 0.059 0.941 29 H 0.060 0.940 30 H 0.048 0.952 31 H 0.063 0.937 32 H 0.082 0.918 33 H 0.044 0.956 34 H 0.030 0.970 35 H 0.262 0.738 36 H 0.103 0.897 37 H 0.089 0.911 38 H 0.138 0.862 39 H 0.140 0.860 40 H 0.141 0.859 41 H 0.413 0.587 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.577 -10.260 -22.271 25.147 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.228 4.228 2 C -0.017 4.017 3 N -0.332 5.332 4 C 0.128 3.872 5 C -0.562 4.562 6 H 0.076 0.924 7 C -0.142 4.142 8 N -0.534 5.534 9 Si 0.725 3.275 10 H -0.198 1.198 11 H -0.209 1.209 12 H -0.210 1.210 13 C 0.281 3.719 14 O -0.388 6.388 15 C -0.160 4.160 16 C -0.086 4.086 17 H 0.153 0.847 18 C -0.113 4.113 19 C -0.089 4.089 20 C -0.136 4.136 21 C -0.139 4.139 22 C 0.048 3.952 23 F -0.120 7.120 24 C 0.024 3.976 25 N -0.311 5.311 26 C 0.312 3.688 27 O -0.313 6.313 28 H 0.078 0.922 29 H 0.080 0.920 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.100 0.900 33 H 0.062 0.938 34 H 0.048 0.952 35 H 0.072 0.928 36 H 0.121 0.879 37 H 0.108 0.892 38 H 0.156 0.844 39 H 0.157 0.843 40 H 0.159 0.841 41 H 0.251 0.749 Dipole moment (debyes) X Y Z Total from point charges -5.420 -8.998 -21.436 23.872 hybrid contribution 0.312 0.225 0.023 0.386 sum -5.108 -8.772 -21.413 23.697 Atomic orbital electron populations 1.22232 0.97047 1.01269 1.02259 1.21394 0.93337 0.84441 1.02552 1.48191 1.64300 1.13045 1.07654 1.19246 0.96097 0.93751 0.78079 1.21478 0.96952 1.31658 1.06137 0.92436 1.24947 0.97780 0.95006 0.96492 1.69952 1.35550 1.33544 1.14325 0.86457 0.84759 0.78003 0.78254 1.19828 1.20938 1.21044 1.20084 0.79710 0.87169 0.84899 1.90776 1.44338 1.16890 1.86746 1.21560 1.03822 0.98672 0.91906 1.20492 1.02625 0.93871 0.91648 0.84677 1.19823 0.97960 0.97228 0.96307 1.20428 0.99099 0.94438 0.94904 1.20921 0.97516 1.00527 0.94617 1.20903 0.97848 0.93978 1.01157 1.17013 0.93222 0.95289 0.89716 1.91491 1.61413 1.78954 1.80101 1.18159 0.97019 0.90715 0.91722 1.43909 1.40910 1.28023 1.18276 1.20505 0.81372 0.86501 0.80379 1.90960 1.64157 1.38175 1.37970 0.92229 0.92045 0.93314 0.91838 0.89972 0.93828 0.95227 0.92840 0.87889 0.89241 0.84381 0.84265 0.84079 0.74927 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.31 10.24 37.16 0.38 -1.93 16 2 C 0.11 1.68 5.93 -4.04 -0.02 1.66 16 3 N -0.60 -12.67 2.46 -175.05 -0.43 -13.10 16 4 C 0.25 6.58 5.17 -5.19 -0.03 6.56 16 5 C -0.52 -14.92 9.39 -34.44 -0.32 -15.25 16 6 H 0.06 1.62 7.81 -52.48 -0.41 1.21 16 7 C 0.06 1.72 5.46 -17.82 -0.10 1.62 16 8 N -0.89 -27.06 13.29 55.43 0.74 -26.32 16 9 Si 0.90 22.01 29.54 -169.99 -5.02 16.99 16 10 H -0.27 -6.56 7.11 56.52 0.40 -6.16 16 11 H -0.28 -6.98 7.11 56.52 0.40 -6.58 16 12 H -0.28 -6.79 7.11 56.52 0.40 -6.39 16 13 C 0.50 10.25 7.35 -10.98 -0.08 10.17 16 14 O -0.51 -13.05 13.19 -17.23 -0.23 -13.27 16 15 C -0.12 -1.67 3.79 -27.88 -0.11 -1.78 16 16 C -0.06 -0.88 2.63 -92.37 -0.24 -1.13 16 17 H 0.14 1.93 8.02 -51.93 -0.42 1.51 16 18 C -0.11 -1.14 5.67 -104.37 -0.59 -1.74 16 19 C -0.07 -0.53 10.03 -39.71 -0.40 -0.93 16 20 C -0.12 -0.72 10.06 -39.51 -0.40 -1.12 16 21 C -0.12 -0.85 9.99 -39.60 -0.40 -1.25 16 22 C 0.07 0.67 7.32 -39.13 -0.29 0.38 16 23 F -0.14 -1.44 17.27 2.25 0.04 -1.40 16 24 C 0.12 1.35 7.09 -83.59 -0.59 0.75 16 25 N -0.67 -8.24 5.89 -9.64 -0.06 -8.30 16 26 C 0.53 8.45 7.81 -10.83 -0.08 8.37 16 27 O -0.45 -9.39 15.54 -17.24 -0.27 -9.66 16 28 H 0.06 0.64 8.14 -51.93 -0.42 0.22 16 29 H 0.06 0.94 8.14 -51.93 -0.42 0.52 16 30 H 0.05 0.65 7.20 -51.93 -0.37 0.27 16 31 H 0.06 0.79 6.45 -51.93 -0.33 0.46 16 32 H 0.08 1.35 8.07 -51.93 -0.42 0.93 16 33 H 0.04 1.34 7.41 -51.93 -0.38 0.95 16 34 H 0.03 0.80 8.07 -51.93 -0.42 0.38 16 35 H 0.26 7.46 8.31 -40.82 -0.34 7.12 16 36 H 0.10 1.14 7.41 -51.93 -0.38 0.76 16 37 H 0.09 1.14 7.16 -51.93 -0.37 0.77 16 38 H 0.14 0.79 8.06 -52.49 -0.42 0.36 16 39 H 0.14 0.48 8.06 -52.49 -0.42 0.06 16 40 H 0.14 0.68 8.06 -52.48 -0.42 0.26 16 41 H 0.41 4.40 8.96 -40.82 -0.37 4.03 16 LS Contribution 351.77 15.07 5.30 5.30 Total: -1.00 -36.36 351.77 -8.32 -44.68 By element: Atomic # 1 Polarization: 5.81 SS G_CDS: -5.13 Total: 0.68 kcal Atomic # 6 Polarization: 7.67 SS G_CDS: -3.27 Total: 4.40 kcal Atomic # 7 Polarization: -47.97 SS G_CDS: 0.25 Total: -47.72 kcal Atomic # 8 Polarization: -22.43 SS G_CDS: -0.50 Total: -22.93 kcal Atomic # 9 Polarization: -1.44 SS G_CDS: 0.04 Total: -1.40 kcal Atomic # 14 Polarization: 22.01 SS G_CDS: -5.02 Total: 16.99 kcal Total LS contribution 5.30 Total: 5.30 kcal Total: -36.36 -8.32 -44.68 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000930464065.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.505 kcal (2) G-P(sol) polarization free energy of solvation -36.360 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.864 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.325 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.684 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.189 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.17 seconds