Wall clock time and date at job start Tue Mar 31 2020 12:55:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 H 1.08994 * 110.64177 * 2 1 4 4 C 1.55159 * 110.71738 * 123.14101 * 2 1 3 5 5 C 1.55389 * 101.36541 * 153.94939 * 4 2 1 6 6 N 1.47423 * 104.86959 * 323.01347 * 5 4 2 7 7 C 1.34784 * 125.64782 * 204.09476 * 6 5 4 8 8 O 1.21581 * 120.00010 * 180.02562 * 7 6 5 9 9 N 1.34777 * 119.99847 * 0.04725 * 7 6 5 10 10 C 1.39945 * 119.99843 * 174.73404 * 9 7 6 11 11 C 1.38955 * 120.03632 * 326.15183 * 10 9 7 12 12 C 1.38162 * 120.06651 * 179.76714 * 11 10 9 13 13 C 1.38168 * 120.13711 * 0.51129 * 12 11 10 14 14 C 1.38908 * 120.06795 * 359.74781 * 13 12 11 15 15 O 1.35758 * 120.03157 * 180.02562 * 14 13 12 16 16 C 1.34832 * 116.99608 * 185.88511 * 15 14 13 17 17 H 1.07995 * 120.00314 * 5.40644 * 16 15 14 18 18 C 1.38657 * 119.99674 * 185.40478 * 16 15 14 19 19 N 1.31564 * 119.99758 * 0.02562 * 18 16 15 20 20 Si 1.86793 * 119.99923 * 180.02562 * 18 16 15 21 21 H 1.48500 * 109.47201 * 90.00355 * 20 18 16 22 22 H 1.48509 * 109.47036 * 209.99907 * 20 18 16 23 23 H 1.48499 * 109.47296 * 329.99864 * 20 18 16 24 24 C 1.38702 * 120.03247 * 146.43182 * 10 9 7 25 25 C 1.47015 * 108.70735 * 24.13545 * 6 5 4 26 26 H 1.08995 * 109.88731 * 239.52046 * 25 6 5 27 27 C 1.53006 * 110.01493 * 118.42515 * 25 6 5 28 28 O 1.42907 * 109.46646 * 67.11635 * 27 25 6 29 29 H 1.08993 * 109.47177 * 180.70270 * 1 2 3 30 30 H 1.09000 * 109.47142 * 300.70521 * 1 2 3 31 31 H 1.08997 * 109.46502 * 60.70078 * 1 2 3 32 32 H 1.09002 * 111.00290 * 272.11811 * 4 2 1 33 33 H 1.08998 * 111.00448 * 35.96698 * 4 2 1 34 34 H 1.09004 * 110.34079 * 204.16760 * 5 4 2 35 35 H 1.08997 * 110.44470 * 81.91437 * 5 4 2 36 36 H 0.97001 * 119.99746 * 354.73539 * 9 7 6 37 37 H 1.08003 * 119.96478 * 0.02839 * 11 10 9 38 38 H 1.08003 * 119.93133 * 180.23592 * 12 11 10 39 39 H 1.07999 * 119.96494 * 179.72218 * 13 12 11 40 40 H 0.97002 * 119.99705 * 180.02562 * 19 18 16 41 41 H 1.08005 * 120.07224 * 359.95394 * 24 10 9 42 42 H 1.09000 * 109.47242 * 187.11372 * 27 25 6 43 43 H 1.09004 * 109.47088 * 307.12090 * 27 25 6 44 44 H 0.96699 * 113.99468 * 179.97438 * 28 27 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.9143 1.0200 0.0000 4 6 2.0789 -0.7934 1.2152 5 6 3.4674 -1.2455 0.6838 6 7 3.2471 -1.5462 -0.7425 7 6 3.9957 -2.3768 -1.4950 8 8 3.7206 -2.5500 -2.6665 9 7 5.0492 -3.0158 -0.9486 10 6 5.7594 -3.9609 -1.6973 11 6 5.0955 -4.7560 -2.6235 12 6 5.7969 -5.6860 -3.3664 13 6 7.1582 -5.8359 -3.1837 14 6 7.8267 -5.0477 -2.2555 15 8 9.1644 -5.1952 -2.0769 16 6 9.7302 -4.4881 -1.0780 17 1 9.1114 -3.9094 -0.4083 18 6 11.1065 -4.5041 -0.9105 19 7 11.8603 -5.2088 -1.7266 20 14 11.8903 -3.5251 0.4739 21 1 11.9819 -4.3730 1.6895 22 1 13.2521 -3.0950 0.0666 23 1 11.0601 -2.3290 0.7660 24 6 7.1260 -4.1090 -1.5115 25 6 2.0761 -0.7892 -1.2085 26 1 1.3141 -1.4754 -1.5780 27 6 2.4868 0.1792 -2.3197 28 8 2.8811 -0.5623 -3.4759 29 1 -0.3633 -1.0275 0.0126 30 1 -0.3633 0.5247 0.8836 31 1 -0.3632 0.5029 -0.8962 32 1 2.1820 -0.1490 2.0882 33 1 1.4468 -1.6529 1.4384 34 1 3.8031 -2.1379 1.2122 35 1 4.1969 -0.4432 0.7941 36 1 5.3149 -2.8205 -0.0363 37 1 4.0307 -4.6440 -2.7657 38 1 5.2793 -6.3002 -4.0884 39 1 7.7030 -6.5668 -3.7628 40 1 12.8231 -5.2202 -1.6092 41 1 7.6437 -3.4948 -0.7895 42 1 1.6437 0.8227 -2.5708 43 1 3.3219 0.7909 -1.9782 44 1 3.1546 -0.0113 -4.2220 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000277074485.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:55:21 Heat of formation + Delta-G solvation = -65.785613 kcal Electronic energy + Delta-G solvation = -27128.229561 eV Core-core repulsion = 23239.886678 eV Total energy + Delta-G solvation = -3888.342882 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 320.157 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -40.62803 -39.14870 -38.05346 -36.24406 -36.18372 -34.05640 -33.01403 -32.15462 -30.51255 -29.30390 -28.58846 -27.50458 -25.24168 -24.16650 -23.25516 -21.69799 -21.64602 -20.54689 -19.41727 -18.25612 -17.77847 -17.20519 -16.99076 -16.69982 -15.44897 -15.08796 -15.02249 -14.73518 -14.48677 -14.23741 -14.05840 -13.84678 -13.65209 -13.55742 -13.39618 -12.96126 -12.87090 -12.48905 -12.24623 -12.14801 -11.84430 -11.67726 -11.44027 -11.29612 -11.16189 -11.07906 -11.03854 -10.82849 -10.72546 -10.42360 -9.93593 -9.72818 -9.50690 -9.32627 -8.74981 -8.60802 -7.59018 -7.03475 -6.39998 -3.99305 2.17662 2.49096 2.65441 3.13787 3.14408 3.19107 3.53197 3.88253 3.99358 4.04000 4.17233 4.36842 4.64987 4.70922 4.87484 4.94917 5.06604 5.07760 5.15645 5.16639 5.23006 5.25631 5.35755 5.36738 5.54191 5.58040 5.69065 5.72350 5.77749 5.95901 6.10671 6.14173 6.20679 6.38662 6.42569 6.70924 6.97489 7.10842 7.20970 7.38280 7.45046 7.51554 7.75580 7.93474 8.04912 8.16486 8.89569 9.05627 9.77873 10.78435 Molecular weight = 320.16amu Principal moments of inertia in cm(-1) A = 0.015950 B = 0.003188 C = 0.002852 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1755.117942 B = 8779.951185 C = 9816.730659 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C -0.099 4.099 3 H 0.087 0.913 4 C -0.125 4.125 5 C 0.093 3.907 6 N -0.634 5.634 7 C 0.713 3.287 8 O -0.526 6.526 9 N -0.685 5.685 10 C 0.204 3.796 11 C -0.204 4.204 12 C -0.062 4.062 13 C -0.205 4.205 14 C 0.170 3.830 15 O -0.178 6.178 16 C -0.390 4.390 17 H 0.089 0.911 18 C 0.038 3.962 19 N -0.864 5.864 20 Si 0.940 3.060 21 H -0.274 1.274 22 H -0.278 1.278 23 H -0.269 1.269 24 C -0.259 4.259 25 C 0.163 3.837 26 H 0.081 0.919 27 C 0.064 3.936 28 O -0.531 6.531 29 H 0.060 0.940 30 H 0.062 0.938 31 H 0.059 0.941 32 H 0.085 0.915 33 H 0.079 0.921 34 H 0.074 0.926 35 H 0.067 0.933 36 H 0.398 0.602 37 H 0.119 0.881 38 H 0.115 0.885 39 H 0.117 0.883 40 H 0.269 0.731 41 H 0.128 0.872 42 H 0.046 0.954 43 H 0.040 0.960 44 H 0.365 0.635 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -20.786 12.332 6.583 25.050 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 C -0.118 4.118 3 H 0.105 0.895 4 C -0.163 4.163 5 C -0.030 4.030 6 N -0.374 5.374 7 C 0.415 3.585 8 O -0.398 6.398 9 N -0.333 5.333 10 C 0.110 3.890 11 C -0.225 4.225 12 C -0.081 4.081 13 C -0.224 4.224 14 C 0.116 3.884 15 O -0.082 6.082 16 C -0.466 4.466 17 H 0.106 0.894 18 C -0.166 4.166 19 N -0.499 5.499 20 Si 0.765 3.235 21 H -0.199 1.199 22 H -0.203 1.203 23 H -0.194 1.194 24 C -0.281 4.281 25 C 0.058 3.942 26 H 0.099 0.901 27 C -0.016 4.016 28 O -0.333 6.333 29 H 0.079 0.921 30 H 0.081 0.919 31 H 0.078 0.922 32 H 0.104 0.896 33 H 0.098 0.902 34 H 0.093 0.907 35 H 0.085 0.915 36 H 0.232 0.768 37 H 0.137 0.863 38 H 0.133 0.867 39 H 0.135 0.865 40 H 0.079 0.921 41 H 0.145 0.855 42 H 0.064 0.936 43 H 0.059 0.941 44 H 0.210 0.790 Dipole moment (debyes) X Y Z Total from point charges -20.706 11.467 5.893 24.392 hybrid contribution 0.776 1.352 0.962 1.832 sum -19.931 12.819 6.855 24.669 Atomic orbital electron populations 1.21770 0.93420 1.02534 1.02235 1.22197 0.96551 0.99386 0.93662 0.89511 1.22918 0.95626 1.00403 0.97353 1.22389 0.97775 1.00759 0.82087 1.47604 1.31575 1.47913 1.10320 1.15425 0.79760 0.78786 0.84534 1.91033 1.70684 1.64901 1.13164 1.42663 1.31366 1.42491 1.16765 1.17173 0.89600 0.88542 0.93682 1.20568 0.99876 0.99760 1.02261 1.20517 0.93057 0.96838 0.97695 1.20217 0.94122 1.04397 1.03713 1.19057 0.85127 0.91878 0.92369 1.84022 1.15044 1.60140 1.48990 1.21252 0.90710 1.28353 1.06319 0.89362 1.25262 0.95174 0.97477 0.98642 1.70043 1.05528 1.38202 1.36161 0.85741 0.78722 0.79298 0.79787 1.19938 1.20305 1.19374 1.20766 0.92001 1.06376 1.08997 1.21440 0.87409 0.92533 0.92769 0.90138 1.22539 0.97788 0.93459 0.87780 1.87020 1.88228 1.34866 1.23230 0.92091 0.91874 0.92194 0.89624 0.90217 0.90738 0.91524 0.76770 0.86275 0.86737 0.86499 0.92108 0.85480 0.93561 0.94142 0.78972 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -0.75 9.13 37.16 0.34 -0.42 16 2 C -0.10 -0.66 3.06 -88.78 -0.27 -0.93 16 3 H 0.09 0.50 7.85 -51.93 -0.41 0.09 16 4 C -0.12 -0.78 6.57 -24.32 -0.16 -0.94 16 5 C 0.09 0.81 6.55 -2.27 -0.01 0.80 16 6 N -0.63 -8.00 3.07 -168.39 -0.52 -8.52 16 7 C 0.71 12.18 7.97 -86.91 -0.69 11.48 16 8 O -0.53 -10.83 11.36 -18.75 -0.21 -11.04 16 9 N -0.69 -11.62 5.29 -14.24 -0.08 -11.69 16 10 C 0.20 4.19 6.27 -83.72 -0.52 3.66 16 11 C -0.20 -4.19 8.65 -39.34 -0.34 -4.53 16 12 C -0.06 -1.24 10.03 -39.64 -0.40 -1.64 16 13 C -0.20 -4.59 9.99 -39.36 -0.39 -4.98 16 14 C 0.17 4.26 6.64 -39.13 -0.26 4.00 16 15 O -0.18 -5.19 9.76 0.02 0.00 -5.19 16 16 C -0.39 -11.01 9.44 30.89 0.29 -10.72 16 17 H 0.09 2.30 5.30 -52.49 -0.28 2.02 16 18 C 0.04 1.06 5.49 -17.51 -0.10 0.97 16 19 N -0.86 -25.65 13.67 55.48 0.76 -24.90 16 20 Si 0.94 20.61 29.55 -169.99 -5.02 15.59 16 21 H -0.27 -5.83 7.11 56.52 0.40 -5.43 16 22 H -0.28 -5.99 7.11 56.52 0.40 -5.59 16 23 H -0.27 -5.65 7.11 56.52 0.40 -5.25 16 24 C -0.26 -5.89 9.04 -39.21 -0.35 -6.24 16 25 C 0.16 1.73 2.88 -66.95 -0.19 1.54 16 26 H 0.08 0.98 7.82 -51.93 -0.41 0.58 16 27 C 0.06 0.68 6.47 37.16 0.24 0.92 16 28 O -0.53 -7.57 10.38 -59.28 -0.62 -8.19 16 29 H 0.06 0.35 8.14 -51.93 -0.42 -0.07 16 30 H 0.06 0.26 8.14 -51.93 -0.42 -0.16 16 31 H 0.06 0.30 8.14 -51.93 -0.42 -0.12 16 32 H 0.09 0.37 8.14 -51.93 -0.42 -0.05 16 33 H 0.08 0.50 8.05 -51.93 -0.42 0.09 16 34 H 0.07 0.61 7.38 -51.93 -0.38 0.23 16 35 H 0.07 0.54 8.14 -51.93 -0.42 0.11 16 36 H 0.40 5.56 7.36 -40.82 -0.30 5.26 16 37 H 0.12 2.46 6.45 -52.48 -0.34 2.12 16 38 H 0.11 1.92 8.06 -52.48 -0.42 1.50 16 39 H 0.12 2.50 8.06 -52.49 -0.42 2.07 16 40 H 0.27 7.32 8.31 -40.82 -0.34 6.98 16 41 H 0.13 2.84 5.71 -52.48 -0.30 2.54 16 42 H 0.05 0.38 8.14 -51.93 -0.42 -0.05 16 43 H 0.04 0.43 8.14 -51.93 -0.42 0.01 16 44 H 0.37 3.77 9.12 45.56 0.42 4.18 16 LS Contribution 359.03 15.07 5.41 5.41 Total: -1.00 -36.02 359.03 -8.46 -44.47 By element: Atomic # 1 Polarization: 16.43 SS G_CDS: -5.36 Total: 11.08 kcal Atomic # 6 Polarization: -4.19 SS G_CDS: -2.83 Total: -7.02 kcal Atomic # 7 Polarization: -45.28 SS G_CDS: 0.17 Total: -45.11 kcal Atomic # 8 Polarization: -23.59 SS G_CDS: -0.83 Total: -24.42 kcal Atomic # 14 Polarization: 20.61 SS G_CDS: -5.02 Total: 15.59 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -36.02 -8.46 -44.47 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000277074485.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.311 kcal (2) G-P(sol) polarization free energy of solvation -36.017 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.328 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.457 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.474 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.786 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds