Wall clock time and date at job start Tue Mar 31 2020 13:21:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09002 * 109.47153 * 2 1 4 4 N 1.46896 * 109.46848 * 240.00028 * 2 1 3 5 5 C 1.46901 * 110.99913 * 85.00348 * 4 2 1 6 6 C 1.53002 * 109.47317 * 180.02562 * 5 4 2 7 7 C 1.50695 * 109.47379 * 179.97438 * 6 5 4 8 8 H 1.08004 * 120.00042 * 359.97438 * 7 6 5 9 9 C 1.37876 * 120.00287 * 179.97438 * 7 6 5 10 10 N 1.31514 * 120.00478 * 180.02562 * 9 7 6 11 11 Si 1.86806 * 119.99823 * 359.97438 * 9 7 6 12 12 H 1.48489 * 109.47351 * 89.99753 * 11 9 7 13 13 H 1.48504 * 109.47065 * 210.00251 * 11 9 7 14 14 H 1.48505 * 109.47046 * 329.99486 * 11 9 7 15 15 C 1.50701 * 109.47212 * 119.99998 * 2 1 3 16 16 C 1.38615 * 120.42332 * 99.99912 * 15 2 1 17 17 C 1.38663 * 118.43615 * 180.02562 * 16 15 2 18 18 C 1.38189 * 119.19180 * 359.97438 * 17 16 15 19 19 C 1.50703 * 119.60964 * 180.02562 * 18 17 16 20 20 F 1.39897 * 109.47070 * 90.00055 * 19 18 17 21 21 F 1.39899 * 109.47143 * 210.00465 * 19 18 17 22 22 F 1.39902 * 109.46840 * 330.00191 * 19 18 17 23 23 N 1.31875 * 120.78293 * 0.02562 * 18 17 16 24 24 C 1.31982 * 121.70474 * 359.69808 * 23 18 17 25 25 Cl 1.73601 * 119.63495 * 180.28890 * 24 23 18 26 26 H 1.08996 * 109.47853 * 59.99972 * 1 2 3 27 27 H 1.09002 * 109.47153 * 180.02562 * 1 2 3 28 28 H 1.08998 * 109.47533 * 299.99629 * 1 2 3 29 29 H 1.00896 * 111.00728 * 321.04492 * 4 2 1 30 30 H 1.09007 * 109.47248 * 299.99411 * 5 4 2 31 31 H 1.08990 * 109.47767 * 59.99672 * 5 4 2 32 32 H 1.09010 * 109.46876 * 299.99637 * 6 5 4 33 33 H 1.09000 * 109.47585 * 59.99024 * 6 5 4 34 34 H 0.96996 * 119.99919 * 180.02562 * 10 9 7 35 35 H 1.08005 * 120.77992 * 359.97438 * 16 15 2 36 36 H 1.08002 * 120.40503 * 179.97438 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 7 2.0196 -0.6925 -1.1994 5 6 2.0824 0.2226 -2.3468 6 6 2.5949 -0.5331 -3.5745 7 6 2.6588 0.4055 -4.7517 8 1 2.3630 1.4378 -4.6360 9 6 3.0948 -0.0534 -5.9766 10 7 3.1510 0.7658 -7.0038 11 14 3.6071 -1.8387 -6.1766 12 1 2.4281 -2.6509 -6.5705 13 1 4.6512 -1.9393 -7.2278 14 1 4.1496 -2.3451 -4.8902 15 6 2.0323 -0.7104 1.2305 16 6 2.4620 -2.0261 1.1551 17 6 2.9156 -2.6400 2.3128 18 6 2.9250 -1.9251 3.4954 19 6 3.4165 -2.5828 4.7591 20 9 4.7933 -2.3715 4.8896 21 9 2.7535 -2.0309 5.8604 22 9 3.1591 -3.9567 4.7003 23 7 2.5089 -0.6742 3.5313 24 6 2.0756 -0.0561 2.4487 25 17 1.5473 1.5941 2.5559 26 1 -0.3635 0.5138 -0.8899 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5137 0.8900 29 1 1.4495 -1.4979 -1.4101 30 1 1.0870 0.6164 -2.5525 31 1 2.7587 1.0462 -2.1183 32 1 3.5903 -0.9272 -3.3692 33 1 1.9182 -1.3565 -3.8030 34 1 3.4574 0.4427 -7.8656 35 1 2.4431 -2.5608 0.2169 36 1 3.2573 -3.6642 2.2905 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000856776607.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:21:06 Heat of formation + Delta-G solvation = -126.036353 kcal Electronic energy + Delta-G solvation = -24309.794917 eV Core-core repulsion = 20018.714124 eV Total energy + Delta-G solvation = -4291.080794 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 322.075 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -50.47488 -48.02215 -47.90675 -40.98532 -37.46998 -36.98524 -33.95862 -32.71234 -32.32704 -30.73459 -28.52426 -26.89769 -24.72536 -23.80014 -23.39678 -21.12972 -20.59711 -19.13398 -18.86095 -18.81382 -17.24410 -16.81492 -16.35293 -15.85846 -15.19343 -14.98871 -14.75813 -14.69692 -14.55752 -14.37078 -14.08980 -14.07241 -14.05346 -13.84150 -13.69207 -13.01913 -12.89548 -12.56227 -12.50595 -12.32329 -11.93588 -11.67612 -11.54377 -11.23371 -11.10289 -10.33841 -10.27543 -10.20429 -9.96612 -9.83308 -9.41401 -9.31540 -8.60890 -8.25648 -6.11029 -4.10308 0.19367 0.61990 1.34838 2.14947 2.90390 3.18071 3.25889 3.34428 3.37875 3.58569 3.99050 4.04379 4.26266 4.36633 4.39333 4.56691 4.70024 4.71081 4.99006 5.12872 5.23269 5.32435 5.50593 5.63671 5.75884 5.84932 5.95944 6.03137 6.15918 6.62533 6.92607 6.95697 7.22501 7.38663 7.53901 7.74967 8.44853 8.92650 9.50706 11.02220 Molecular weight = 322.08amu Principal moments of inertia in cm(-1) A = 0.017282 B = 0.002965 C = 0.002653 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1619.819549 B = 9440.679846 C =10550.683897 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.115 3.885 3 H 0.103 0.897 4 N -0.688 5.688 5 C 0.074 3.926 6 C -0.009 4.009 7 C -0.524 4.524 8 H 0.071 0.929 9 C 0.068 3.932 10 N -0.902 5.902 11 Si 0.881 3.119 12 H -0.278 1.278 13 H -0.288 1.288 14 H -0.264 1.264 15 C -0.063 4.063 16 C -0.039 4.039 17 C -0.119 4.119 18 C 0.040 3.960 19 C 0.527 3.473 20 F -0.169 7.169 21 F -0.164 7.164 22 F -0.170 7.170 23 N -0.439 5.439 24 C 0.175 3.825 25 Cl -0.012 7.012 26 H 0.072 0.928 27 H 0.060 0.940 28 H 0.064 0.936 29 H 0.339 0.661 30 H 0.028 0.972 31 H 0.068 0.932 32 H 0.025 0.975 33 H 0.009 0.991 34 H 0.264 0.736 35 H 0.167 0.833 36 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.457 -7.101 22.989 24.308 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.004 3.996 3 H 0.121 0.879 4 N -0.318 5.318 5 C -0.054 4.054 6 C -0.047 4.047 7 C -0.562 4.562 8 H 0.089 0.911 9 C -0.134 4.134 10 N -0.541 5.541 11 Si 0.709 3.291 12 H -0.204 1.204 13 H -0.214 1.214 14 H -0.188 1.188 15 C -0.067 4.067 16 C -0.064 4.064 17 C -0.139 4.139 18 C -0.099 4.099 19 C 0.472 3.528 20 F -0.150 7.150 21 F -0.145 7.145 22 F -0.151 7.151 23 N -0.149 5.149 24 C 0.009 3.991 25 Cl 0.016 6.984 26 H 0.091 0.909 27 H 0.079 0.921 28 H 0.083 0.917 29 H 0.157 0.843 30 H 0.047 0.953 31 H 0.086 0.914 32 H 0.044 0.956 33 H 0.028 0.972 34 H 0.074 0.926 35 H 0.184 0.816 36 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges -2.755 -6.412 23.794 24.796 hybrid contribution -0.584 -1.103 -0.939 1.562 sum -3.339 -7.515 22.855 24.290 Atomic orbital electron populations 1.22469 0.95095 1.02717 1.03404 1.20508 0.93409 0.98055 0.87645 0.87944 1.60707 1.56108 1.10632 1.04396 1.22028 0.99310 0.94954 0.89066 1.19545 0.96569 0.96066 0.92520 1.21034 1.44588 0.97796 0.92797 0.91065 1.25010 0.94933 0.97643 0.95795 1.69908 1.47523 1.35399 1.01253 0.86752 0.78645 0.85533 0.78199 1.20386 1.21401 1.18801 1.20932 0.96343 0.94829 0.94574 1.21603 0.92742 0.93191 0.98905 1.21994 0.98208 1.01929 0.91759 1.20672 1.04031 0.91785 0.93440 1.17758 0.75667 0.76138 0.83268 1.93252 1.30976 1.94585 1.96210 1.93240 1.80396 1.85210 1.55675 1.93216 1.93893 1.31576 1.96452 1.66373 1.08867 1.08570 1.31121 1.21328 0.99418 0.89217 0.89136 1.98427 1.87569 1.14162 1.98225 0.90871 0.92115 0.91746 0.84320 0.95327 0.91390 0.95621 0.97227 0.92644 0.81597 0.82673 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -1.80 9.10 37.16 0.34 -1.46 16 2 C 0.12 1.34 2.26 -68.87 -0.16 1.18 16 3 H 0.10 1.27 7.01 -51.93 -0.36 0.91 16 4 N -0.69 -9.39 5.12 -107.95 -0.55 -9.95 16 5 C 0.07 1.31 5.42 -3.82 -0.02 1.29 16 6 C -0.01 -0.20 4.30 -27.88 -0.12 -0.32 16 7 C -0.52 -14.29 9.66 -34.44 -0.33 -14.62 16 8 H 0.07 2.09 7.99 -52.48 -0.42 1.67 16 9 C 0.07 1.91 5.47 -17.82 -0.10 1.82 16 10 N -0.90 -27.20 13.96 55.43 0.77 -26.43 16 11 Si 0.88 20.97 27.47 -169.99 -4.67 16.30 16 12 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 13 H -0.29 -6.86 7.11 56.52 0.40 -6.46 16 14 H -0.26 -6.00 6.54 56.52 0.37 -5.63 16 15 C -0.06 -0.70 5.10 -104.44 -0.53 -1.24 16 16 C -0.04 -0.38 9.44 -39.29 -0.37 -0.75 16 17 C -0.12 -1.08 9.43 -39.44 -0.37 -1.45 16 18 C 0.04 0.44 6.29 -82.59 -0.52 -0.08 16 19 C 0.53 5.46 3.43 36.01 0.12 5.58 16 20 F -0.17 -1.83 17.30 2.25 0.04 -1.79 16 21 F -0.16 -1.87 17.04 2.25 0.04 -1.83 16 22 F -0.17 -1.56 16.44 2.25 0.04 -1.52 16 23 N -0.44 -5.53 9.94 -6.62 -0.07 -5.60 16 24 C 0.18 2.10 7.27 -17.45 -0.13 1.97 16 25 Cl -0.01 -0.14 26.83 -51.86 -1.39 -1.53 16 26 H 0.07 0.78 7.45 -51.93 -0.39 0.40 16 27 H 0.06 0.56 8.13 -51.93 -0.42 0.13 16 28 H 0.06 0.61 7.30 -51.93 -0.38 0.23 16 29 H 0.34 4.14 8.06 -39.29 -0.32 3.82 16 30 H 0.03 0.50 7.44 -51.93 -0.39 0.12 16 31 H 0.07 1.26 8.05 -51.93 -0.42 0.84 16 32 H 0.03 0.58 7.20 -51.92 -0.37 0.21 16 33 H 0.01 0.20 7.57 -51.93 -0.39 -0.19 16 34 H 0.26 7.45 8.31 -40.82 -0.34 7.11 16 35 H 0.17 1.42 6.97 -52.48 -0.37 1.05 16 36 H 0.16 1.00 7.60 -52.49 -0.40 0.60 16 LS Contribution 331.13 15.07 4.99 4.99 Total: -1.00 -29.94 331.13 -6.78 -36.71 By element: Atomic # 1 Polarization: 2.52 SS G_CDS: -3.79 Total: -1.27 kcal Atomic # 6 Polarization: -5.90 SS G_CDS: -2.19 Total: -8.09 kcal Atomic # 7 Polarization: -42.13 SS G_CDS: 0.15 Total: -41.98 kcal Atomic # 9 Polarization: -5.26 SS G_CDS: 0.11 Total: -5.15 kcal Atomic # 14 Polarization: 20.97 SS G_CDS: -4.67 Total: 16.30 kcal Atomic # 17 Polarization: -0.14 SS G_CDS: -1.39 Total: -1.53 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -29.94 -6.78 -36.71 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000856776607.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.322 kcal (2) G-P(sol) polarization free energy of solvation -29.935 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.257 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.780 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.715 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.036 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds