Wall clock time and date at job start Tue Mar 31 2020 13:42:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 N 1.30642 * 128.64509 * 2 1 4 4 O 1.20833 * 109.62564 * 180.23891 * 3 2 1 5 5 N 1.20907 * 115.90613 * 359.73750 * 4 3 2 6 6 C 1.31603 * 109.17693 * 359.97438 * 5 4 3 7 7 C 1.48279 * 128.71266 * 179.97438 * 6 5 4 8 8 O 1.21500 * 120.00075 * 180.02562 * 7 6 5 9 9 N 1.34773 * 119.99827 * 0.03336 * 7 6 5 10 10 C 1.48112 * 127.84230 * 179.97438 * 9 7 6 11 11 C 1.54315 * 104.71486 * 140.22256 * 10 9 7 12 12 C 1.53004 * 112.07686 * 146.94091 * 11 10 9 13 13 C 1.53757 * 109.08329 * 271.63934 * 11 10 9 14 14 N 1.47200 * 106.40470 * 94.28403 * 13 11 10 15 15 C 1.36943 * 126.70374 * 211.29542 * 14 13 11 16 16 H 1.08003 * 119.99648 * 165.69720 * 15 14 13 17 17 C 1.38804 * 119.99839 * 345.69736 * 15 14 13 18 18 N 1.31622 * 120.00247 * 350.70109 * 17 15 14 19 19 Si 1.86810 * 119.99877 * 170.70063 * 17 15 14 20 20 H 1.48493 * 109.47005 * 90.00021 * 19 17 15 21 21 H 1.48501 * 109.47040 * 209.99959 * 19 17 15 22 22 H 1.48500 * 109.46752 * 329.99813 * 19 17 15 23 23 C 1.47206 * 106.59316 * 31.56290 * 14 13 11 24 24 C 1.54032 * 106.26666 * 328.37046 * 23 14 13 25 25 C 1.52994 * 112.77347 * 141.67274 * 24 23 14 26 26 C 1.48108 * 127.84708 * 359.97438 * 9 7 6 27 27 H 1.08999 * 109.47535 * 270.16257 * 1 2 3 28 28 H 1.08999 * 109.47285 * 30.16082 * 1 2 3 29 29 H 1.09003 * 109.47557 * 150.16405 * 1 2 3 30 30 H 1.08998 * 110.39177 * 21.41338 * 10 9 7 31 31 H 1.09000 * 110.38972 * 259.02464 * 10 9 7 32 32 H 1.09001 * 109.46886 * 182.01000 * 12 11 10 33 33 H 1.08996 * 109.47143 * 302.01060 * 12 11 10 34 34 H 1.08997 * 109.46772 * 62.01513 * 12 11 10 35 35 H 1.09008 * 110.06527 * 335.05529 * 13 11 10 36 36 H 1.09000 * 110.07683 * 213.52638 * 13 11 10 37 37 H 0.97001 * 120.00021 * 180.02562 * 18 17 15 38 38 H 1.09005 * 110.06738 * 87.68752 * 23 14 13 39 39 H 1.09000 * 110.06826 * 209.20691 * 23 14 13 40 40 H 1.08997 * 109.47368 * 301.38776 * 25 24 23 41 41 H 1.09006 * 109.46616 * 61.38295 * 25 24 23 42 42 H 1.08997 * 109.47115 * 181.37965 * 25 24 23 43 43 H 1.09003 * 110.39187 * 338.59526 * 26 9 7 44 44 H 1.09002 * 110.39119 * 100.86048 * 26 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 7 2.3228 1.0203 0.0000 4 8 3.4651 0.6266 -0.0047 5 7 3.6101 -0.5738 -0.0034 6 6 2.4279 -1.1520 0.0038 7 6 2.1033 -2.5988 0.0076 8 8 0.9436 -2.9612 0.0138 9 7 3.0946 -3.5119 0.0042 10 6 2.9705 -4.9878 0.0075 11 6 4.0758 -5.4762 -0.9522 12 6 4.6574 -6.8241 -0.5210 13 6 3.5156 -5.5201 -2.3834 14 7 3.8698 -4.2353 -3.0082 15 6 3.1537 -3.5647 -3.9636 16 1 3.3811 -2.5320 -4.1832 17 6 2.1356 -4.2124 -4.6498 18 7 1.9766 -5.5123 -4.5182 19 14 0.9913 -3.2390 -5.7601 20 1 1.5527 -3.1963 -7.1341 21 1 -0.3424 -3.8915 -5.7904 22 1 0.8537 -1.8556 -5.2382 23 6 5.1475 -3.8151 -2.4100 24 6 5.1464 -4.3543 -0.9671 25 6 6.5202 -4.8608 -0.5232 26 6 4.5553 -3.2673 -0.0038 27 1 -0.3634 0.0029 1.0276 28 1 -0.3634 0.8885 -0.5163 29 1 -0.3634 -0.8914 -0.5113 30 1 1.9890 -5.2872 -0.3599 31 1 3.1377 -5.3807 1.0104 32 1 5.4558 -7.1109 -1.2055 33 1 5.0576 -6.7406 0.4894 34 1 3.8733 -7.5809 -0.5400 35 1 2.4321 -5.6373 -2.3575 36 1 3.9680 -6.3427 -2.9373 37 1 1.2653 -5.9649 -4.9980 38 1 5.9805 -4.2401 -2.9701 39 1 5.2174 -2.7273 -2.4028 40 1 6.8503 -5.6526 -1.1955 41 1 7.2362 -4.0394 -0.5500 42 1 6.4528 -5.2509 0.4923 43 1 4.7709 -2.2670 -0.3796 44 1 4.9668 -3.3926 0.9978 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000982849893.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:42:13 Heat of formation + Delta-G solvation = 119.142605 kcal Electronic energy + Delta-G solvation = -29260.159362 eV Core-core repulsion = 25412.128321 eV Total energy + Delta-G solvation = -3848.031042 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 320.164 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -46.77448 -40.38192 -38.42695 -35.19688 -34.85632 -34.44965 -33.02203 -31.69145 -30.71760 -29.49526 -27.32164 -26.27292 -25.80306 -25.00438 -24.61479 -22.56325 -22.11306 -20.08467 -19.95955 -18.96132 -18.07743 -17.49983 -17.05323 -16.45083 -15.66254 -15.57281 -14.66303 -14.18600 -14.08539 -13.89911 -13.62564 -13.51937 -13.51020 -13.27202 -13.20370 -12.82458 -12.30087 -12.23344 -11.93598 -11.92165 -11.60257 -11.55966 -11.40904 -11.38199 -11.05921 -10.84487 -10.81203 -10.65375 -10.25009 -10.10209 -10.07810 -10.03195 -9.83720 -9.73433 -9.56027 -8.70681 -8.37768 -6.79902 -5.77923 -3.10248 0.91330 1.38116 2.70274 3.24819 3.38061 3.44202 3.45516 3.45616 3.54870 3.94249 4.47777 4.66584 4.73157 4.79493 4.97680 5.13904 5.18936 5.38369 5.41459 5.42286 5.52695 5.57234 5.58224 5.69459 5.77900 5.87986 5.93933 5.99117 6.00850 6.05946 6.09180 6.25130 6.29381 6.39344 6.41952 6.52188 6.65625 6.80482 6.87891 7.36896 7.55403 7.68637 7.73926 8.16524 8.25289 8.54104 9.16291 9.78616 10.50610 11.36026 Molecular weight = 320.16amu Principal moments of inertia in cm(-1) A = 0.009633 B = 0.007230 C = 0.005073 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2905.892214 B = 3871.724210 C = 5518.612259 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 C 0.060 3.940 3 N -0.362 5.362 4 O 0.333 5.667 5 N -0.319 5.319 6 C -0.023 4.023 7 C 0.630 3.370 8 O -0.518 6.518 9 N -0.586 5.586 10 C 0.128 3.872 11 C -0.101 4.101 12 C -0.122 4.122 13 C 0.181 3.819 14 N -0.589 5.589 15 C -0.226 4.226 16 H 0.070 0.930 17 C -0.001 4.001 18 N -0.913 5.913 19 Si 0.905 3.095 20 H -0.288 1.288 21 H -0.288 1.288 22 H -0.282 1.282 23 C 0.145 3.855 24 C -0.084 4.084 25 C -0.122 4.122 26 C 0.107 3.893 27 H 0.091 0.909 28 H 0.085 0.915 29 H 0.103 0.897 30 H 0.087 0.913 31 H 0.065 0.935 32 H 0.061 0.939 33 H 0.051 0.949 34 H 0.055 0.945 35 H 0.076 0.924 36 H 0.024 0.976 37 H 0.253 0.747 38 H 0.020 0.980 39 H 0.039 0.961 40 H 0.063 0.937 41 H 0.053 0.947 42 H 0.055 0.945 43 H 0.092 0.908 44 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.471 4.170 12.878 14.256 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C -0.106 4.106 3 N -0.089 5.089 4 O 0.111 5.889 5 N -0.042 5.042 6 C -0.189 4.189 7 C 0.414 3.586 8 O -0.392 6.392 9 N -0.317 5.317 10 C 0.007 3.993 11 C -0.103 4.103 12 C -0.180 4.180 13 C 0.055 3.945 14 N -0.313 5.313 15 C -0.354 4.354 16 H 0.087 0.913 17 C -0.198 4.198 18 N -0.559 5.559 19 Si 0.735 3.265 20 H -0.215 1.215 21 H -0.214 1.214 22 H -0.208 1.208 23 C 0.019 3.981 24 C -0.086 4.086 25 C -0.180 4.180 26 C -0.016 4.016 27 H 0.109 0.891 28 H 0.104 0.896 29 H 0.122 0.878 30 H 0.106 0.894 31 H 0.083 0.917 32 H 0.080 0.920 33 H 0.070 0.930 34 H 0.074 0.926 35 H 0.094 0.906 36 H 0.042 0.958 37 H 0.063 0.937 38 H 0.037 0.963 39 H 0.057 0.943 40 H 0.082 0.918 41 H 0.072 0.928 42 H 0.074 0.926 43 H 0.110 0.890 44 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges 4.495 4.724 12.704 14.280 hybrid contribution -1.164 -0.028 -0.793 1.409 sum 3.331 4.695 11.911 13.229 Atomic orbital electron populations 1.20327 0.83099 1.05441 1.04359 1.26169 1.00301 0.85257 0.98844 1.74996 0.91263 1.24121 1.18509 1.85032 1.23257 1.17054 1.63582 1.75366 1.23006 0.92451 1.13331 1.26043 0.87848 0.98333 1.06639 1.15780 0.84394 0.80835 0.77548 1.90795 1.18322 1.79191 1.50927 1.48277 1.06454 1.07102 1.69888 1.22473 1.00862 0.77614 0.98386 1.22613 0.94093 0.94193 0.99416 1.21620 1.00671 0.95441 1.00258 1.21213 0.99976 0.88119 0.85172 1.44304 1.19641 1.22707 1.44600 1.18855 1.11725 0.93419 1.11435 0.91262 1.24795 1.00379 0.95503 0.99108 1.69910 1.33742 1.06749 1.45517 0.86231 0.80599 0.79128 0.80499 1.21491 1.21435 1.20796 1.21361 0.90152 0.96924 0.89710 1.22812 0.94487 0.94460 0.96844 1.21597 0.94753 1.00845 1.00822 1.23121 0.79015 1.00599 0.98854 0.89071 0.89575 0.87801 0.89445 0.91725 0.92007 0.93037 0.92553 0.90611 0.95846 0.93669 0.96260 0.94305 0.91773 0.92757 0.92583 0.88977 0.91562 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.90 10.22 36.00 0.37 -0.54 16 2 C 0.06 0.91 7.79 -79.33 -0.62 0.29 16 3 N -0.36 -5.36 12.22 33.75 0.41 -4.94 16 4 O 0.33 4.92 11.65 27.27 0.32 5.24 16 5 N -0.32 -5.09 9.64 33.49 0.32 -4.76 16 6 C -0.02 -0.39 7.38 -80.07 -0.59 -0.98 16 7 C 0.63 12.11 7.94 -12.13 -0.10 12.02 16 8 O -0.52 -10.98 16.22 5.37 0.09 -10.90 16 9 N -0.59 -10.51 3.32 -168.80 -0.56 -11.07 16 10 C 0.13 2.19 6.05 -2.47 -0.01 2.18 16 11 C -0.10 -1.73 1.06 -152.32 -0.16 -1.89 16 12 C -0.12 -1.67 7.50 37.16 0.28 -1.39 16 13 C 0.18 4.18 4.70 -3.27 -0.02 4.16 16 14 N -0.59 -14.66 3.38 -171.00 -0.58 -15.24 16 15 C -0.23 -6.32 10.28 -15.06 -0.15 -6.48 16 16 H 0.07 1.94 7.85 -52.48 -0.41 1.52 16 17 C 0.00 -0.02 5.38 -17.43 -0.09 -0.11 16 18 N -0.91 -26.77 10.87 55.49 0.60 -26.16 16 19 Si 0.91 22.65 29.56 -169.99 -5.03 17.62 16 20 H -0.29 -7.13 7.11 56.52 0.40 -6.73 16 21 H -0.29 -7.25 7.11 56.52 0.40 -6.85 16 22 H -0.28 -7.00 7.11 56.52 0.40 -6.60 16 23 C 0.15 2.95 6.35 -3.12 -0.02 2.93 16 24 C -0.08 -1.34 1.15 -150.81 -0.17 -1.52 16 25 C -0.12 -1.50 7.65 37.15 0.28 -1.22 16 26 C 0.11 1.67 5.88 -1.09 -0.01 1.66 16 27 H 0.09 0.90 8.14 -51.93 -0.42 0.48 16 28 H 0.09 0.88 8.14 -51.93 -0.42 0.45 16 29 H 0.10 1.43 7.32 -51.93 -0.38 1.05 16 30 H 0.09 1.71 7.16 -51.93 -0.37 1.34 16 31 H 0.06 0.91 7.97 -51.93 -0.41 0.50 16 32 H 0.06 0.84 7.10 -51.93 -0.37 0.47 16 33 H 0.05 0.58 7.16 -51.93 -0.37 0.21 16 34 H 0.06 0.76 8.14 -51.93 -0.42 0.33 16 35 H 0.08 2.02 6.02 -51.92 -0.31 1.70 16 36 H 0.02 0.59 7.88 -51.93 -0.41 0.18 16 37 H 0.25 7.25 8.31 -40.82 -0.34 6.91 16 38 H 0.02 0.40 7.93 -51.93 -0.41 -0.01 16 39 H 0.04 0.80 7.47 -51.93 -0.39 0.41 16 40 H 0.06 0.80 7.09 -51.93 -0.37 0.43 16 41 H 0.05 0.61 8.14 -51.93 -0.42 0.18 16 42 H 0.06 0.59 7.16 -51.93 -0.37 0.22 16 43 H 0.09 1.50 5.04 -51.93 -0.26 1.24 16 44 H 0.07 0.87 8.00 -51.93 -0.42 0.45 16 LS Contribution 349.53 15.07 5.27 5.27 Total: -1.00 -31.69 349.53 -6.25 -37.94 By element: Atomic # 1 Polarization: 3.98 SS G_CDS: -6.08 Total: -2.10 kcal Atomic # 6 Polarization: 10.13 SS G_CDS: -1.01 Total: 9.11 kcal Atomic # 7 Polarization: -62.38 SS G_CDS: 0.20 Total: -62.18 kcal Atomic # 8 Polarization: -6.06 SS G_CDS: 0.40 Total: -5.66 kcal Atomic # 14 Polarization: 22.65 SS G_CDS: -5.03 Total: 17.62 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -31.69 -6.25 -37.94 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000982849893.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 157.081 kcal (2) G-P(sol) polarization free energy of solvation -31.688 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 125.393 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.250 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.938 kcal (6) G-S(sol) free energy of system = (1) + (5) 119.143 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds