Wall clock time and date at job start Tue Mar 31 2020 13:09:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 N 1.46500 * 109.46954 * 2 1 4 4 C 1.46510 * 119.99817 * 90.00523 * 3 2 1 5 5 C 1.50697 * 109.47303 * 89.99614 * 4 3 2 6 6 H 1.08006 * 119.99995 * 0.02562 * 5 4 3 7 7 C 1.37873 * 119.99987 * 179.97438 * 5 4 3 8 8 N 1.31517 * 120.00148 * 359.97438 * 7 5 4 9 9 Si 1.86802 * 119.99908 * 180.02562 * 7 5 4 10 10 H 1.48500 * 109.46768 * 90.00079 * 9 7 5 11 11 H 1.48500 * 109.47080 * 210.00085 * 9 7 5 12 12 H 1.48493 * 109.47209 * 330.00214 * 9 7 5 13 13 C 1.34775 * 120.00386 * 270.00176 * 3 2 1 14 14 O 1.21282 * 120.00326 * 180.02562 * 13 3 2 15 15 C 1.50701 * 119.99769 * 0.02562 * 13 3 2 16 16 N 1.46903 * 109.47173 * 173.74803 * 15 13 3 17 17 C 1.46840 * 111.00063 * 169.39791 * 16 15 13 18 18 C 1.53037 * 109.52624 * 185.83892 * 17 16 15 19 19 C 1.53118 * 109.27794 * 300.82452 * 18 17 16 20 20 C 1.50702 * 109.52646 * 177.55626 * 19 18 17 21 21 C 1.39874 * 126.03501 * 300.01345 * 20 19 18 22 22 N 1.30840 * 108.19767 * 179.81509 * 21 20 19 23 23 N 1.40084 * 108.20840 * 0.43594 * 22 21 20 24 24 H 0.96999 * 126.04246 * 179.70003 * 23 22 21 25 25 C 1.34959 * 107.92147 * 359.72048 * 23 22 21 26 26 C 1.53119 * 109.16223 * 57.65181 * 19 18 17 27 27 C 1.46847 * 110.99751 * 293.61157 * 16 15 13 28 28 H 1.08999 * 109.46965 * 299.99491 * 1 2 3 29 29 H 1.08996 * 109.47104 * 59.99686 * 1 2 3 30 30 H 1.08992 * 109.46931 * 180.02562 * 1 2 3 31 31 H 1.08999 * 109.46965 * 240.00509 * 2 1 3 32 32 H 1.08996 * 109.47104 * 120.00314 * 2 1 3 33 33 H 1.09004 * 109.46969 * 209.99954 * 4 3 2 34 34 H 1.09002 * 109.46728 * 329.99595 * 4 3 2 35 35 H 0.96998 * 120.00236 * 179.97438 * 8 7 5 36 36 H 1.08998 * 109.46806 * 293.74507 * 15 13 3 37 37 H 1.08997 * 109.47347 * 53.75003 * 15 13 3 38 38 H 1.09001 * 109.46347 * 305.85916 * 17 16 15 39 39 H 1.09002 * 109.46193 * 65.82383 * 17 16 15 40 40 H 1.08997 * 109.50548 * 180.88357 * 18 17 16 41 41 H 1.09000 * 109.53381 * 60.77822 * 18 17 16 42 42 H 1.08999 * 109.57651 * 297.71885 * 19 18 17 43 43 H 1.07995 * 125.90097 * 359.97438 * 21 20 19 44 44 H 1.08003 * 126.12398 * 180.02562 * 25 23 22 45 45 H 1.09000 * 109.50539 * 182.40697 * 26 19 18 46 46 H 1.08999 * 109.53840 * 62.30364 * 26 19 18 47 47 H 1.08998 * 109.46451 * 294.17150 * 27 16 15 48 48 H 1.08994 * 109.46498 * 54.15556 * 27 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 7 2.0184 1.3812 0.0000 4 6 2.2626 2.0718 1.2688 5 6 3.6859 1.8350 1.7038 6 1 4.3430 1.2308 1.0958 7 6 4.1495 2.3904 2.8775 8 7 3.3498 3.1273 3.6172 9 14 5.9140 2.0974 3.4163 10 1 6.7851 3.1629 2.8587 11 1 5.9892 2.1220 4.8992 12 1 6.3701 0.7745 2.9194 13 6 2.2430 2.0167 -1.1671 14 8 2.6476 3.1600 -1.1671 15 6 1.9912 1.3065 -2.4723 16 7 2.1649 2.2501 -3.5847 17 6 2.1764 1.5474 -4.8739 18 6 2.5034 2.5380 -5.9936 19 6 1.4519 3.6509 -6.0070 20 6 1.8018 4.6619 -7.0685 21 6 2.9776 5.4169 -7.1300 22 7 2.9197 6.1775 -8.1930 23 7 1.6990 5.9375 -8.8369 24 1 1.3881 6.3669 -9.6493 25 6 1.0316 5.0036 -8.1272 26 6 1.4266 4.3351 -4.6374 27 6 1.1307 3.2922 -3.5570 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8899 30 1 -0.3633 -1.0276 0.0005 31 1 1.8934 -0.5138 -0.8900 32 1 1.8934 -0.5139 0.8899 33 1 2.0956 3.1411 1.1385 34 1 1.5818 1.6876 2.0285 35 1 3.6759 3.5177 4.4431 36 1 2.6978 0.4836 -2.5802 37 1 0.9738 0.9156 -2.4829 38 1 2.9313 0.7614 -4.8525 39 1 1.1968 1.1050 -5.0551 40 1 2.4964 2.0192 -6.9522 41 1 3.4889 2.9707 -5.8211 42 1 0.4714 3.2245 -6.2192 43 1 3.7936 5.3769 -6.4236 44 1 0.0575 4.6008 -8.3624 45 1 0.6503 5.1001 -4.6270 46 1 2.3948 4.7964 -4.4424 47 1 0.1560 2.8418 -3.7444 48 1 1.1263 3.7737 -2.5792 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000377497145.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:09:18 Heat of formation + Delta-G solvation = 39.892097 kcal Electronic energy + Delta-G solvation = -27304.415749 eV Core-core repulsion = 23588.781242 eV Total energy + Delta-G solvation = -3715.634507 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 320.195 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -41.42389 -39.52689 -38.08941 -35.21786 -34.17273 -32.73059 -31.47041 -30.73839 -30.11570 -29.91736 -27.83270 -26.07639 -23.54190 -23.05564 -22.92679 -22.26055 -22.00794 -20.33749 -19.59044 -18.22881 -17.78143 -16.53238 -16.23630 -15.85297 -15.17981 -14.93314 -14.77342 -14.71919 -14.33630 -14.30913 -14.11317 -13.60150 -13.40103 -13.29264 -13.20907 -12.76583 -12.56978 -12.44348 -12.02334 -11.94008 -11.65542 -11.46971 -11.26447 -11.14472 -11.08926 -10.87145 -10.68157 -10.53482 -10.51133 -10.44260 -10.32401 -10.07148 -9.81479 -9.56470 -8.78313 -8.61041 -8.38421 -8.04628 -7.56625 -5.99384 -4.03597 1.70636 2.63263 2.71515 3.35154 3.41170 3.42657 3.54398 3.73127 4.27648 4.49237 4.51178 4.69081 4.81063 4.95854 5.10561 5.15249 5.30766 5.33916 5.35619 5.37929 5.40375 5.45517 5.49655 5.57959 5.64498 5.67401 5.71239 5.75637 5.80789 5.94136 6.00980 6.05098 6.08550 6.24816 6.25731 6.31657 6.47639 6.49818 6.53582 7.03849 7.05360 7.24208 7.30411 7.47210 7.50953 7.63390 7.97960 8.29675 8.51949 8.97143 9.22295 9.61650 11.08654 Molecular weight = 320.20amu Principal moments of inertia in cm(-1) A = 0.017250 B = 0.002748 C = 0.002521 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1622.832656 B =10185.473005 C =11103.056986 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C 0.108 3.892 3 N -0.601 5.601 4 C 0.248 3.752 5 C -0.523 4.523 6 H 0.057 0.943 7 C 0.060 3.940 8 N -0.896 5.896 9 Si 0.897 3.103 10 H -0.279 1.279 11 H -0.287 1.287 12 H -0.275 1.275 13 C 0.506 3.494 14 O -0.521 6.521 15 C 0.037 3.963 16 N -0.518 5.518 17 C 0.057 3.943 18 C -0.104 4.104 19 C -0.010 4.010 20 C -0.220 4.220 21 C 0.062 3.938 22 N -0.299 5.299 23 N -0.483 5.483 24 H 0.437 0.563 25 C 0.052 3.948 26 C -0.102 4.102 27 C 0.055 3.945 28 H 0.060 0.940 29 H 0.048 0.952 30 H 0.058 0.942 31 H 0.062 0.938 32 H 0.081 0.919 33 H 0.042 0.958 34 H 0.030 0.970 35 H 0.262 0.738 36 H 0.096 0.904 37 H 0.053 0.947 38 H 0.074 0.926 39 H 0.029 0.971 40 H 0.063 0.937 41 H 0.074 0.926 42 H 0.068 0.932 43 H 0.184 0.816 44 H 0.173 0.827 45 H 0.063 0.937 46 H 0.075 0.925 47 H 0.023 0.977 48 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.101 -3.651 -22.458 24.506 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.227 4.227 2 C -0.017 4.017 3 N -0.335 5.335 4 C 0.129 3.871 5 C -0.562 4.562 6 H 0.075 0.925 7 C -0.141 4.141 8 N -0.536 5.536 9 Si 0.725 3.275 10 H -0.205 1.205 11 H -0.212 1.212 12 H -0.200 1.200 13 C 0.291 3.709 14 O -0.397 6.397 15 C -0.094 4.094 16 N -0.242 5.242 17 C -0.071 4.071 18 C -0.142 4.142 19 C -0.030 4.030 20 C -0.232 4.232 21 C -0.124 4.124 22 N -0.121 5.121 23 N -0.191 5.191 24 H 0.280 0.720 25 C -0.095 4.095 26 C -0.140 4.140 27 C -0.073 4.073 28 H 0.080 0.920 29 H 0.067 0.933 30 H 0.077 0.923 31 H 0.080 0.920 32 H 0.100 0.900 33 H 0.060 0.940 34 H 0.048 0.952 35 H 0.072 0.928 36 H 0.114 0.886 37 H 0.071 0.929 38 H 0.092 0.908 39 H 0.047 0.953 40 H 0.082 0.918 41 H 0.093 0.907 42 H 0.087 0.913 43 H 0.201 0.799 44 H 0.190 0.810 45 H 0.081 0.919 46 H 0.094 0.906 47 H 0.041 0.959 48 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -7.827 -1.819 -22.894 24.263 hybrid contribution -0.477 -1.094 0.406 1.260 sum -8.303 -2.913 -22.488 24.148 Atomic orbital electron populations 1.22223 0.97005 1.01276 1.02191 1.21376 0.93323 0.84459 1.02526 1.48278 1.64249 1.13192 1.07750 1.19228 0.96147 0.93583 0.78147 1.21446 0.96954 1.31688 1.06098 0.92500 1.24931 0.97775 0.94990 0.96447 1.69933 1.35616 1.33584 1.14420 0.86513 0.84913 0.78635 0.77443 1.20537 1.21241 1.19966 1.20155 0.78863 0.87175 0.84685 1.90657 1.44430 1.17813 1.86800 1.22063 1.00891 0.95406 0.91007 1.61516 1.48946 1.12691 1.01092 1.22104 0.99759 0.96098 0.89151 1.21596 0.99797 0.95805 0.96988 1.19534 0.98470 0.92826 0.92165 1.20142 0.96610 1.06035 1.00397 1.23861 0.98738 0.94161 0.95677 1.77346 1.00665 1.24111 1.10005 1.46282 1.14812 1.33859 1.24161 0.72007 1.22376 0.98950 0.94004 0.94137 1.21581 1.02897 0.97204 0.92349 1.22196 0.90855 0.92981 1.01236 0.92044 0.93277 0.92282 0.91958 0.90010 0.93985 0.95196 0.92798 0.88612 0.92901 0.90801 0.95295 0.91822 0.90741 0.91335 0.79946 0.81002 0.91878 0.90596 0.95917 0.88908 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.22 10.18 37.16 0.38 -1.84 16 2 C 0.11 1.70 5.85 -4.04 -0.02 1.67 16 3 N -0.60 -12.59 2.46 -175.05 -0.43 -13.02 16 4 C 0.25 6.48 5.16 -5.19 -0.03 6.46 16 5 C -0.52 -14.92 9.39 -34.44 -0.32 -15.24 16 6 H 0.06 1.63 7.81 -52.48 -0.41 1.22 16 7 C 0.06 1.74 5.46 -17.82 -0.10 1.64 16 8 N -0.90 -26.85 13.29 55.43 0.74 -26.11 16 9 Si 0.90 22.12 29.54 -169.99 -5.02 17.10 16 10 H -0.28 -6.94 7.11 56.52 0.40 -6.54 16 11 H -0.29 -6.91 7.11 56.52 0.40 -6.51 16 12 H -0.27 -6.60 7.11 56.52 0.40 -6.20 16 13 C 0.51 10.42 7.20 -10.99 -0.08 10.35 16 14 O -0.52 -13.04 14.29 5.56 0.08 -12.96 16 15 C 0.04 0.56 3.91 -4.97 -0.02 0.54 16 16 N -0.52 -7.51 4.35 -236.12 -1.03 -8.53 16 17 C 0.06 0.62 5.46 -3.84 -0.02 0.60 16 18 C -0.10 -1.03 5.29 -26.65 -0.14 -1.17 16 19 C -0.01 -0.10 2.62 -91.65 -0.24 -0.34 16 20 C -0.22 -2.14 4.81 -105.05 -0.51 -2.65 16 21 C 0.06 0.69 11.36 -17.36 -0.20 0.49 16 22 N -0.30 -3.46 12.70 30.63 0.39 -3.07 16 23 N -0.48 -3.99 7.36 30.45 0.22 -3.77 16 24 H 0.44 2.16 8.96 -182.61 -1.64 0.53 16 25 C 0.05 0.41 11.88 -17.22 -0.20 0.20 16 26 C -0.10 -1.24 5.29 -26.65 -0.14 -1.38 16 27 C 0.05 0.77 5.12 -3.83 -0.02 0.75 16 28 H 0.06 0.90 8.14 -51.93 -0.42 0.48 16 29 H 0.05 0.62 7.12 -51.93 -0.37 0.25 16 30 H 0.06 0.62 8.14 -51.93 -0.42 0.20 16 31 H 0.06 0.81 6.61 -51.93 -0.34 0.47 16 32 H 0.08 1.35 8.07 -51.93 -0.42 0.93 16 33 H 0.04 1.24 7.42 -51.93 -0.39 0.86 16 34 H 0.03 0.79 8.07 -51.93 -0.42 0.37 16 35 H 0.26 7.43 8.31 -40.82 -0.34 7.09 16 36 H 0.10 1.31 7.55 -51.93 -0.39 0.91 16 37 H 0.05 0.69 6.83 -51.93 -0.35 0.34 16 38 H 0.07 0.76 8.01 -51.93 -0.42 0.34 16 39 H 0.03 0.29 8.14 -51.93 -0.42 -0.14 16 40 H 0.06 0.55 8.14 -51.93 -0.42 0.12 16 41 H 0.07 0.83 7.96 -51.93 -0.41 0.42 16 42 H 0.07 0.60 8.11 -51.93 -0.42 0.18 16 43 H 0.18 1.84 8.06 -52.49 -0.42 1.42 16 44 H 0.17 0.75 8.06 -52.48 -0.42 0.33 16 45 H 0.06 0.72 8.14 -51.93 -0.42 0.30 16 46 H 0.08 1.04 7.96 -51.93 -0.41 0.63 16 47 H 0.02 0.29 8.14 -51.93 -0.42 -0.14 16 48 H 0.09 1.64 6.06 -51.93 -0.31 1.32 16 LS Contribution 384.08 15.07 5.79 5.79 Total: -1.00 -35.16 384.08 -10.15 -45.31 By element: Atomic # 1 Polarization: 8.41 SS G_CDS: -9.23 Total: -0.82 kcal Atomic # 6 Polarization: 1.75 SS G_CDS: -1.66 Total: 0.09 kcal Atomic # 7 Polarization: -54.40 SS G_CDS: -0.11 Total: -54.51 kcal Atomic # 8 Polarization: -13.04 SS G_CDS: 0.08 Total: -12.96 kcal Atomic # 14 Polarization: 22.12 SS G_CDS: -5.02 Total: 17.10 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -35.16 -10.15 -45.31 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000377497145.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.198 kcal (2) G-P(sol) polarization free energy of solvation -35.159 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.039 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.147 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.306 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.892 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds