Wall clock time and date at job start Tue Mar 31 2020 15:28:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.36064 * 117.00181 * 2 1 4 4 C 1.38550 * 120.00235 * 0.02562 * 3 2 1 5 5 C 1.38197 * 120.06511 * 179.97438 * 4 3 2 6 6 C 1.38834 * 120.07477 * 0.02638 * 5 4 3 7 7 N 1.40139 * 119.99487 * 179.97438 * 6 5 4 8 8 C 1.34774 * 120.00187 * 36.05142 * 7 6 5 9 9 O 1.21595 * 119.99843 * 355.29183 * 8 7 6 10 10 N 1.34780 * 120.00623 * 175.28798 * 8 7 6 11 11 C 1.46495 * 120.00556 * 180.02562 * 10 8 7 12 12 C 1.53002 * 109.47311 * 179.97438 * 11 10 8 13 13 C 1.50702 * 109.47011 * 179.97438 * 12 11 10 14 14 H 1.07994 * 120.00128 * 0.02562 * 13 12 11 15 15 C 1.37876 * 119.99590 * 179.97438 * 13 12 11 16 16 N 1.31506 * 120.00198 * 0.02562 * 15 13 12 17 17 Si 1.86801 * 119.99603 * 179.97438 * 15 13 12 18 18 H 1.48497 * 109.46926 * 90.00606 * 17 15 13 19 19 H 1.48503 * 109.47208 * 210.00208 * 17 15 13 20 20 H 1.48500 * 109.47429 * 330.00233 * 17 15 13 21 21 C 1.38795 * 120.00980 * 359.74709 * 6 5 4 22 22 C 1.38512 * 119.93208 * 0.48348 * 21 6 5 23 23 O 1.35985 * 120.03868 * 179.79400 * 22 21 6 24 24 C 1.42907 * 117.00145 * 5.30535 * 23 22 21 25 25 C 1.52999 * 109.46781 * 274.59963 * 24 23 22 26 26 C 1.52997 * 109.47437 * 154.59843 * 24 23 22 27 27 H 1.08998 * 109.46857 * 60.00613 * 1 2 3 28 28 H 1.09000 * 109.46879 * 180.02562 * 1 2 3 29 29 H 1.08997 * 109.47420 * 300.00609 * 1 2 3 30 30 H 1.07996 * 119.96960 * 359.97438 * 4 3 2 31 31 H 1.07998 * 119.96098 * 180.02562 * 5 4 3 32 32 H 0.97003 * 120.00117 * 216.05920 * 7 6 5 33 33 H 0.97004 * 119.99130 * 0.02562 * 10 8 7 34 34 H 1.09001 * 109.46962 * 300.00388 * 11 10 8 35 35 H 1.09003 * 109.47063 * 59.99411 * 11 10 8 36 36 H 1.08995 * 109.46640 * 299.99823 * 12 11 10 37 37 H 1.09003 * 109.46822 * 60.00007 * 12 11 10 38 38 H 0.97004 * 120.00496 * 179.97438 * 16 15 13 39 39 H 1.08003 * 120.03645 * 180.27803 * 21 6 5 40 40 H 1.09000 * 109.47038 * 34.59228 * 24 23 22 41 41 H 1.09001 * 109.47193 * 299.99706 * 25 24 23 42 42 H 1.08998 * 109.47379 * 180.02562 * 25 24 23 43 43 H 1.09000 * 109.47299 * 59.99532 * 25 24 23 44 44 H 1.09001 * 109.46931 * 179.97438 * 26 24 23 45 45 H 1.08998 * 109.46960 * 299.99758 * 26 24 23 46 46 H 1.09001 * 109.47071 * 59.99967 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0468 1.2123 0.0000 4 6 1.2922 2.3744 0.0005 5 6 1.9183 3.6064 0.0011 6 6 3.3046 3.6823 0.0005 7 7 3.9377 4.9325 0.0005 8 6 3.4007 5.9599 0.6878 9 8 2.3240 5.8272 1.2371 10 7 4.0569 7.1345 0.7666 11 6 3.4734 8.2511 1.5141 12 6 4.4134 9.4564 1.4471 13 6 3.8128 10.6052 2.2157 14 1 2.8565 10.4873 2.7034 15 6 4.4846 11.8064 2.2969 16 7 5.6493 11.9498 1.7033 17 14 3.7398 13.2306 3.2489 18 1 4.1877 13.1686 4.6633 19 1 4.1811 14.5139 2.6458 20 1 2.2585 13.1416 3.1944 21 6 4.0635 2.5202 0.0047 22 6 3.4364 1.2852 -0.0006 23 8 4.1778 0.1453 -0.0008 24 6 5.5939 0.2923 0.1225 25 6 6.2035 0.5357 -1.2595 26 6 6.1885 -0.9822 0.7250 27 1 -0.3633 0.5137 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5139 0.8899 30 1 0.2138 2.3173 0.0005 31 1 1.3286 4.5111 0.0019 32 1 4.7625 5.0585 -0.4943 33 1 4.9157 7.2405 0.3281 34 1 2.5102 8.5163 1.0781 35 1 3.3328 7.9577 2.5545 36 1 5.3763 9.1908 1.8834 37 1 4.5543 9.7498 0.4068 38 1 6.1219 12.7951 1.7601 39 1 5.1419 2.5788 0.0088 40 1 5.8161 1.1392 0.7718 41 1 5.9814 -0.3110 -1.9089 42 1 7.2837 0.6475 -1.1656 43 1 5.7799 1.4437 -1.6887 44 1 7.2687 -0.8701 0.8186 45 1 5.7542 -1.1555 1.7095 46 1 5.9664 -1.8289 0.0756 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000274033518.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:28:22 Heat of formation + Delta-G solvation = -84.547884 kcal Electronic energy + Delta-G solvation = -26575.238807 eV Core-core repulsion = 22658.770853 eV Total energy + Delta-G solvation = -3916.467954 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 322.173 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -40.95751 -39.85479 -38.85081 -37.21423 -34.93989 -34.25802 -33.29472 -32.80419 -30.35469 -29.87241 -28.75636 -27.59360 -26.98727 -24.79443 -23.54925 -22.59673 -21.18985 -21.00514 -20.52975 -18.83147 -18.29416 -17.72499 -16.53948 -16.44292 -16.16231 -15.99261 -15.36910 -15.26141 -14.80757 -14.73907 -14.56261 -14.52558 -13.76691 -13.66363 -13.59506 -13.22130 -12.99326 -12.76972 -12.65930 -12.44253 -12.31771 -12.20468 -11.90618 -11.46100 -11.27259 -11.23033 -11.13964 -11.04137 -10.95223 -10.65985 -10.38099 -10.03994 -9.70531 -9.59355 -9.30008 -8.70763 -8.56260 -8.39096 -7.53668 -6.12136 -4.14967 1.15821 1.38754 2.78745 3.01072 3.19075 3.28016 3.32355 3.34333 3.38689 3.75256 4.34460 4.46043 4.51134 4.58833 4.66830 4.79118 4.85423 5.00447 5.01092 5.17941 5.22342 5.22477 5.25203 5.31173 5.36903 5.39780 5.43531 5.50344 5.68826 5.80055 5.84288 6.12870 6.27009 6.31819 6.33695 6.38666 6.70494 6.82938 6.86750 6.95247 7.10926 7.49015 7.51456 7.58197 7.86482 8.16741 8.29103 8.78961 8.91323 9.50037 10.99497 Molecular weight = 322.17amu Principal moments of inertia in cm(-1) A = 0.018785 B = 0.002207 C = 0.002022 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1490.169197 B =12686.428126 C =13840.999810 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.310 6.310 3 C 0.075 3.925 4 C -0.152 4.152 5 C -0.115 4.115 6 C 0.178 3.822 7 N -0.691 5.691 8 C 0.697 3.303 9 O -0.580 6.580 10 N -0.732 5.732 11 C 0.139 3.861 12 C 0.013 3.987 13 C -0.521 4.521 14 H 0.060 0.940 15 C 0.059 3.941 16 N -0.894 5.894 17 Si 0.897 3.103 18 H -0.279 1.279 19 H -0.286 1.286 20 H -0.272 1.272 21 C -0.206 4.206 22 C 0.121 3.879 23 O -0.299 6.299 24 C 0.074 3.926 25 C -0.180 4.180 26 C -0.147 4.147 27 H 0.053 0.947 28 H 0.097 0.903 29 H 0.054 0.946 30 H 0.136 0.864 31 H 0.147 0.853 32 H 0.405 0.595 33 H 0.395 0.605 34 H 0.056 0.944 35 H 0.056 0.944 36 H 0.022 0.978 37 H 0.023 0.977 38 H 0.262 0.738 39 H 0.138 0.862 40 H 0.073 0.927 41 H 0.067 0.933 42 H 0.071 0.929 43 H 0.063 0.937 44 H 0.075 0.925 45 H 0.065 0.935 46 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.196 -25.980 -7.060 26.948 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.223 6.223 3 C 0.029 3.971 4 C -0.171 4.171 5 C -0.136 4.136 6 C 0.082 3.918 7 N -0.340 5.340 8 C 0.398 3.602 9 O -0.457 6.457 10 N -0.385 5.385 11 C 0.016 3.984 12 C -0.025 4.025 13 C -0.560 4.560 14 H 0.078 0.922 15 C -0.143 4.143 16 N -0.533 5.533 17 Si 0.725 3.275 18 H -0.205 1.205 19 H -0.212 1.212 20 H -0.197 1.197 21 C -0.228 4.228 22 C 0.075 3.925 23 O -0.213 6.213 24 C 0.018 3.982 25 C -0.237 4.237 26 C -0.205 4.205 27 H 0.072 0.928 28 H 0.115 0.885 29 H 0.073 0.927 30 H 0.154 0.846 31 H 0.164 0.836 32 H 0.240 0.760 33 H 0.228 0.772 34 H 0.075 0.925 35 H 0.075 0.925 36 H 0.041 0.959 37 H 0.041 0.959 38 H 0.072 0.928 39 H 0.156 0.844 40 H 0.091 0.909 41 H 0.086 0.914 42 H 0.090 0.910 43 H 0.082 0.918 44 H 0.094 0.906 45 H 0.084 0.916 46 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -2.002 -26.241 -6.552 27.120 hybrid contribution 0.517 1.366 0.063 1.462 sum -1.485 -24.875 -6.489 25.751 Atomic orbital electron populations 1.23028 0.78903 1.03639 1.01261 1.86147 1.20700 1.25957 1.89541 1.18182 0.89019 0.85166 1.04708 1.20971 0.99949 0.90934 1.05295 1.21096 0.93199 0.98289 1.00977 1.17107 0.91392 0.83388 0.99882 1.42674 1.28980 1.08744 1.53561 1.16050 0.84274 0.80395 0.79505 1.90896 1.21175 1.82276 1.51349 1.45575 1.24148 1.11744 1.57027 1.21667 0.97783 0.84599 0.94306 1.19333 0.94510 0.90623 0.98006 1.21035 1.05683 0.96405 1.32882 0.92181 1.24994 0.94878 0.98817 0.95606 1.69948 1.14140 1.25694 1.43532 0.86503 0.79592 0.81443 0.79969 1.20544 1.21168 1.19701 1.20752 1.00161 0.90140 1.11701 1.17775 0.87958 0.85462 1.01335 1.86220 1.18645 1.28199 1.88214 1.22448 0.78831 0.99760 0.97197 1.22384 1.01241 1.03094 0.97004 1.21837 1.00470 0.96551 1.01603 0.92827 0.88491 0.92749 0.84588 0.83560 0.76019 0.77163 0.92512 0.92539 0.95928 0.95908 0.92825 0.84416 0.90870 0.91436 0.91043 0.91777 0.90592 0.91628 0.91499 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.21 9.81 101.05 0.99 1.20 16 2 O -0.31 -3.77 10.28 -34.55 -0.36 -4.13 16 3 C 0.07 0.97 6.70 -39.13 -0.26 0.70 16 4 C -0.15 -1.88 9.03 -39.48 -0.36 -2.23 16 5 C -0.11 -1.63 8.69 -39.38 -0.34 -1.97 16 6 C 0.18 2.40 6.28 -83.63 -0.53 1.87 16 7 N -0.69 -8.98 5.35 -14.20 -0.08 -9.06 16 8 C 0.70 11.85 8.40 -86.92 -0.73 11.12 16 9 O -0.58 -11.88 13.83 5.28 0.07 -11.81 16 10 N -0.73 -12.39 5.56 -65.22 -0.36 -12.75 16 11 C 0.14 2.89 5.61 -4.04 -0.02 2.87 16 12 C 0.01 0.31 5.09 -27.88 -0.14 0.17 16 13 C -0.52 -14.27 9.11 -34.44 -0.31 -14.58 16 14 H 0.06 1.61 7.74 -52.49 -0.41 1.21 16 15 C 0.06 1.63 5.46 -17.82 -0.10 1.54 16 16 N -0.89 -25.84 13.28 55.43 0.74 -25.10 16 17 Si 0.90 21.20 29.54 -169.99 -5.02 16.18 16 18 H -0.28 -6.52 7.11 56.52 0.40 -6.12 16 19 H -0.29 -6.68 7.11 56.52 0.40 -6.28 16 20 H -0.27 -6.33 7.11 56.52 0.40 -5.93 16 21 C -0.21 -2.41 8.18 -39.27 -0.32 -2.74 16 22 C 0.12 1.53 6.62 -39.14 -0.26 1.27 16 23 O -0.30 -3.58 9.58 -34.30 -0.33 -3.91 16 24 C 0.07 0.64 2.84 -26.73 -0.08 0.56 16 25 C -0.18 -1.28 9.19 37.16 0.34 -0.94 16 26 C -0.15 -1.02 9.56 37.16 0.36 -0.66 16 27 H 0.05 0.36 7.66 -51.93 -0.40 -0.04 16 28 H 0.10 0.55 8.14 -51.93 -0.42 0.13 16 29 H 0.05 0.39 7.66 -51.93 -0.40 0.00 16 30 H 0.14 1.35 6.29 -52.49 -0.33 1.02 16 31 H 0.15 2.32 6.28 -52.49 -0.33 1.99 16 32 H 0.40 3.86 8.84 -40.82 -0.36 3.50 16 33 H 0.40 5.63 8.49 -40.82 -0.35 5.28 16 34 H 0.06 1.23 8.14 -51.93 -0.42 0.80 16 35 H 0.06 1.23 8.14 -51.93 -0.42 0.81 16 36 H 0.02 0.57 8.14 -51.93 -0.42 0.15 16 37 H 0.02 0.57 8.14 -51.93 -0.42 0.15 16 38 H 0.26 7.16 8.31 -40.82 -0.34 6.82 16 39 H 0.14 1.30 5.45 -52.48 -0.29 1.01 16 40 H 0.07 0.61 6.27 -51.93 -0.33 0.28 16 41 H 0.07 0.49 8.14 -51.93 -0.42 0.07 16 42 H 0.07 0.38 8.14 -51.93 -0.42 -0.04 16 43 H 0.06 0.49 6.97 -51.93 -0.36 0.12 16 44 H 0.08 0.38 8.14 -51.93 -0.42 -0.04 16 45 H 0.06 0.48 8.14 -51.93 -0.42 0.06 16 46 H 0.07 0.46 8.14 -51.93 -0.42 0.03 16 LS Contribution 380.71 15.07 5.74 5.74 Total: -1.00 -33.43 380.71 -8.26 -41.69 By element: Atomic # 1 Polarization: 11.88 SS G_CDS: -6.91 Total: 4.98 kcal Atomic # 6 Polarization: -0.07 SS G_CDS: -1.76 Total: -1.83 kcal Atomic # 7 Polarization: -47.21 SS G_CDS: 0.30 Total: -46.91 kcal Atomic # 8 Polarization: -19.24 SS G_CDS: -0.61 Total: -19.85 kcal Atomic # 14 Polarization: 21.20 SS G_CDS: -5.02 Total: 16.18 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -33.43 -8.26 -41.69 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000274033518.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.857 kcal (2) G-P(sol) polarization free energy of solvation -33.428 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.285 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.263 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.691 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.548 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds