Wall clock time and date at job start Tue Mar 31 2020 13:43:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.53001 * 109.46770 * 2 1 4 4 N 1.46504 * 109.46892 * 180.02562 * 3 2 1 5 5 C 1.36957 * 119.99925 * 96.86467 * 4 3 2 6 6 H 1.07996 * 119.99599 * 165.07229 * 5 4 3 7 7 C 1.38984 * 119.99940 * 345.07651 * 5 4 3 8 8 N 1.31406 * 120.00311 * 341.04205 * 7 5 4 9 9 Si 1.86809 * 119.99840 * 161.04665 * 7 5 4 10 10 H 1.48497 * 109.46898 * 0.02562 * 9 7 5 11 11 H 1.48497 * 109.46837 * 119.99661 * 9 7 5 12 12 H 1.48498 * 109.47240 * 239.99598 * 9 7 5 13 13 C 1.34778 * 119.99810 * 276.86693 * 4 3 2 14 14 O 1.21623 * 119.99837 * 186.39477 * 13 4 3 15 15 C 1.47430 * 119.99988 * 6.39317 * 13 4 3 16 16 C 1.36675 * 125.77774 * 182.07081 * 15 13 4 17 17 N 1.34840 * 106.82335 * 179.71864 * 16 15 13 18 18 C 1.46500 * 126.58596 * 180.25709 * 17 16 15 19 19 C 1.50706 * 109.46957 * 125.00156 * 18 17 16 20 20 O 1.20760 * 119.99683 * 0.02562 * 19 18 17 21 21 C 1.50694 * 120.00284 * 179.97438 * 19 18 17 22 22 C 1.53001 * 109.47400 * 179.97438 * 21 19 18 23 23 C 1.53001 * 109.47068 * 300.00063 * 21 19 18 24 24 C 1.52995 * 109.47227 * 60.00012 * 21 19 18 25 25 N 1.40201 * 106.82017 * 0.25957 * 17 16 15 26 26 N 1.28756 * 108.38623 * 0.02562 * 25 17 16 27 27 H 1.09002 * 109.46925 * 180.02562 * 1 2 3 28 28 H 1.08998 * 109.46696 * 299.99633 * 1 2 3 29 29 H 1.08994 * 109.47747 * 60.00097 * 1 2 3 30 30 H 1.09006 * 109.46860 * 240.00047 * 2 1 3 31 31 H 1.09002 * 109.47422 * 119.99898 * 2 1 3 32 32 H 1.08995 * 109.46933 * 60.00248 * 3 2 1 33 33 H 1.09002 * 109.47064 * 300.00117 * 3 2 1 34 34 H 0.96995 * 119.99930 * 179.97438 * 8 7 5 35 35 H 1.08000 * 126.58459 * 359.97438 * 16 15 13 36 36 H 1.09000 * 109.47639 * 244.99691 * 18 17 16 37 37 H 1.09001 * 109.47632 * 5.00196 * 18 17 16 38 38 H 1.08999 * 109.46949 * 59.99619 * 22 21 19 39 39 H 1.08997 * 109.47375 * 179.97438 * 22 21 19 40 40 H 1.08995 * 109.46805 * 299.99964 * 22 21 19 41 41 H 1.09002 * 109.47403 * 59.99806 * 23 21 19 42 42 H 1.09001 * 109.47089 * 179.97438 * 23 21 19 43 43 H 1.09000 * 109.47256 * 299.99774 * 23 21 19 44 44 H 1.08995 * 109.47303 * 59.99837 * 24 21 19 45 45 H 1.09001 * 109.47366 * 180.02562 * 24 21 19 46 46 H 1.09003 * 109.47336 * 299.99908 * 24 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 7 3.5050 1.4426 -0.0006 5 6 4.1893 1.5845 -1.1785 6 1 5.2419 1.8256 -1.1657 7 6 3.5290 1.4184 -2.3901 8 7 2.3831 0.7764 -2.4314 9 14 4.2705 2.1077 -3.9601 10 1 5.5561 2.7812 -3.6461 11 1 4.5136 1.0010 -4.9200 12 1 3.3315 3.0879 -4.5622 13 6 4.1793 1.3029 1.1579 14 8 5.3899 1.4190 1.1747 15 6 3.4495 1.0093 2.4049 16 6 4.0070 0.8842 3.6465 17 7 2.9985 0.6231 4.5026 18 6 3.1121 0.4156 5.9483 19 6 2.1983 1.3748 6.6668 20 8 1.5217 2.1512 6.0361 21 6 2.1280 1.3643 8.1720 22 6 1.1336 2.4272 8.6437 23 6 1.6679 -0.0139 8.6515 24 6 3.5116 1.6693 8.7494 25 7 1.8205 0.5883 3.7432 26 7 2.1236 0.8157 2.5127 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8899 30 1 1.8933 -0.5139 -0.8900 31 1 1.8934 -0.5138 0.8900 32 1 1.6766 1.9563 0.8900 33 1 1.6766 1.9564 -0.8900 34 1 1.9222 0.6608 -3.2769 35 1 5.0537 0.9806 3.8948 36 1 2.8280 -0.6082 6.1920 37 1 4.1414 0.5912 6.2610 38 1 0.1478 2.2103 8.2323 39 1 1.0824 2.4193 9.7324 40 1 1.4619 3.4088 8.3021 41 1 2.3766 -0.7708 8.3156 42 1 1.6175 -0.0216 9.7403 43 1 0.6821 -0.2312 8.2403 44 1 3.8395 2.6511 8.4078 45 1 3.4609 1.6613 9.8382 46 1 4.2205 0.9124 8.4135 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000266093651.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:43:48 Heat of formation + Delta-G solvation = 44.772414 kcal Electronic energy + Delta-G solvation = -28079.052938 eV Core-core repulsion = 24200.485484 eV Total energy + Delta-G solvation = -3878.567454 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 322.179 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -41.69005 -40.22867 -38.14858 -36.16812 -35.20436 -34.26908 -32.12073 -31.16655 -30.30135 -28.99273 -27.85752 -27.33974 -25.72056 -24.57190 -23.71422 -22.31745 -21.49406 -20.42184 -19.52527 -18.67968 -17.36294 -16.72189 -16.65774 -15.92097 -15.43240 -15.32818 -14.86695 -14.59444 -14.33401 -14.16021 -14.11951 -13.73242 -13.47532 -13.29076 -12.86355 -12.77798 -12.71743 -12.61815 -12.45918 -12.15954 -12.02409 -11.66985 -11.51633 -11.41914 -11.37856 -11.23878 -10.91753 -10.74424 -10.48797 -10.28625 -10.24919 -10.13886 -9.80834 -9.62547 -9.26713 -8.73001 -8.58160 -8.45966 -7.56892 -6.25218 -3.75055 1.58067 1.63894 2.27842 2.59150 3.22449 3.29180 3.36432 3.41021 4.12475 4.17491 4.27132 4.40171 4.41476 4.46087 4.72497 4.83616 4.92229 4.94793 5.06259 5.16532 5.23008 5.24451 5.36011 5.42808 5.46349 5.49950 5.64288 5.71974 5.74799 5.80534 5.86703 6.25470 6.39156 6.48030 6.66615 6.72025 6.84951 7.11582 7.15498 7.16885 7.26448 7.52273 7.66087 8.03198 8.16601 8.50380 8.68880 9.21758 9.48417 10.05288 10.69108 Molecular weight = 322.18amu Principal moments of inertia in cm(-1) A = 0.025314 B = 0.003016 C = 0.002830 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1105.834394 B = 9280.834499 C = 9892.052971 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C -0.112 4.112 3 C 0.134 3.866 4 N -0.415 5.415 5 C -0.302 4.302 6 H 0.105 0.895 7 C 0.031 3.969 8 N -0.853 5.853 9 Si 0.924 3.076 10 H -0.268 1.268 11 H -0.282 1.282 12 H -0.280 1.280 13 C 0.506 3.494 14 O -0.599 6.599 15 C -0.056 4.056 16 C 0.058 3.942 17 N -0.372 5.372 18 C 0.077 3.923 19 C 0.347 3.653 20 O -0.409 6.409 21 C -0.108 4.108 22 C -0.135 4.135 23 C -0.142 4.142 24 C -0.143 4.143 25 N -0.070 5.070 26 N -0.193 5.193 27 H 0.033 0.967 28 H 0.040 0.960 29 H 0.046 0.954 30 H 0.095 0.905 31 H 0.036 0.964 32 H 0.050 0.950 33 H 0.088 0.912 34 H 0.267 0.733 35 H 0.196 0.804 36 H 0.124 0.876 37 H 0.131 0.869 38 H 0.063 0.937 39 H 0.064 0.936 40 H 0.061 0.939 41 H 0.064 0.936 42 H 0.071 0.929 43 H 0.063 0.937 44 H 0.062 0.938 45 H 0.071 0.929 46 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.589 -2.040 21.908 22.060 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 C -0.150 4.150 3 C 0.011 3.989 4 N -0.129 5.129 5 C -0.431 4.431 6 H 0.123 0.877 7 C -0.174 4.174 8 N -0.492 5.492 9 Si 0.751 3.249 10 H -0.192 1.192 11 H -0.208 1.208 12 H -0.206 1.206 13 C 0.293 3.707 14 O -0.486 6.486 15 C -0.194 4.194 16 C -0.096 4.096 17 N -0.160 5.160 18 C -0.047 4.047 19 C 0.217 3.783 20 O -0.277 6.277 21 C -0.109 4.109 22 C -0.192 4.192 23 C -0.199 4.199 24 C -0.200 4.200 25 N -0.049 5.049 26 N -0.067 5.067 27 H 0.052 0.948 28 H 0.059 0.941 29 H 0.065 0.935 30 H 0.113 0.887 31 H 0.055 0.945 32 H 0.068 0.932 33 H 0.106 0.894 34 H 0.078 0.922 35 H 0.212 0.788 36 H 0.142 0.858 37 H 0.148 0.852 38 H 0.082 0.918 39 H 0.083 0.917 40 H 0.080 0.920 41 H 0.083 0.917 42 H 0.090 0.910 43 H 0.082 0.918 44 H 0.081 0.919 45 H 0.090 0.910 46 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges -3.039 -1.793 21.426 21.715 hybrid contribution 1.273 0.215 -0.525 1.393 sum -1.767 -1.577 20.902 21.035 Atomic orbital electron populations 1.21514 0.97767 0.99337 1.00203 1.21788 0.93702 0.97916 1.01613 1.21549 0.79235 0.97736 1.00415 1.43697 1.06257 1.57845 1.05102 1.19822 0.96315 1.45110 0.81817 0.87703 1.25336 0.96499 0.96152 0.99396 1.70136 1.16310 1.36082 1.26661 0.85903 0.79272 0.78788 0.80968 1.19193 1.20818 1.20598 1.16523 0.86021 0.86173 0.81991 1.90593 1.13135 1.59094 1.85749 1.22018 0.89733 1.11614 0.96061 1.23150 0.95534 1.01272 0.89684 1.49920 1.07512 1.51113 1.07421 1.22283 1.03496 1.02534 0.76337 1.24708 0.80434 0.81870 0.91331 1.90524 1.34981 1.32986 1.69237 1.21149 0.98573 0.98733 0.92463 1.21727 0.98678 0.97862 1.00929 1.21889 1.02014 0.93763 1.02265 1.21898 0.93820 1.02373 1.01918 1.81974 1.03904 1.22416 0.96630 1.75045 1.13131 1.09546 1.08994 0.94807 0.94091 0.93523 0.88728 0.94509 0.93215 0.89374 0.92215 0.78756 0.85839 0.85152 0.91818 0.91732 0.91957 0.91690 0.91040 0.91763 0.91882 0.90966 0.91665 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.64 9.91 37.16 0.37 -2.27 16 2 C -0.11 -2.63 5.02 -26.73 -0.13 -2.76 16 3 C 0.13 3.35 4.15 -4.04 -0.02 3.33 16 4 N -0.41 -11.28 2.64 -116.02 -0.31 -11.59 16 5 C -0.30 -8.54 9.41 -14.99 -0.14 -8.68 16 6 H 0.11 3.08 7.30 -52.49 -0.38 2.69 16 7 C 0.03 0.80 4.97 -17.46 -0.09 0.71 16 8 N -0.85 -22.22 8.32 55.50 0.46 -21.76 16 9 Si 0.92 20.61 29.59 -169.99 -5.03 15.58 16 10 H -0.27 -6.01 7.11 56.52 0.40 -5.61 16 11 H -0.28 -6.24 7.11 56.52 0.40 -5.84 16 12 H -0.28 -6.15 7.11 56.52 0.40 -5.75 16 13 C 0.51 13.34 7.56 -12.52 -0.09 13.25 16 14 O -0.60 -16.95 16.49 5.26 0.09 -16.86 16 15 C -0.06 -1.26 6.39 -83.55 -0.53 -1.79 16 16 C 0.06 1.00 11.28 -16.80 -0.19 0.81 16 17 N -0.37 -5.76 3.41 -62.21 -0.21 -5.97 16 18 C 0.08 0.71 6.29 -5.19 -0.03 0.67 16 19 C 0.35 3.58 6.00 -29.03 -0.17 3.41 16 20 O -0.41 -6.30 15.35 6.00 0.09 -6.20 16 21 C -0.11 -0.71 0.87 -155.66 -0.14 -0.85 16 22 C -0.13 -1.01 7.76 37.16 0.29 -0.72 16 23 C -0.14 -0.69 8.26 37.16 0.31 -0.38 16 24 C -0.14 -0.65 8.25 37.16 0.31 -0.35 16 25 N -0.07 -1.36 12.89 60.35 0.78 -0.58 16 26 N -0.19 -4.24 6.88 32.84 0.23 -4.01 16 27 H 0.03 0.62 8.14 -51.93 -0.42 0.20 16 28 H 0.04 0.80 8.14 -51.93 -0.42 0.38 16 29 H 0.05 0.93 8.14 -51.93 -0.42 0.51 16 30 H 0.09 2.47 6.02 -51.93 -0.31 2.15 16 31 H 0.04 0.88 6.00 -51.93 -0.31 0.57 16 32 H 0.05 1.22 5.99 -51.93 -0.31 0.91 16 33 H 0.09 2.31 6.08 -51.93 -0.32 2.00 16 34 H 0.27 6.56 8.31 -40.82 -0.34 6.23 16 35 H 0.20 2.72 8.06 -52.49 -0.42 2.29 16 36 H 0.12 0.82 7.38 -51.93 -0.38 0.44 16 37 H 0.13 0.70 7.32 -51.93 -0.38 0.32 16 38 H 0.06 0.56 8.10 -51.93 -0.42 0.14 16 39 H 0.06 0.35 8.14 -51.93 -0.42 -0.07 16 40 H 0.06 0.54 8.10 -51.93 -0.42 0.12 16 41 H 0.06 0.22 7.28 -51.93 -0.38 -0.15 16 42 H 0.07 0.26 8.14 -51.93 -0.42 -0.16 16 43 H 0.06 0.38 8.14 -51.93 -0.42 -0.05 16 44 H 0.06 0.34 8.14 -51.93 -0.42 -0.08 16 45 H 0.07 0.25 8.14 -51.93 -0.42 -0.17 16 46 H 0.06 0.20 7.29 -51.93 -0.38 -0.18 16 LS Contribution 371.38 15.07 5.60 5.60 Total: -1.00 -35.03 371.38 -5.51 -40.54 By element: Atomic # 1 Polarization: 7.82 SS G_CDS: -6.93 Total: 0.89 kcal Atomic # 6 Polarization: 4.65 SS G_CDS: -0.27 Total: 4.38 kcal Atomic # 7 Polarization: -44.86 SS G_CDS: 0.95 Total: -43.92 kcal Atomic # 8 Polarization: -23.25 SS G_CDS: 0.18 Total: -23.07 kcal Atomic # 14 Polarization: 20.61 SS G_CDS: -5.03 Total: 15.58 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -35.03 -5.51 -40.54 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000266093651.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.310 kcal (2) G-P(sol) polarization free energy of solvation -35.025 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.285 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.512 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.537 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.772 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds