Wall clock time and date at job start Tue Mar 31 2020 14:15:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.30997 * 1 3 3 C 1.50699 * 120.00408 * 2 1 4 4 N 1.46896 * 109.47219 * 123.20573 * 3 2 1 5 5 C 1.46907 * 111.00301 * 63.20358 * 4 3 2 6 6 C 1.50700 * 109.46621 * 66.04569 * 5 4 3 7 7 H 1.07993 * 120.00439 * 0.02562 * 6 5 4 8 8 C 1.37883 * 119.99768 * 180.02562 * 6 5 4 9 9 N 1.31508 * 119.99920 * 180.02562 * 8 6 5 10 10 Si 1.86802 * 119.99777 * 0.02562 * 8 6 5 11 11 H 1.48500 * 109.47087 * 89.99992 * 10 8 6 12 12 H 1.48498 * 109.46916 * 209.99796 * 10 8 6 13 13 H 1.48494 * 109.47329 * 329.99941 * 10 8 6 14 14 C 1.46900 * 110.99995 * 299.25249 * 4 3 2 15 15 C 1.50702 * 109.46966 * 288.28281 * 14 4 3 16 16 C 1.38242 * 119.94776 * 104.37752 * 15 14 4 17 17 C 1.38655 * 120.08294 * 179.83930 * 16 15 14 18 18 C 1.39015 * 119.83663 * 0.23022 * 17 16 15 19 19 C 1.38652 * 119.83752 * 359.97438 * 18 17 16 20 20 C 1.38315 * 119.95335 * 284.54735 * 15 14 4 21 21 Cl 1.73602 * 119.95280 * 0.03416 * 20 15 14 22 22 O 1.36109 * 120.77852 * 180.02562 * 18 17 16 23 23 C 1.43178 * 116.69496 * 342.73205 * 22 18 17 24 24 C 1.53478 * 108.23161 * 46.27255 * 23 22 18 25 25 O 1.36127 * 119.38543 * 179.97438 * 17 16 15 26 26 H 1.08004 * 119.99684 * 0.02562 * 1 2 3 27 27 H 1.07995 * 120.00434 * 180.02562 * 1 2 3 28 28 H 1.08004 * 119.99684 * 179.97438 * 2 1 3 29 29 H 1.09001 * 109.46982 * 3.20664 * 3 2 1 30 30 H 1.09003 * 109.47057 * 243.20544 * 3 2 1 31 31 H 1.08994 * 109.47029 * 186.04798 * 5 4 3 32 32 H 1.08997 * 109.46808 * 306.05053 * 5 4 3 33 33 H 0.97005 * 119.99635 * 179.97438 * 9 8 6 34 34 H 1.09001 * 109.47473 * 168.28952 * 14 4 3 35 35 H 1.09001 * 109.47304 * 48.28467 * 14 4 3 36 36 H 1.08004 * 119.95584 * 0.20310 * 16 15 14 37 37 H 1.08006 * 119.97343 * 179.97438 * 19 18 17 38 38 H 1.09003 * 109.70960 * 165.95547 * 23 22 18 39 39 H 1.09004 * 109.71378 * 286.58930 * 23 22 18 40 40 H 1.09003 * 109.70392 * 59.91818 * 24 23 22 41 41 H 1.09000 * 109.70865 * 180.53947 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0636 1.3050 0.0000 4 7 2.9652 1.3498 1.1588 5 6 3.9817 0.2924 1.0762 6 6 4.8905 0.5599 -0.0958 7 1 4.7295 1.4285 -0.7169 8 6 5.9277 -0.3046 -0.3752 9 7 6.7211 -0.0710 -1.3977 10 14 6.2059 -1.8076 0.6986 11 1 5.4333 -2.9537 0.1556 12 1 7.6516 -2.1465 0.7107 13 1 5.7538 -1.5174 2.0830 14 6 2.2114 1.2582 2.4163 15 6 1.4639 2.5459 2.6488 16 6 0.0998 2.6010 2.4314 17 6 -0.5912 3.7835 2.6476 18 6 0.0918 4.9148 3.0791 19 6 1.4607 4.8550 3.2915 20 6 2.1442 3.6718 3.0761 21 17 3.8581 3.5998 3.3429 22 8 -0.5675 6.0853 3.2978 23 6 -1.8699 6.2084 2.7160 24 6 -2.6496 4.9188 3.0069 25 8 -1.9342 3.8219 2.4285 26 1 -0.5400 0.9354 -0.0004 27 1 -0.5400 -0.9352 0.0004 28 1 1.8499 -0.9354 0.0004 29 1 1.3567 2.1328 0.0575 30 1 2.6464 1.3880 -0.9174 31 1 4.5679 0.2794 1.9950 32 1 3.4923 -0.6724 0.9437 33 1 7.4510 -0.6790 -1.5940 34 1 2.9016 1.0846 3.2419 35 1 1.5025 0.4324 2.3556 36 1 -0.4292 1.7203 2.0983 37 1 1.9936 5.7327 3.6263 38 1 -2.3899 7.0596 3.1555 39 1 -1.7796 6.3483 1.6387 40 1 -2.7338 4.7754 4.0841 41 1 -3.6441 4.9830 2.5652 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000292385257.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:15:03 Heat of formation + Delta-G solvation = -18.288291 kcal Electronic energy + Delta-G solvation = -25360.376762 eV Core-core repulsion = 21653.939447 eV Total energy + Delta-G solvation = -3706.437314 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 323.108 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -41.39447 -38.74359 -37.42182 -36.95065 -35.88349 -32.91523 -32.50631 -31.31617 -30.80682 -29.08609 -27.49138 -26.25098 -24.83437 -23.38688 -22.61129 -21.04036 -20.49583 -19.00728 -18.54989 -17.56504 -17.29468 -16.71753 -15.70751 -15.34351 -15.21799 -14.96827 -14.84062 -14.57300 -14.27979 -14.12304 -13.94691 -13.76353 -13.32063 -12.87268 -12.47415 -12.43815 -12.23539 -11.97237 -11.61317 -11.34165 -11.29937 -10.95981 -10.87832 -10.70687 -10.65141 -10.54990 -10.36327 -10.11942 -9.81092 -9.36310 -8.90878 -8.62152 -8.54227 -7.96879 -7.35973 -6.01806 -3.98231 1.14250 1.18444 2.34464 2.66433 2.84220 3.13352 3.29239 3.37789 3.39459 3.53669 3.96473 4.44345 4.45867 4.52095 4.60761 4.84127 4.96956 4.99966 5.14869 5.19080 5.27377 5.31370 5.39854 5.58747 5.63665 5.81368 5.87533 5.97310 6.00550 6.09108 6.33378 6.34459 6.48249 6.63554 6.69418 6.85185 6.95501 7.05103 7.16839 7.23716 7.63760 7.89782 8.04544 8.68279 9.07888 9.60030 11.11397 Molecular weight = 323.11amu Principal moments of inertia in cm(-1) A = 0.018550 B = 0.003886 C = 0.003445 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1509.099528 B = 7203.819140 C = 8125.225972 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.161 4.161 3 C 0.084 3.916 4 N -0.505 5.505 5 C 0.161 3.839 6 C -0.503 4.503 7 H 0.081 0.919 8 C 0.069 3.931 9 N -0.900 5.900 10 Si 0.871 3.129 11 H -0.279 1.279 12 H -0.287 1.287 13 H -0.266 1.266 14 C 0.086 3.914 15 C -0.050 4.050 16 C -0.099 4.099 17 C 0.050 3.950 18 C 0.053 3.947 19 C -0.110 4.110 20 C -0.008 4.008 21 Cl -0.038 7.038 22 O -0.306 6.306 23 C 0.021 3.979 24 C 0.021 3.979 25 O -0.305 6.305 26 H 0.091 0.909 27 H 0.087 0.913 28 H 0.110 0.890 29 H 0.061 0.939 30 H 0.098 0.902 31 H 0.029 0.971 32 H -0.012 1.012 33 H 0.263 0.737 34 H 0.084 0.916 35 H 0.044 0.956 36 H 0.141 0.859 37 H 0.142 0.858 38 H 0.121 0.879 39 H 0.078 0.922 40 H 0.076 0.924 41 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -18.864 9.618 10.543 23.654 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.251 4.251 2 C -0.180 4.180 3 C -0.044 4.044 4 N -0.227 5.227 5 C 0.035 3.965 6 C -0.541 4.541 7 H 0.099 0.901 8 C -0.132 4.132 9 N -0.540 5.540 10 Si 0.698 3.302 11 H -0.205 1.205 12 H -0.212 1.212 13 H -0.191 1.191 14 C -0.042 4.042 15 C -0.051 4.051 16 C -0.118 4.118 17 C 0.005 3.995 18 C 0.008 3.992 19 C -0.130 4.130 20 C -0.036 4.036 21 Cl -0.009 7.009 22 O -0.221 6.221 23 C -0.055 4.055 24 C -0.055 4.055 25 O -0.220 6.220 26 H 0.110 0.890 27 H 0.106 0.894 28 H 0.128 0.872 29 H 0.080 0.920 30 H 0.116 0.884 31 H 0.047 0.953 32 H 0.006 0.994 33 H 0.072 0.928 34 H 0.102 0.898 35 H 0.062 0.938 36 H 0.159 0.841 37 H 0.160 0.840 38 H 0.139 0.861 39 H 0.096 0.904 40 H 0.094 0.906 41 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -18.310 10.028 10.473 23.356 hybrid contribution -0.287 -1.530 0.449 1.620 sum -18.598 8.498 10.922 23.181 Atomic orbital electron populations 1.23721 0.95953 1.00911 1.04493 1.23887 0.96238 1.01389 0.96526 1.21360 0.94326 0.92357 0.96376 1.62241 1.12316 1.49363 0.98754 1.20231 0.90020 0.87753 0.98473 1.20992 1.11290 1.10802 1.11028 0.90068 1.24867 0.95781 0.97582 0.94995 1.69889 1.18107 1.37776 1.28203 0.86931 0.77545 0.83876 0.81817 1.20459 1.21249 1.19110 1.21068 0.96306 0.91454 0.95422 1.19570 0.92062 0.95766 0.97727 1.20315 0.92965 0.95926 1.02589 1.18821 0.83163 0.93702 1.03853 1.18549 0.91714 0.84728 1.04213 1.20166 0.90429 0.98171 1.04197 1.20359 0.86553 0.93816 1.02856 1.98407 1.09575 1.98393 1.94492 1.86296 1.30328 1.33476 1.71999 1.23628 0.82730 0.99160 0.99968 1.23612 0.96269 0.85814 0.99810 1.86321 1.16555 1.46982 1.72143 0.89031 0.89422 0.87248 0.92028 0.88403 0.95311 0.99394 0.92751 0.89780 0.93787 0.84105 0.84010 0.86144 0.90390 0.90561 0.86161 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 -3.03 13.78 29.02 0.40 -2.63 16 2 C -0.16 -2.73 7.43 -36.03 -0.27 -2.99 16 3 C 0.08 1.57 5.48 -4.98 -0.03 1.54 16 4 N -0.51 -10.09 4.57 -238.96 -1.09 -11.18 16 5 C 0.16 3.75 3.62 -4.97 -0.02 3.73 16 6 C -0.50 -13.88 9.02 -34.44 -0.31 -14.19 16 7 H 0.08 2.46 7.36 -52.49 -0.39 2.07 16 8 C 0.07 1.97 5.47 -17.82 -0.10 1.87 16 9 N -0.90 -27.38 13.96 55.43 0.77 -26.60 16 10 Si 0.87 21.29 27.47 -169.99 -4.67 16.62 16 11 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 12 H -0.29 -7.01 7.11 56.52 0.40 -6.61 16 13 H -0.27 -6.25 6.54 56.52 0.37 -5.88 16 14 C 0.09 1.44 4.29 -4.97 -0.02 1.42 16 15 C -0.05 -0.76 4.67 -104.59 -0.49 -1.25 16 16 C -0.10 -1.38 9.05 -39.43 -0.36 -1.74 16 17 C 0.05 0.66 6.49 -39.14 -0.25 0.41 16 18 C 0.05 0.71 6.49 -39.14 -0.25 0.46 16 19 C -0.11 -1.53 9.74 -39.39 -0.38 -1.91 16 20 C -0.01 -0.13 6.31 -39.52 -0.25 -0.37 16 21 Cl -0.04 -0.62 27.54 -51.86 -1.43 -2.05 16 22 O -0.31 -3.57 10.42 -32.85 -0.34 -3.91 16 23 C 0.02 0.16 7.26 37.41 0.27 0.43 16 24 C 0.02 0.16 7.26 37.41 0.27 0.43 16 25 O -0.31 -3.60 10.42 -32.91 -0.34 -3.94 16 26 H 0.09 1.23 7.37 -52.48 -0.39 0.84 16 27 H 0.09 1.13 8.06 -52.49 -0.42 0.70 16 28 H 0.11 2.02 6.80 -52.48 -0.36 1.66 16 29 H 0.06 1.07 6.68 -51.93 -0.35 0.73 16 30 H 0.10 2.09 6.78 -51.93 -0.35 1.73 16 31 H 0.03 0.69 6.92 -51.93 -0.36 0.33 16 32 H -0.01 -0.27 5.73 -51.93 -0.30 -0.56 16 33 H 0.26 7.52 8.31 -40.82 -0.34 7.18 16 34 H 0.08 1.43 7.23 -51.93 -0.38 1.06 16 35 H 0.04 0.71 6.56 -51.93 -0.34 0.37 16 36 H 0.14 1.86 6.97 -52.48 -0.37 1.49 16 37 H 0.14 1.75 8.06 -52.48 -0.42 1.33 16 38 H 0.12 0.52 8.14 -51.93 -0.42 0.09 16 39 H 0.08 0.59 8.14 -51.93 -0.42 0.16 16 40 H 0.08 0.53 8.14 -51.93 -0.42 0.11 16 41 H 0.12 0.53 8.14 -51.93 -0.42 0.11 16 LS Contribution 346.90 15.07 5.23 5.23 Total: -1.00 -31.12 346.90 -8.93 -40.05 By element: Atomic # 1 Polarization: 5.88 SS G_CDS: -5.27 Total: 0.60 kcal Atomic # 6 Polarization: -13.02 SS G_CDS: -1.79 Total: -14.81 kcal Atomic # 7 Polarization: -37.47 SS G_CDS: -0.32 Total: -37.79 kcal Atomic # 8 Polarization: -7.17 SS G_CDS: -0.69 Total: -7.85 kcal Atomic # 14 Polarization: 21.29 SS G_CDS: -4.67 Total: 16.62 kcal Atomic # 17 Polarization: -0.62 SS G_CDS: -1.43 Total: -2.05 kcal Total LS contribution 5.23 Total: 5.23 kcal Total: -31.12 -8.93 -40.05 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000292385257.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.757 kcal (2) G-P(sol) polarization free energy of solvation -31.116 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.358 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.930 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.046 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.288 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds