Wall clock time and date at job start Tue Mar 31 2020 14:15:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31000 * 1 3 3 C 1.50698 * 120.00062 * 2 1 4 4 N 1.46506 * 109.46918 * 126.22158 * 3 2 1 5 5 C 1.46501 * 119.99638 * 85.89406 * 4 3 2 6 6 C 1.50703 * 109.47202 * 92.70684 * 5 4 3 7 7 H 1.07999 * 119.99925 * 359.97438 * 6 5 4 8 8 C 1.37875 * 120.00110 * 180.02562 * 6 5 4 9 9 N 1.31516 * 119.99806 * 359.97438 * 8 6 5 10 10 Si 1.86794 * 120.00207 * 180.02562 * 8 6 5 11 11 H 1.48500 * 109.47171 * 59.99274 * 10 8 6 12 12 H 1.48506 * 109.47347 * 179.97438 * 10 8 6 13 13 H 1.48504 * 109.46978 * 299.99349 * 10 8 6 14 14 C 1.34767 * 120.00072 * 265.88694 * 4 3 2 15 15 O 1.21278 * 120.00377 * 356.21764 * 14 4 3 16 16 C 1.50704 * 120.00127 * 176.21322 * 14 4 3 17 17 H 1.09003 * 109.46610 * 327.31590 * 16 14 4 18 18 C 1.52997 * 109.47027 * 87.31331 * 16 14 4 19 19 O 1.42902 * 109.47339 * 185.45213 * 18 16 14 20 20 C 1.50696 * 109.47389 * 207.31775 * 16 14 4 21 21 C 1.38242 * 119.98405 * 299.72269 * 20 16 14 22 22 C 1.38218 * 120.01325 * 179.72375 * 21 20 16 23 23 C 1.38353 * 119.98217 * 0.55342 * 22 21 20 24 24 Cl 1.73609 * 120.01186 * 179.74395 * 23 22 21 25 25 C 1.38351 * 119.97772 * 359.72371 * 23 22 21 26 26 C 1.38211 * 119.98352 * 359.97438 * 25 23 22 27 27 H 1.08000 * 120.00056 * 185.08060 * 1 2 3 28 28 H 1.08001 * 119.99891 * 5.07642 * 1 2 3 29 29 H 1.07999 * 119.99612 * 179.97438 * 2 1 3 30 30 H 1.09004 * 109.47113 * 6.22450 * 3 2 1 31 31 H 1.08998 * 109.46973 * 246.22246 * 3 2 1 32 32 H 1.08999 * 109.46875 * 212.70387 * 5 4 3 33 33 H 1.09003 * 109.47206 * 332.70453 * 5 4 3 34 34 H 0.96998 * 120.00136 * 180.02562 * 9 8 6 35 35 H 1.09003 * 109.47317 * 305.45160 * 18 16 14 36 36 H 1.08998 * 109.47116 * 65.45176 * 18 16 14 37 37 H 0.96694 * 114.00289 * 179.97438 * 19 18 16 38 38 H 1.07997 * 119.99661 * 0.02562 * 21 20 16 39 39 H 1.07997 * 120.00907 * 180.26856 * 22 21 20 40 40 H 1.07995 * 120.00838 * 179.97438 * 25 23 22 41 41 H 1.07998 * 119.99257 * 180.02562 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0635 1.3051 0.0000 4 7 3.0145 1.3198 1.1143 5 6 4.3468 0.7336 0.9480 6 6 5.3156 1.8031 0.5137 7 1 4.9731 2.8179 0.3749 8 6 6.6390 1.4859 0.2924 9 7 7.0559 0.2500 0.4609 10 14 7.8400 2.8117 -0.2453 11 1 7.8943 3.8783 0.7864 12 1 9.1904 2.2174 -0.4140 13 1 7.3900 3.3934 -1.5355 14 6 2.6638 1.8728 2.2923 15 8 1.5873 2.4189 2.4092 16 6 3.6093 1.8125 3.4642 17 1 4.1836 0.8870 3.4204 18 6 4.5632 3.0075 3.4120 19 8 5.5394 2.8836 4.4482 20 6 2.8214 1.8544 4.7481 21 6 2.0168 2.9427 5.0297 22 6 1.2894 2.9791 6.2044 23 6 1.3756 1.9314 7.1038 24 17 0.4674 1.9794 8.5826 25 6 2.1854 0.8451 6.8241 26 6 2.9074 0.8070 5.6462 27 1 -0.5400 -0.9316 0.0828 28 1 -0.5400 0.9317 -0.0828 29 1 1.8499 -0.9353 0.0004 30 1 1.3604 2.1306 0.1114 31 1 2.6040 1.4125 -0.9404 32 1 4.6770 0.3074 1.8953 33 1 4.3071 -0.0499 0.1912 34 1 7.9870 0.0269 0.3056 35 1 5.0626 3.0317 2.4434 36 1 3.9988 3.9293 3.5529 37 1 6.1791 3.6082 4.4747 38 1 1.9527 3.7623 4.3294 39 1 0.6575 3.8274 6.4223 40 1 2.2534 0.0271 7.5260 41 1 3.5393 -0.0411 5.4275 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000359392580.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:15:54 Heat of formation + Delta-G solvation = -47.939590 kcal Electronic energy + Delta-G solvation = -25443.160979 eV Core-core repulsion = 21735.437887 eV Total energy + Delta-G solvation = -3707.723091 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 323.108 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -40.09721 -38.60337 -36.62084 -36.12055 -35.53784 -33.69417 -32.54121 -32.11773 -30.86658 -28.54613 -27.50370 -25.74927 -23.51321 -23.13280 -22.57316 -21.30689 -19.55189 -18.46357 -17.25261 -16.86866 -16.61868 -16.36525 -15.57757 -15.25119 -15.02203 -14.59742 -14.38214 -14.30601 -13.95750 -13.46536 -13.36306 -13.17286 -12.85857 -12.62817 -12.45158 -12.34384 -11.84366 -11.58482 -11.43860 -11.33202 -11.15809 -11.08544 -10.89213 -10.75787 -10.71878 -10.54643 -10.20219 -9.88492 -9.43698 -9.35146 -9.03158 -8.76481 -8.63517 -8.33358 -7.87075 -6.28695 -4.36149 1.33522 1.53316 2.21969 2.49289 3.14516 3.16091 3.22558 3.24843 3.71947 4.00427 4.22421 4.75029 4.92396 5.01319 5.04929 5.06643 5.28337 5.40402 5.48946 5.55340 5.57446 5.62661 5.74386 5.86407 5.96568 6.08432 6.10780 6.20686 6.27238 6.33530 6.40225 6.52290 6.60314 6.84222 6.87544 6.99756 7.05061 7.10349 7.39432 7.64274 7.93035 8.03805 8.17814 8.65341 8.85264 9.30460 10.77963 Molecular weight = 323.11amu Principal moments of inertia in cm(-1) A = 0.012689 B = 0.004182 C = 0.003430 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2206.184935 B = 6693.666026 C = 8162.142553 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 C -0.159 4.159 3 C 0.142 3.858 4 N -0.588 5.588 5 C 0.233 3.767 6 C -0.542 4.542 7 H 0.062 0.938 8 C 0.070 3.930 9 N -0.884 5.884 10 Si 0.895 3.105 11 H -0.275 1.275 12 H -0.285 1.285 13 H -0.276 1.276 14 C 0.528 3.472 15 O -0.561 6.561 16 C -0.064 4.064 17 H 0.114 0.886 18 C 0.083 3.917 19 O -0.567 6.567 20 C -0.047 4.047 21 C -0.069 4.069 22 C -0.117 4.117 23 C -0.039 4.039 24 Cl -0.087 7.087 25 C -0.117 4.117 26 C -0.095 4.095 27 H 0.093 0.907 28 H 0.095 0.905 29 H 0.108 0.892 30 H 0.080 0.920 31 H 0.085 0.915 32 H 0.040 0.960 33 H 0.038 0.962 34 H 0.267 0.733 35 H 0.095 0.905 36 H 0.038 0.962 37 H 0.376 0.624 38 H 0.133 0.867 39 H 0.128 0.872 40 H 0.129 0.871 41 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.459 2.221 7.386 10.729 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.227 4.227 2 C -0.179 4.179 3 C 0.019 3.981 4 N -0.317 5.317 5 C 0.114 3.886 6 C -0.580 4.580 7 H 0.080 0.920 8 C -0.134 4.134 9 N -0.521 5.521 10 Si 0.722 3.278 11 H -0.200 1.200 12 H -0.210 1.210 13 H -0.201 1.201 14 C 0.315 3.685 15 O -0.442 6.442 16 C -0.085 4.085 17 H 0.132 0.868 18 C 0.005 3.995 19 O -0.372 6.372 20 C -0.048 4.048 21 C -0.088 4.088 22 C -0.136 4.136 23 C -0.065 4.065 24 Cl -0.058 7.058 25 C -0.136 4.136 26 C -0.113 4.113 27 H 0.111 0.889 28 H 0.113 0.887 29 H 0.126 0.874 30 H 0.099 0.901 31 H 0.103 0.897 32 H 0.058 0.942 33 H 0.056 0.944 34 H 0.077 0.923 35 H 0.113 0.887 36 H 0.056 0.944 37 H 0.222 0.778 38 H 0.151 0.849 39 H 0.146 0.854 40 H 0.147 0.853 41 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -8.240 1.817 7.656 11.393 hybrid contribution 1.086 0.952 -0.396 1.498 sum -7.154 2.770 7.260 10.562 Atomic orbital electron populations 1.23738 0.95850 1.01464 1.01611 1.23403 0.96112 0.99438 0.98915 1.20400 0.92104 0.94986 0.90611 1.48176 1.16206 1.56983 1.10363 1.19539 0.76398 0.94275 0.98400 1.21357 0.93405 0.95500 1.47783 0.91988 1.24918 0.98152 0.95548 0.94819 1.69895 1.16961 1.17730 1.47562 0.86609 0.80134 0.81670 0.79373 1.20045 1.21050 1.20109 1.19941 0.86601 0.78195 0.83748 1.90600 1.24406 1.45469 1.83686 1.20183 0.95076 1.02931 0.90308 0.86830 1.22265 0.89712 0.94269 0.93260 1.86410 1.44753 1.51168 1.54891 1.19585 0.96145 0.94138 0.94900 1.21003 0.94313 0.98417 0.95038 1.20964 1.00838 0.97952 0.93857 1.20855 0.98800 0.97722 0.89159 1.98338 1.73955 1.98552 1.34961 1.20899 0.97221 0.97454 0.97982 1.21012 0.98651 0.98541 0.93117 0.88913 0.88698 0.87428 0.90121 0.89663 0.94179 0.94356 0.92284 0.88735 0.94426 0.77780 0.84878 0.85420 0.85316 0.85153 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.19 -2.66 14.31 29.01 0.42 -2.25 16 2 C -0.16 -2.53 9.85 -36.03 -0.35 -2.88 16 3 C 0.14 2.49 5.90 -5.19 -0.03 2.46 16 4 N -0.59 -11.61 2.44 -176.43 -0.43 -12.04 16 5 C 0.23 5.15 5.00 -5.19 -0.03 5.12 16 6 C -0.54 -12.87 7.11 -34.44 -0.24 -13.12 16 7 H 0.06 1.48 7.44 -52.49 -0.39 1.09 16 8 C 0.07 1.72 5.46 -17.82 -0.10 1.63 16 9 N -0.88 -23.05 13.29 55.43 0.74 -22.32 16 10 Si 0.89 19.25 29.54 -169.99 -5.02 14.23 16 11 H -0.28 -5.77 7.11 56.52 0.40 -5.37 16 12 H -0.29 -6.18 7.11 56.52 0.40 -5.78 16 13 H -0.28 -5.94 7.11 56.52 0.40 -5.54 16 14 C 0.53 10.41 6.73 -10.99 -0.07 10.34 16 15 O -0.56 -11.75 14.08 5.56 0.08 -11.67 16 16 C -0.06 -1.17 1.93 -92.92 -0.18 -1.35 16 17 H 0.11 2.19 5.80 -51.93 -0.30 1.89 16 18 C 0.08 1.46 6.29 37.16 0.23 1.69 16 19 O -0.57 -9.51 13.42 -35.23 -0.47 -9.98 16 20 C -0.05 -0.80 4.44 -104.62 -0.46 -1.26 16 21 C -0.07 -1.12 7.85 -39.59 -0.31 -1.43 16 22 C -0.12 -1.70 9.83 -39.55 -0.39 -2.09 16 23 C -0.04 -0.55 6.32 -39.50 -0.25 -0.80 16 24 Cl -0.09 -1.08 28.96 -51.86 -1.50 -2.58 16 25 C -0.12 -1.63 9.83 -39.55 -0.39 -2.02 16 26 C -0.09 -1.46 9.67 -39.59 -0.38 -1.84 16 27 H 0.09 1.14 8.06 -52.49 -0.42 0.72 16 28 H 0.09 1.30 7.86 -52.49 -0.41 0.89 16 29 H 0.11 1.69 8.06 -52.49 -0.42 1.27 16 30 H 0.08 1.42 6.93 -51.93 -0.36 1.06 16 31 H 0.09 1.47 8.10 -51.93 -0.42 1.05 16 32 H 0.04 0.93 5.88 -51.93 -0.31 0.62 16 33 H 0.04 0.89 8.05 -51.93 -0.42 0.47 16 34 H 0.27 6.70 8.31 -40.82 -0.34 6.37 16 35 H 0.09 1.87 5.17 -51.93 -0.27 1.60 16 36 H 0.04 0.62 7.20 -51.93 -0.37 0.24 16 37 H 0.38 4.67 9.12 45.56 0.42 5.09 16 38 H 0.13 2.17 6.81 -52.49 -0.36 1.81 16 39 H 0.13 1.58 8.06 -52.49 -0.42 1.16 16 40 H 0.13 1.51 8.06 -52.49 -0.42 1.09 16 41 H 0.13 1.84 7.94 -52.49 -0.42 1.42 16 LS Contribution 360.40 15.07 5.43 5.43 Total: -1.00 -27.41 360.40 -8.16 -35.57 By element: Atomic # 1 Polarization: 15.59 SS G_CDS: -4.44 Total: 11.15 kcal Atomic # 6 Polarization: -5.25 SS G_CDS: -2.54 Total: -7.80 kcal Atomic # 7 Polarization: -34.66 SS G_CDS: 0.31 Total: -34.36 kcal Atomic # 8 Polarization: -21.26 SS G_CDS: -0.39 Total: -21.65 kcal Atomic # 14 Polarization: 19.25 SS G_CDS: -5.02 Total: 14.23 kcal Atomic # 17 Polarization: -1.08 SS G_CDS: -1.50 Total: -2.58 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -27.41 -8.16 -35.57 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000359392580.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.366 kcal (2) G-P(sol) polarization free energy of solvation -27.414 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.780 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.160 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.574 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.940 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds