Wall clock time and date at job start Tue Mar 31 2020 13:56:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34231 * 116.99758 * 2 1 4 4 O 1.20819 * 120.00030 * 0.02562 * 3 2 1 5 5 C 1.50700 * 119.99829 * 179.97438 * 3 2 1 6 6 N 1.46496 * 109.47077 * 180.02562 * 5 3 2 7 7 C 1.37104 * 120.00091 * 96.23052 * 6 5 3 8 8 H 1.08004 * 120.00188 * 154.32203 * 7 6 5 9 9 C 1.38952 * 119.99761 * 334.32249 * 7 6 5 10 10 N 1.31408 * 119.99917 * 3.67911 * 9 7 6 11 11 Si 1.86797 * 120.00089 * 183.67736 * 9 7 6 12 12 H 1.48500 * 109.46901 * 90.00182 * 11 9 7 13 13 H 1.48499 * 109.47463 * 210.00190 * 11 9 7 14 14 H 1.48503 * 109.47131 * 330.00318 * 11 9 7 15 15 C 1.34783 * 120.00419 * 276.23466 * 6 5 3 16 16 O 1.21291 * 119.99700 * 359.97438 * 15 6 5 17 17 C 1.50693 * 120.00208 * 180.02562 * 15 6 5 18 18 C 1.53002 * 109.47296 * 176.94583 * 17 15 6 19 19 C 1.53002 * 115.55098 * 65.82770 * 18 17 15 20 20 C 1.53003 * 117.49371 * 280.16158 * 18 17 15 21 21 C 1.53000 * 117.49779 * 211.50639 * 18 17 15 22 22 Cl 1.80303 * 117.49660 * 214.97772 * 21 18 17 23 23 Cl 1.80302 * 117.50068 * 359.97438 * 21 18 17 24 24 H 1.09001 * 109.46850 * 299.98799 * 1 2 3 25 25 H 1.08999 * 109.47466 * 59.99442 * 1 2 3 26 26 H 1.09002 * 109.47086 * 179.97438 * 1 2 3 27 27 H 1.09007 * 109.46483 * 60.01015 * 5 3 2 28 28 H 1.08997 * 109.47814 * 300.01013 * 5 3 2 29 29 H 0.97003 * 120.00098 * 179.97438 * 10 9 7 30 30 H 1.09010 * 109.46757 * 296.93962 * 17 15 6 31 31 H 1.08993 * 109.47636 * 56.93924 * 17 15 6 32 32 H 1.09000 * 109.46608 * 55.86114 * 19 18 17 33 33 H 1.09002 * 109.46994 * 175.85279 * 19 18 17 34 34 H 1.08995 * 109.47316 * 295.85757 * 19 18 17 35 35 H 1.08993 * 117.49976 * 359.97438 * 20 18 17 36 36 H 1.08998 * 117.49328 * 144.99529 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 7 3.9816 2.6798 0.0011 7 6 4.2991 3.3004 1.1817 8 1 4.9738 4.1437 1.1841 9 6 3.7528 2.8442 2.3751 10 7 2.9897 1.7745 2.3819 11 14 4.1032 3.7517 3.9698 12 1 3.0684 4.7952 4.1831 13 1 4.0782 2.7910 5.1019 14 1 5.4416 4.3904 3.8921 15 6 4.0516 3.3623 -1.1590 16 8 3.7711 2.8133 -2.2035 17 6 4.4794 4.8073 -1.1585 18 6 4.5477 5.3195 -2.5986 19 6 3.2101 5.3894 -3.3383 20 6 5.7899 4.9621 -3.4173 21 6 5.5884 6.3948 -2.9174 22 17 5.1449 7.6472 -4.1363 23 17 6.6400 6.9619 -1.5670 24 1 -0.3633 0.5137 0.8901 25 1 -0.3634 0.5139 -0.8899 26 1 -0.3633 -1.0277 -0.0005 27 1 3.9563 0.7807 -0.8893 28 1 3.9558 0.7809 0.8907 29 1 2.6086 1.4558 3.2151 30 1 3.7576 5.3997 -0.5961 31 1 5.4617 4.8953 -0.6946 32 1 2.5110 6.0007 -2.7677 33 1 3.3618 5.8335 -4.3221 34 1 2.8048 4.3840 -3.4520 35 1 6.5585 4.3626 -2.9298 36 1 5.6542 4.7769 -4.4828 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000826100938.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:56:15 Heat of formation + Delta-G solvation = -97.050922 kcal Electronic energy + Delta-G solvation = -23939.496929 eV Core-core repulsion = 20091.378266 eV Total energy + Delta-G solvation = -3848.118662 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 323.052 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -39.63204 -38.91645 -37.62115 -35.89433 -35.71932 -35.21323 -34.59190 -31.60441 -29.74725 -28.38571 -27.44860 -26.08110 -24.52695 -22.18906 -20.66454 -19.49622 -18.89232 -17.06538 -16.60481 -16.33745 -15.90798 -15.51482 -15.27524 -14.86109 -14.39807 -14.07450 -13.94045 -13.38742 -12.98540 -12.67791 -12.58142 -12.38254 -12.23275 -11.91813 -11.55681 -11.46248 -11.33167 -11.26300 -11.24341 -11.08586 -11.05301 -10.84876 -10.64158 -10.51549 -10.33574 -9.85052 -9.81940 -9.58795 -9.52384 -9.04359 -8.57512 -7.96490 -6.51073 -4.14824 1.29257 2.35207 3.06403 3.15323 3.17340 3.35445 3.49405 3.68822 3.98512 4.04328 4.28541 4.58141 4.76568 4.95984 5.21790 5.30132 5.68028 5.72464 5.75632 5.86451 5.92566 6.00349 6.11418 6.17981 6.24873 6.26436 6.42919 6.48556 6.68395 6.83156 7.27077 7.45566 7.61713 8.19137 8.92814 9.08147 9.30053 9.70025 10.53042 Molecular weight = 323.05amu Principal moments of inertia in cm(-1) A = 0.014060 B = 0.004757 C = 0.003810 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1990.993939 B = 5884.893668 C = 7346.488964 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.043 3.957 2 O -0.374 6.374 3 C 0.488 3.512 4 O -0.510 6.510 5 C 0.156 3.844 6 N -0.432 5.432 7 C -0.331 4.331 8 H 0.102 0.898 9 C 0.043 3.957 10 N -0.883 5.883 11 Si 0.929 3.071 12 H -0.276 1.276 13 H -0.282 1.282 14 H -0.269 1.269 15 C 0.480 3.520 16 O -0.594 6.594 17 C -0.092 4.092 18 C -0.049 4.049 19 C -0.122 4.122 20 C -0.127 4.127 21 C -0.003 4.003 22 Cl -0.107 7.107 23 Cl -0.101 7.101 24 H 0.054 0.946 25 H 0.049 0.951 26 H 0.085 0.915 27 H 0.075 0.925 28 H 0.138 0.862 29 H 0.273 0.727 30 H 0.099 0.901 31 H 0.092 0.908 32 H 0.061 0.939 33 H 0.058 0.942 34 H 0.093 0.907 35 H 0.117 0.883 36 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.940 3.090 -6.095 7.439 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.051 4.051 2 O -0.291 6.291 3 C 0.330 3.670 4 O -0.395 6.395 5 C 0.030 3.970 6 N -0.151 5.151 7 C -0.458 4.458 8 H 0.120 0.880 9 C -0.161 4.161 10 N -0.522 5.522 11 Si 0.755 3.245 12 H -0.202 1.202 13 H -0.207 1.207 14 H -0.193 1.193 15 C 0.270 3.730 16 O -0.480 6.480 17 C -0.132 4.132 18 C -0.051 4.051 19 C -0.179 4.179 20 C -0.165 4.165 21 C -0.054 4.054 22 Cl -0.080 7.080 23 Cl -0.074 7.074 24 H 0.072 0.928 25 H 0.068 0.932 26 H 0.104 0.896 27 H 0.092 0.908 28 H 0.155 0.845 29 H 0.084 0.916 30 H 0.117 0.883 31 H 0.110 0.890 32 H 0.080 0.920 33 H 0.077 0.923 34 H 0.112 0.888 35 H 0.135 0.865 36 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges 2.528 3.159 -6.420 7.589 hybrid contribution -0.115 0.778 1.187 1.424 sum 2.413 3.938 -5.234 6.980 Atomic orbital electron populations 1.22926 0.78861 1.01808 1.01529 1.86468 1.21531 1.35543 1.85607 1.24033 0.92410 0.80416 0.70105 1.90503 1.66688 1.36466 1.45885 1.20608 0.86900 0.85608 1.03843 1.43299 1.57538 1.08141 1.06120 1.19655 1.27039 1.15778 0.83336 0.88040 1.25304 0.94718 0.96048 1.00051 1.69658 1.32021 1.22116 1.28408 0.85888 0.78922 0.79153 0.80502 1.20191 1.20749 1.19307 1.19921 0.81635 0.87640 0.83841 1.90518 1.55198 1.70424 1.31828 1.21089 1.04173 0.95554 0.92392 1.22041 0.92541 0.93083 0.97425 1.21509 0.93332 1.04423 0.98597 1.23977 1.00445 0.89852 1.02237 1.27409 1.02850 0.85531 0.89603 1.98710 1.92948 1.58797 1.57569 1.98730 1.69044 1.90839 1.48763 0.92762 0.93174 0.89607 0.90756 0.84491 0.91594 0.88275 0.88987 0.91959 0.92330 0.88838 0.86510 0.86529 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.74 10.56 101.05 1.07 1.81 16 2 O -0.37 -7.97 10.57 -39.26 -0.41 -8.38 16 3 C 0.49 11.83 6.10 36.01 0.22 12.05 16 4 O -0.51 -13.76 15.89 -18.74 -0.30 -14.06 16 5 C 0.16 3.62 5.13 -5.20 -0.03 3.60 16 6 N -0.43 -10.29 2.18 -116.09 -0.25 -10.54 16 7 C -0.33 -7.90 9.05 -14.93 -0.14 -8.04 16 8 H 0.10 2.27 6.56 -52.48 -0.34 1.93 16 9 C 0.04 1.02 5.34 -17.47 -0.09 0.93 16 10 N -0.88 -22.06 8.67 55.50 0.48 -21.58 16 11 Si 0.93 19.09 29.55 -169.99 -5.02 14.06 16 12 H -0.28 -5.84 7.11 56.52 0.40 -5.44 16 13 H -0.28 -5.79 7.11 56.52 0.40 -5.39 16 14 H -0.27 -5.32 7.11 56.52 0.40 -4.92 16 15 C 0.48 10.74 7.29 -10.99 -0.08 10.66 16 16 O -0.59 -14.02 14.04 5.55 0.08 -13.94 16 17 C -0.09 -1.72 3.85 -27.89 -0.11 -1.82 16 18 C -0.05 -0.79 1.63 -154.50 -0.25 -1.04 16 19 C -0.12 -1.93 9.06 37.16 0.34 -1.59 16 20 C -0.13 -1.79 9.66 -26.69 -0.26 -2.05 16 21 C 0.00 -0.04 3.61 -26.69 -0.10 -0.13 16 22 Cl -0.11 -1.42 27.58 -51.86 -1.43 -2.85 16 23 Cl -0.10 -1.44 27.55 -51.86 -1.43 -2.87 16 24 H 0.05 0.96 8.13 -51.93 -0.42 0.54 16 25 H 0.05 0.84 8.13 -51.93 -0.42 0.42 16 26 H 0.09 1.12 8.14 -51.93 -0.42 0.69 16 27 H 0.07 1.62 7.62 -51.93 -0.40 1.22 16 28 H 0.14 3.22 6.21 -51.93 -0.32 2.90 16 29 H 0.27 6.62 8.31 -40.82 -0.34 6.28 16 30 H 0.10 1.90 8.14 -51.92 -0.42 1.48 16 31 H 0.09 1.63 6.11 -51.93 -0.32 1.31 16 32 H 0.06 0.97 8.14 -51.93 -0.42 0.54 16 33 H 0.06 0.81 6.85 -51.93 -0.36 0.45 16 34 H 0.09 1.71 6.47 -51.93 -0.34 1.37 16 35 H 0.12 1.61 8.14 -51.93 -0.42 1.18 16 36 H 0.12 1.47 8.14 -51.93 -0.42 1.05 16 LS Contribution 333.73 15.07 5.03 5.03 Total: -1.00 -28.29 333.73 -6.85 -35.15 By element: Atomic # 1 Polarization: 9.78 SS G_CDS: -4.16 Total: 5.62 kcal Atomic # 6 Polarization: 13.80 SS G_CDS: 0.57 Total: 14.37 kcal Atomic # 7 Polarization: -32.35 SS G_CDS: 0.23 Total: -32.12 kcal Atomic # 8 Polarization: -35.75 SS G_CDS: -0.63 Total: -36.39 kcal Atomic # 14 Polarization: 19.09 SS G_CDS: -5.02 Total: 14.06 kcal Atomic # 17 Polarization: -2.86 SS G_CDS: -2.86 Total: -5.72 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -28.29 -6.85 -35.15 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000826100938.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.906 kcal (2) G-P(sol) polarization free energy of solvation -28.295 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.201 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.850 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.145 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.051 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds