Wall clock time and date at job start Tue Mar 31 2020 12:44:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.53002 * 109.47476 * 2 1 4 4 C 1.53001 * 109.47195 * 120.00246 * 2 1 3 5 5 H 1.09004 * 109.47254 * 294.77398 * 4 2 1 6 6 N 1.46901 * 109.47042 * 54.77255 * 4 2 1 7 7 C 1.46903 * 111.00078 * 203.25262 * 6 4 2 8 8 C 1.52993 * 109.47280 * 180.11530 * 7 6 4 9 9 H 1.08997 * 109.47273 * 305.00165 * 8 7 6 10 10 C 1.47205 * 109.47253 * 64.99863 * 8 7 6 11 11 N 5.84296 * 98.03346 * 166.17626 * 2 1 3 12 12 C 1.52995 * 109.47431 * 184.99573 * 8 7 6 13 13 C 1.50702 * 109.47533 * 175.00086 * 12 8 7 14 14 H 1.07999 * 119.99457 * 359.97438 * 13 12 8 15 15 C 1.37876 * 120.00036 * 180.02562 * 13 12 8 16 16 N 1.31511 * 120.00349 * 359.97438 * 15 13 12 17 17 Si 1.86805 * 119.99822 * 180.02562 * 15 13 12 18 18 H 1.48497 * 109.46947 * 359.97438 * 17 15 13 19 19 H 1.48494 * 109.47384 * 119.99433 * 17 15 13 20 20 H 1.48507 * 109.46835 * 239.99576 * 17 15 13 21 21 C 1.50693 * 109.47337 * 174.77479 * 4 2 1 22 22 C 1.38245 * 119.99056 * 99.99979 * 21 4 2 23 23 C 1.38213 * 120.01631 * 179.97438 * 22 21 4 24 24 C 1.38345 * 119.98707 * 0.30475 * 23 22 21 25 25 Cl 1.73604 * 120.01333 * 179.70143 * 24 23 22 26 26 C 1.38353 * 119.97186 * 359.46108 * 24 23 22 27 27 C 1.38213 * 119.98663 * 0.51471 * 26 24 23 28 28 H 1.08998 * 109.46949 * 294.72377 * 1 2 3 29 29 H 1.09004 * 109.46800 * 54.71858 * 1 2 3 30 30 H 1.08995 * 109.47750 * 174.72262 * 1 2 3 31 31 H 1.08997 * 109.47166 * 239.99904 * 2 1 3 32 32 H 1.08998 * 109.47330 * 179.97438 * 3 2 1 33 33 H 1.08997 * 109.47316 * 299.99807 * 3 2 1 34 34 H 1.09006 * 109.46866 * 60.00367 * 3 2 1 35 35 H 1.00897 * 110.99857 * 79.30030 * 6 4 2 36 36 H 1.09002 * 109.46794 * 300.11650 * 7 6 4 37 37 H 1.09000 * 109.47218 * 60.11086 * 7 6 4 38 38 H 1.09001 * 109.47616 * 295.00464 * 12 8 7 39 39 H 1.09002 * 109.46960 * 55.00285 * 12 8 7 40 40 H 0.96997 * 120.00326 * 179.97438 * 16 15 13 41 41 H 1.08006 * 119.98561 * 0.02562 * 22 21 4 42 42 H 1.08001 * 120.00250 * 180.02562 * 23 22 21 43 43 H 1.08005 * 120.00677 * 180.26059 * 26 24 23 44 44 H 1.08004 * 119.99337 * 179.76756 * 27 26 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 1.2492 5 1 1.7551 -0.1563 2.1368 6 7 1.4500 -2.0651 1.3139 7 6 1.4460 -2.5725 2.6925 8 6 0.8282 -3.9719 2.7191 9 1 -0.1620 -3.9406 2.2646 10 6 1.6852 -4.9010 1.9646 11 7 2.3465 -5.6180 1.3824 12 6 0.7097 -4.4497 4.1677 13 6 -0.0097 -5.7734 4.2029 14 1 -0.3488 -6.2282 3.2839 15 6 -0.2358 -6.4033 5.4083 16 7 0.1768 -5.8493 6.5274 17 14 -1.1269 -8.0446 5.4518 18 1 -1.4840 -8.4507 4.0688 19 1 -0.2423 -9.0723 6.0571 20 1 -2.3633 -7.9151 6.2642 21 6 3.5413 -0.8344 1.1863 22 6 4.3313 0.0502 1.8967 23 6 5.7084 -0.0534 1.8397 24 6 6.2964 -1.0385 1.0666 25 17 8.0261 -1.1643 0.9884 26 6 5.5052 -1.9265 0.3596 27 6 4.1283 -1.8223 0.4178 28 1 -0.3633 0.4298 0.9335 29 1 -0.3633 0.5936 -0.8390 30 1 -0.3634 -1.0232 -0.0945 31 1 1.8933 -0.5138 -0.8899 32 1 3.1300 1.4425 0.0005 33 1 1.6768 1.9563 -0.8900 34 1 1.6768 1.9563 0.8901 35 1 1.9309 -2.7012 0.6959 36 1 2.4692 -2.6199 3.0651 37 1 0.8600 -1.9045 3.3238 38 1 1.7058 -4.5661 4.5947 39 1 0.1494 -3.7162 4.7475 40 1 0.0174 -6.2922 7.3755 41 1 3.8722 0.8217 2.4970 42 1 6.3253 0.6375 2.3952 43 1 5.9636 -2.6984 -0.2408 44 1 3.5106 -2.5131 -0.1370 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000356114119.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:44:19 Heat of formation + Delta-G solvation = 17.905451 kcal Electronic energy + Delta-G solvation = -24219.233095 eV Core-core repulsion = 20775.228494 eV Total energy + Delta-G solvation = -3444.004601 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 320.135 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -40.18225 -37.80294 -36.73543 -36.14827 -34.30639 -33.24604 -31.67386 -31.31086 -30.33565 -27.17874 -26.77889 -24.95942 -23.42031 -22.47608 -21.84763 -21.68958 -19.87507 -17.64262 -16.73733 -16.53798 -15.97477 -15.73219 -15.28934 -14.88638 -14.57187 -14.40089 -14.14628 -13.72463 -13.49554 -13.21065 -13.09175 -12.78088 -12.73320 -12.38035 -12.20435 -12.14466 -11.94080 -11.87709 -11.65298 -11.55591 -11.28409 -11.08871 -11.01826 -10.96177 -10.87504 -10.74460 -10.68820 -10.49772 -10.28676 -9.57269 -9.25128 -9.23055 -8.76060 -8.47481 -8.42000 -6.10776 -4.13893 0.91318 1.07754 1.93479 3.27615 3.35981 3.39317 3.40467 3.54572 3.59576 4.10940 4.40747 4.42967 4.56145 4.65715 4.76988 4.90673 4.93772 5.09175 5.15996 5.21647 5.27445 5.37758 5.49479 5.52916 5.56700 5.65848 5.70293 5.75306 5.81712 5.90154 6.00532 6.02659 6.04071 6.12536 6.19440 6.23917 6.40337 6.45404 6.52590 6.57398 7.04185 7.34054 7.42200 7.51632 7.84348 8.21701 8.37620 8.90907 9.51777 11.00122 Molecular weight = 320.14amu Principal moments of inertia in cm(-1) A = 0.012045 B = 0.003281 C = 0.002814 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2324.023329 B = 8532.604912 C = 9946.189895 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.079 4.079 3 C -0.149 4.149 4 C 0.129 3.871 5 H 0.092 0.908 6 N -0.679 5.679 7 C 0.066 3.934 8 C 0.007 3.993 9 H 0.111 0.889 10 C 0.240 3.760 11 N -0.475 5.475 12 C 0.033 3.967 13 C -0.526 4.526 14 H 0.057 0.943 15 C 0.062 3.938 16 N -0.891 5.891 17 Si 0.891 3.109 18 H -0.272 1.272 19 H -0.284 1.284 20 H -0.282 1.282 21 C -0.100 4.100 22 C -0.099 4.099 23 C -0.109 4.109 24 C -0.038 4.038 25 Cl -0.076 7.076 26 C -0.103 4.103 27 C -0.103 4.103 28 H 0.052 0.948 29 H 0.044 0.956 30 H 0.071 0.929 31 H 0.067 0.933 32 H 0.054 0.946 33 H 0.054 0.946 34 H 0.055 0.945 35 H 0.338 0.662 36 H 0.036 0.964 37 H 0.092 0.908 38 H 0.024 0.976 39 H 0.040 0.960 40 H 0.262 0.738 41 H 0.132 0.868 42 H 0.132 0.868 43 H 0.132 0.868 44 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.288 17.548 -11.583 22.253 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.192 4.192 2 C -0.098 4.098 3 C -0.207 4.207 4 C 0.018 3.982 5 H 0.110 0.890 6 N -0.309 5.309 7 C -0.064 4.064 8 C -0.015 4.015 9 H 0.129 0.871 10 C -0.077 4.077 11 N -0.152 5.152 12 C -0.006 4.006 13 C -0.564 4.564 14 H 0.075 0.925 15 C -0.140 4.140 16 N -0.530 5.530 17 Si 0.718 3.282 18 H -0.197 1.197 19 H -0.210 1.210 20 H -0.208 1.208 21 C -0.102 4.102 22 C -0.117 4.117 23 C -0.127 4.127 24 C -0.065 4.065 25 Cl -0.047 7.047 26 C -0.122 4.122 27 C -0.122 4.122 28 H 0.071 0.929 29 H 0.063 0.937 30 H 0.090 0.910 31 H 0.085 0.915 32 H 0.073 0.927 33 H 0.073 0.927 34 H 0.074 0.926 35 H 0.158 0.842 36 H 0.054 0.946 37 H 0.111 0.889 38 H 0.042 0.958 39 H 0.058 0.942 40 H 0.071 0.929 41 H 0.150 0.850 42 H 0.150 0.850 43 H 0.150 0.850 44 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 7.772 16.637 -12.249 22.073 hybrid contribution 0.535 -1.059 0.587 1.324 sum 8.307 15.578 -11.662 21.158 Atomic orbital electron populations 1.21676 0.93915 1.02819 1.00818 1.21052 0.96839 0.95137 0.96731 1.21881 1.01042 0.95977 1.01777 1.20744 0.86138 0.91697 0.99593 0.88985 1.60822 1.57903 1.02917 1.09268 1.22128 0.99901 0.95279 0.89056 1.19328 0.95728 0.87840 0.98617 0.87112 1.29331 0.93030 0.93451 0.91855 1.81035 1.11487 1.10234 1.12477 1.19158 0.98320 0.97000 0.86120 1.21176 1.37320 1.04925 0.92955 0.92459 1.24950 0.95631 0.97724 0.95655 1.69943 1.46356 1.38915 0.97772 0.86548 0.79480 0.83900 0.78231 1.19668 1.21007 1.20815 1.20887 0.97914 0.95158 0.96227 1.21019 0.92497 0.99078 0.99139 1.21046 0.95227 0.97801 0.98675 1.20920 0.84421 0.99296 1.01821 1.98368 1.11031 1.97766 1.97568 1.21027 0.93455 0.98436 0.99303 1.20916 0.94006 0.98278 0.98993 0.92899 0.93733 0.91022 0.91467 0.92730 0.92658 0.92591 0.84156 0.94592 0.88946 0.95809 0.94221 0.92851 0.85001 0.85023 0.85033 0.85346 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -1.23 8.88 37.15 0.33 -0.90 16 2 C -0.08 -0.70 2.66 -90.62 -0.24 -0.94 16 3 C -0.15 -1.15 8.91 37.16 0.33 -0.82 16 4 C 0.13 1.28 1.81 -68.87 -0.12 1.15 16 5 H 0.09 0.89 7.69 -51.93 -0.40 0.49 16 6 N -0.68 -8.07 5.34 -107.95 -0.58 -8.64 16 7 C 0.07 0.93 4.92 -3.83 -0.02 0.91 16 8 C 0.01 0.12 2.42 -93.41 -0.23 -0.10 16 9 H 0.11 1.88 8.14 -51.93 -0.42 1.46 16 10 C 0.24 4.73 12.98 -20.76 -0.27 4.46 16 11 N -0.48 -10.09 18.54 42.15 0.78 -9.31 16 12 C 0.03 0.74 4.42 -27.88 -0.12 0.62 16 13 C -0.53 -13.86 8.60 -34.44 -0.30 -14.16 16 14 H 0.06 1.51 7.59 -52.49 -0.40 1.11 16 15 C 0.06 1.71 5.46 -17.82 -0.10 1.61 16 16 N -0.89 -25.39 13.29 55.43 0.74 -24.66 16 17 Si 0.89 21.23 29.54 -169.99 -5.02 16.21 16 18 H -0.27 -6.44 7.11 56.52 0.40 -6.03 16 19 H -0.28 -6.81 7.11 56.52 0.40 -6.40 16 20 H -0.28 -6.59 7.11 56.52 0.40 -6.19 16 21 C -0.10 -1.04 3.91 -104.62 -0.41 -1.45 16 22 C -0.10 -0.95 8.76 -39.59 -0.35 -1.29 16 23 C -0.11 -1.08 9.83 -39.55 -0.39 -1.47 16 24 C -0.04 -0.42 6.32 -39.50 -0.25 -0.67 16 25 Cl -0.08 -0.81 28.96 -51.86 -1.50 -2.31 16 26 C -0.10 -1.17 9.83 -39.55 -0.39 -1.56 16 27 C -0.10 -1.16 9.14 -39.59 -0.36 -1.52 16 28 H 0.05 0.48 8.14 -51.93 -0.42 0.06 16 29 H 0.04 0.36 8.14 -51.93 -0.42 -0.06 16 30 H 0.07 0.74 7.66 -51.93 -0.40 0.34 16 31 H 0.07 0.64 8.14 -51.93 -0.42 0.21 16 32 H 0.05 0.44 6.76 -51.93 -0.35 0.09 16 33 H 0.05 0.40 8.14 -51.93 -0.42 -0.02 16 34 H 0.05 0.40 8.14 -51.93 -0.42 -0.02 16 35 H 0.34 4.27 5.47 -39.29 -0.21 4.05 16 36 H 0.04 0.54 7.93 -51.93 -0.41 0.13 16 37 H 0.09 1.20 8.06 -51.93 -0.42 0.78 16 38 H 0.02 0.59 8.14 -51.93 -0.42 0.17 16 39 H 0.04 0.91 8.14 -51.93 -0.42 0.49 16 40 H 0.26 7.08 8.31 -40.82 -0.34 6.74 16 41 H 0.13 1.00 8.04 -52.48 -0.42 0.58 16 42 H 0.13 1.08 8.06 -52.49 -0.42 0.66 16 43 H 0.13 1.37 8.06 -52.48 -0.42 0.95 16 44 H 0.13 1.43 6.50 -52.48 -0.34 1.08 16 LS Contribution 381.07 15.07 5.74 5.74 Total: -1.00 -29.00 381.07 -9.44 -38.44 By element: Atomic # 1 Polarization: 7.38 SS G_CDS: -6.72 Total: 0.66 kcal Atomic # 6 Polarization: -13.25 SS G_CDS: -2.88 Total: -16.13 kcal Atomic # 7 Polarization: -43.55 SS G_CDS: 0.94 Total: -42.61 kcal Atomic # 14 Polarization: 21.23 SS G_CDS: -5.02 Total: 16.21 kcal Atomic # 17 Polarization: -0.81 SS G_CDS: -1.50 Total: -2.31 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -29.00 -9.44 -38.44 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000356114119.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 56.342 kcal (2) G-P(sol) polarization free energy of solvation -29.002 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.341 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.435 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.437 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.905 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds