Wall clock time and date at job start Tue Mar 31 2020 14:15:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 N 1.46498 * 109.47001 * 2 1 4 4 C 1.46502 * 120.00068 * 269.99910 * 3 2 1 5 5 C 1.53007 * 109.47305 * 270.00241 * 4 3 2 6 6 N 1.46493 * 109.47301 * 179.97438 * 5 4 3 7 7 C 1.36933 * 120.00149 * 179.97438 * 6 5 4 8 8 H 1.08004 * 120.00067 * 359.97438 * 7 6 5 9 9 C 1.38817 * 120.00418 * 180.02562 * 7 6 5 10 10 N 1.31618 * 120.00189 * 179.97438 * 9 7 6 11 11 Si 1.86803 * 119.99466 * 359.97438 * 9 7 6 12 12 H 1.48498 * 109.46853 * 90.00580 * 11 9 7 13 13 H 1.48505 * 109.46854 * 210.00421 * 11 9 7 14 14 H 1.48493 * 109.47452 * 330.00231 * 11 9 7 15 15 C 1.34779 * 120.00375 * 90.00146 * 3 2 1 16 16 O 1.21279 * 120.00429 * 179.97438 * 15 3 2 17 17 C 1.50700 * 119.99485 * 359.97438 * 15 3 2 18 18 C 1.50701 * 109.46999 * 179.97438 * 17 15 3 19 19 C 1.38235 * 120.82038 * 90.00019 * 18 17 15 20 20 C 1.50694 * 120.41452 * 359.70494 * 19 18 17 21 21 N 1.32493 * 119.17503 * 179.97438 * 19 18 17 22 22 C 1.31790 * 120.96426 * 359.97438 * 21 19 18 23 23 C 1.50700 * 119.09506 * 179.97438 * 22 21 19 24 24 N 1.31772 * 121.81321 * 0.02562 * 22 21 19 25 25 C 1.32820 * 120.71491 * 359.97438 * 24 22 21 26 26 O 1.35520 * 120.50710 * 180.02562 * 25 24 22 27 27 H 1.09001 * 109.46677 * 59.99803 * 1 2 3 28 28 H 1.08998 * 109.46822 * 179.97438 * 1 2 3 29 29 H 1.08999 * 109.46809 * 300.00092 * 1 2 3 30 30 H 1.09002 * 109.46905 * 240.00434 * 2 1 3 31 31 H 1.08999 * 109.47234 * 119.99684 * 2 1 3 32 32 H 1.08994 * 109.47380 * 29.99836 * 4 3 2 33 33 H 1.09000 * 109.47120 * 150.00237 * 4 3 2 34 34 H 1.09004 * 109.46605 * 300.00085 * 5 4 3 35 35 H 1.09000 * 109.47034 * 59.99943 * 5 4 3 36 36 H 0.97001 * 119.99834 * 0.02562 * 6 5 4 37 37 H 0.96997 * 119.99571 * 179.97438 * 10 9 7 38 38 H 1.09008 * 109.47255 * 59.99961 * 17 15 3 39 39 H 1.09004 * 109.47339 * 300.00139 * 17 15 3 40 40 H 1.09002 * 109.47680 * 89.99885 * 20 19 18 41 41 H 1.08998 * 109.47223 * 209.99881 * 20 19 18 42 42 H 1.09000 * 109.47061 * 329.99607 * 20 19 18 43 43 H 1.08998 * 109.47308 * 270.00152 * 23 22 21 44 44 H 1.08999 * 109.46870 * 30.00157 * 23 22 21 45 45 H 1.09003 * 109.47144 * 149.99915 * 23 22 21 46 46 H 0.96700 * 114.00371 * 269.97527 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.2625 2.0718 -1.2687 5 6 3.7076 1.8314 -1.7105 6 7 3.9516 2.5215 -2.9794 7 6 5.1838 2.4493 -3.5722 8 1 5.9761 1.8839 -3.1040 9 6 5.4153 3.1037 -4.7744 10 7 6.5999 3.0347 -5.3439 11 14 4.0453 4.0821 -5.5839 12 1 4.0855 5.4849 -5.0985 13 1 4.2274 4.0628 -7.0576 14 1 2.7340 3.4764 -5.2392 15 6 2.2430 2.0166 1.1672 16 8 2.6477 3.1599 1.1672 17 6 1.9913 1.3064 2.4723 18 6 2.3185 2.2294 3.6177 19 6 1.3533 3.0597 4.1561 20 6 -0.0475 3.0616 3.6006 21 7 1.6765 3.8578 5.1630 22 6 2.8995 3.8685 5.6542 23 6 3.2211 4.7935 6.7996 24 7 3.8490 3.0934 5.1706 25 6 3.6013 2.2663 4.1613 26 8 4.5809 1.4706 3.6676 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5139 0.8900 30 1 1.8934 -0.5138 -0.8901 31 1 1.8934 -0.5138 0.8900 32 1 1.5818 1.6877 -2.0284 33 1 2.0956 3.1411 -1.1384 34 1 4.3884 2.2155 -0.9508 35 1 3.8745 0.7622 -1.8408 36 1 3.2404 3.0302 -3.3994 37 1 6.7614 3.4916 -6.1841 38 1 2.6212 0.4186 2.5302 39 1 0.9432 1.0125 2.5298 40 1 -0.6498 2.3240 4.1309 41 1 -0.4880 4.0504 3.7290 42 1 -0.0181 2.8120 2.5400 43 1 3.5603 5.7525 6.4080 44 1 2.3283 4.9443 7.4065 45 1 4.0071 4.3529 7.4128 46 1 5.0899 1.8723 2.9502 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001699216310.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:15:23 Heat of formation + Delta-G solvation = -15.076544 kcal Electronic energy + Delta-G solvation = -27661.840779 eV Core-core repulsion = 23780.678080 eV Total energy + Delta-G solvation = -3881.162700 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 322.179 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.66160 -39.97015 -37.90962 -36.47320 -35.24014 -34.79902 -33.04012 -31.94026 -30.78610 -30.62203 -29.36489 -28.25845 -26.35633 -23.80949 -23.59336 -23.12819 -22.02880 -21.36955 -19.18637 -18.93968 -18.26546 -17.68860 -17.28726 -16.48146 -16.12577 -15.43641 -15.17844 -14.70977 -14.38734 -14.24460 -14.09497 -13.98469 -13.85113 -13.68691 -13.53866 -13.48552 -13.10320 -12.82734 -12.69590 -12.64852 -12.38076 -12.35429 -12.13334 -12.05168 -11.60784 -11.38502 -11.20016 -11.11009 -10.86324 -10.76513 -10.49592 -10.20189 -10.00305 -9.62823 -9.48919 -9.24932 -8.92696 -8.71827 -7.27866 -5.78972 -3.15544 0.56906 0.77540 2.51245 2.84812 3.07055 3.35194 3.39204 3.43949 3.47095 3.66079 4.04368 4.34237 4.36760 4.46884 4.57151 4.68299 4.80990 4.90477 4.94957 5.10185 5.15032 5.16844 5.22481 5.28426 5.31316 5.34875 5.40450 5.49145 5.50061 5.54488 5.58977 5.62356 5.69666 5.71157 5.88054 5.92268 6.10406 6.35890 6.57038 6.72519 6.74002 7.14566 7.31042 7.87731 7.95266 8.08811 8.39240 9.17441 9.89630 10.08507 11.39308 Molecular weight = 322.18amu Principal moments of inertia in cm(-1) A = 0.014539 B = 0.003091 C = 0.002843 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1925.457373 B = 9055.857122 C = 9844.869129 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C 0.099 3.901 3 N -0.604 5.604 4 C 0.104 3.896 5 C 0.148 3.852 6 N -0.753 5.753 7 C -0.245 4.245 8 H 0.090 0.910 9 C 0.005 3.995 10 N -0.933 5.933 11 Si 0.886 3.114 12 H -0.283 1.283 13 H -0.290 1.290 14 H -0.277 1.277 15 C 0.513 3.487 16 O -0.530 6.530 17 C -0.091 4.091 18 C -0.192 4.192 19 C 0.204 3.796 20 C -0.109 4.109 21 N -0.526 5.526 22 C 0.342 3.658 23 C -0.084 4.084 24 N -0.542 5.542 25 C 0.381 3.619 26 O -0.477 6.477 27 H 0.061 0.939 28 H 0.069 0.931 29 H 0.055 0.945 30 H 0.087 0.913 31 H 0.080 0.920 32 H 0.077 0.923 33 H 0.083 0.917 34 H 0.029 0.971 35 H 0.026 0.974 36 H 0.361 0.639 37 H 0.260 0.740 38 H 0.113 0.887 39 H 0.108 0.892 40 H 0.088 0.912 41 H 0.087 0.913 42 H 0.079 0.921 43 H 0.088 0.912 44 H 0.087 0.913 45 H 0.086 0.914 46 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -16.155 -5.460 21.910 27.764 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C -0.024 4.024 3 N -0.338 5.338 4 C -0.019 4.019 5 C 0.020 3.980 6 N -0.400 5.400 7 C -0.374 4.374 8 H 0.107 0.893 9 C -0.191 4.191 10 N -0.581 5.581 11 Si 0.716 3.284 12 H -0.210 1.210 13 H -0.217 1.217 14 H -0.204 1.204 15 C 0.301 3.699 16 O -0.406 6.406 17 C -0.132 4.132 18 C -0.198 4.198 19 C 0.059 3.941 20 C -0.166 4.166 21 N -0.243 5.243 22 C 0.074 3.926 23 C -0.143 4.143 24 N -0.267 5.267 25 C 0.194 3.806 26 O -0.286 6.286 27 H 0.080 0.920 28 H 0.087 0.913 29 H 0.074 0.926 30 H 0.105 0.895 31 H 0.098 0.902 32 H 0.095 0.905 33 H 0.102 0.898 34 H 0.047 0.953 35 H 0.044 0.956 36 H 0.193 0.807 37 H 0.070 0.930 38 H 0.131 0.869 39 H 0.126 0.874 40 H 0.106 0.894 41 H 0.106 0.894 42 H 0.098 0.902 43 H 0.107 0.893 44 H 0.106 0.894 45 H 0.105 0.895 46 H 0.275 0.725 Dipole moment (debyes) X Y Z Total from point charges -15.634 -4.755 22.956 28.178 hybrid contribution -0.671 0.263 -1.902 2.034 sum -16.305 -4.492 21.053 27.005 Atomic orbital electron populations 1.22231 0.95797 1.02448 1.02571 1.21667 0.94413 0.82387 1.03946 1.47911 1.65549 1.14335 1.05991 1.21736 0.98191 0.98391 0.83544 1.20872 0.92694 0.95868 0.88608 1.42554 1.12422 1.61859 1.23123 1.19017 0.88223 1.27265 1.02928 0.89253 1.24677 0.96468 1.00339 0.97609 1.69701 1.20920 1.47800 1.19687 0.86526 0.82175 0.80699 0.78981 1.20980 1.21652 1.20354 1.20413 0.77844 0.86735 0.84935 1.90762 1.44910 1.17750 1.87180 1.20538 1.04791 0.98357 0.89545 1.20926 0.95479 1.02709 1.00668 1.21421 0.96371 0.87503 0.88783 1.20817 0.90145 1.04647 1.00959 1.68110 1.20718 1.23085 1.12380 1.23022 0.83585 0.91521 0.94432 1.20591 1.03335 0.97079 0.93272 1.67803 1.37831 1.07537 1.13562 1.19168 0.86965 0.85984 0.88479 1.84593 1.48190 1.39681 1.56107 0.91963 0.91252 0.92606 0.89458 0.90210 0.90474 0.89826 0.95272 0.95563 0.80674 0.92991 0.86874 0.87412 0.89394 0.89432 0.90216 0.89348 0.89431 0.89514 0.72511 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.09 10.24 37.16 0.38 -0.71 16 2 C 0.10 0.80 5.93 -4.04 -0.02 0.77 16 3 N -0.60 -7.18 2.47 -173.68 -0.43 -7.61 16 4 C 0.10 1.57 5.52 -4.04 -0.02 1.55 16 5 C 0.15 2.88 6.58 -4.04 -0.03 2.85 16 6 N -0.75 -18.15 5.41 -59.91 -0.32 -18.47 16 7 C -0.24 -7.04 10.47 -15.06 -0.16 -7.19 16 8 H 0.09 2.75 8.06 -52.48 -0.42 2.33 16 9 C 0.00 0.15 5.50 -17.43 -0.10 0.05 16 10 N -0.93 -29.59 13.97 55.49 0.78 -28.81 16 11 Si 0.89 22.23 27.73 -169.99 -4.71 17.51 16 12 H -0.28 -7.12 7.11 56.52 0.40 -6.72 16 13 H -0.29 -7.33 7.11 56.52 0.40 -6.92 16 14 H -0.28 -6.44 6.52 56.52 0.37 -6.07 16 15 C 0.51 6.59 7.34 -10.98 -0.08 6.51 16 16 O -0.53 -9.20 15.61 5.56 0.09 -9.11 16 17 C -0.09 -0.86 3.55 -29.03 -0.10 -0.96 16 18 C -0.19 -2.27 4.42 -104.20 -0.46 -2.73 16 19 C 0.20 2.38 6.82 -82.31 -0.56 1.82 16 20 C -0.11 -0.89 9.45 36.00 0.34 -0.55 16 21 N -0.53 -6.64 10.27 -7.05 -0.07 -6.71 16 22 C 0.34 4.26 7.64 -157.22 -1.20 3.06 16 23 C -0.08 -0.71 10.32 36.01 0.37 -0.34 16 24 N -0.54 -7.52 10.36 -10.78 -0.11 -7.64 16 25 C 0.38 5.05 7.81 -16.70 -0.13 4.92 16 26 O -0.48 -5.63 12.75 -18.25 -0.23 -5.86 16 27 H 0.06 0.46 8.14 -51.93 -0.42 0.04 16 28 H 0.07 0.33 8.14 -51.93 -0.42 -0.09 16 29 H 0.05 0.32 7.22 -51.93 -0.37 -0.06 16 30 H 0.09 0.73 8.07 -51.93 -0.42 0.31 16 31 H 0.08 0.49 6.44 -51.93 -0.33 0.15 16 32 H 0.08 1.05 8.07 -51.93 -0.42 0.63 16 33 H 0.08 1.41 7.42 -51.93 -0.39 1.03 16 34 H 0.03 0.62 8.14 -51.93 -0.42 0.20 16 35 H 0.03 0.50 8.14 -51.93 -0.42 0.08 16 36 H 0.36 8.39 5.53 -40.82 -0.23 8.17 16 37 H 0.26 7.82 8.31 -40.82 -0.34 7.48 16 38 H 0.11 0.92 6.89 -51.92 -0.36 0.56 16 39 H 0.11 0.71 5.87 -51.93 -0.31 0.40 16 40 H 0.09 0.51 8.14 -51.93 -0.42 0.08 16 41 H 0.09 0.71 8.14 -51.93 -0.42 0.29 16 42 H 0.08 0.64 6.54 -51.93 -0.34 0.30 16 43 H 0.09 0.67 8.14 -51.93 -0.42 0.25 16 44 H 0.09 0.60 8.14 -51.93 -0.42 0.18 16 45 H 0.09 0.64 8.14 -51.93 -0.42 0.22 16 46 H 0.41 3.88 9.06 45.56 0.41 4.29 16 LS Contribution 381.66 15.07 5.75 5.75 Total: -1.00 -37.61 381.66 -7.19 -44.79 By element: Atomic # 1 Polarization: 13.26 SS G_CDS: -6.14 Total: 7.12 kcal Atomic # 6 Polarization: 10.82 SS G_CDS: -1.77 Total: 9.05 kcal Atomic # 7 Polarization: -69.09 SS G_CDS: -0.16 Total: -69.25 kcal Atomic # 8 Polarization: -14.83 SS G_CDS: -0.15 Total: -14.98 kcal Atomic # 14 Polarization: 22.23 SS G_CDS: -4.71 Total: 17.51 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -37.61 -7.19 -44.79 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001699216310.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.716 kcal (2) G-P(sol) polarization free energy of solvation -37.605 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.889 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.187 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.793 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.077 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds