Wall clock time and date at job start Tue Mar 31 2020 14:15:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31012 * 1 3 3 C 1.50698 * 119.99924 * 2 1 4 4 N 1.46497 * 109.46982 * 125.94720 * 3 2 1 5 5 C 1.46495 * 120.00505 * 265.15424 * 4 3 2 6 6 C 1.50697 * 109.47121 * 275.84268 * 5 4 3 7 7 H 1.08003 * 120.00297 * 359.97438 * 6 5 4 8 8 C 1.37882 * 120.00193 * 179.97438 * 6 5 4 9 9 N 1.31514 * 119.99791 * 359.97438 * 8 6 5 10 10 Si 1.86796 * 120.00093 * 179.97438 * 8 6 5 11 11 H 1.48498 * 109.47141 * 90.00292 * 10 8 6 12 12 H 1.48507 * 109.46963 * 209.99954 * 10 8 6 13 13 H 1.48493 * 109.47429 * 330.00247 * 10 8 6 14 14 C 1.34776 * 119.99680 * 85.15681 * 4 3 2 15 15 O 1.21283 * 120.00265 * 5.19030 * 14 4 3 16 16 C 1.50705 * 120.00178 * 185.18944 * 14 4 3 17 17 H 1.08998 * 109.46636 * 45.22670 * 16 14 4 18 18 O 1.42901 * 109.47008 * 165.22204 * 16 14 4 19 19 C 1.53001 * 109.47059 * 285.22465 * 16 14 4 20 20 C 1.50701 * 109.46709 * 173.86485 * 19 16 14 21 21 C 1.38239 * 120.00688 * 265.01951 * 20 19 16 22 22 C 1.38218 * 120.01205 * 180.02562 * 21 20 19 23 23 C 1.38269 * 120.02305 * 359.70031 * 22 21 20 24 24 C 1.38188 * 120.01576 * 0.55554 * 23 22 21 25 25 C 1.38325 * 120.00285 * 85.00628 * 20 19 16 26 26 Cl 1.73594 * 120.01654 * 359.97438 * 25 20 19 27 27 H 1.07999 * 119.99721 * 180.02562 * 1 2 3 28 28 H 1.07997 * 119.99795 * 359.97438 * 1 2 3 29 29 H 1.07997 * 119.99795 * 180.02562 * 2 1 3 30 30 H 1.09001 * 109.46908 * 5.94872 * 3 2 1 31 31 H 1.09001 * 109.47027 * 245.95277 * 3 2 1 32 32 H 1.09001 * 109.46536 * 35.83921 * 5 4 3 33 33 H 1.09000 * 109.47216 * 155.84012 * 5 4 3 34 34 H 0.96997 * 120.00253 * 179.97438 * 9 8 6 35 35 H 0.96699 * 113.99722 * 60.00450 * 18 16 14 36 36 H 1.09002 * 109.47070 * 53.86830 * 19 16 14 37 37 H 1.08997 * 109.47180 * 293.87029 * 19 16 14 38 38 H 1.08000 * 119.99369 * 359.97438 * 21 20 19 39 39 H 1.07997 * 119.98695 * 179.97438 * 22 21 20 40 40 H 1.08005 * 119.98930 * 180.29648 * 23 22 21 41 41 H 1.08001 * 120.00690 * 179.74590 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3101 0.0000 0.0000 3 6 2.0636 1.3051 0.0000 4 7 3.0099 1.3226 1.1182 5 6 2.6293 1.9410 2.3905 6 6 2.8781 3.4256 2.3217 7 1 3.2800 3.8647 1.4205 8 6 2.5926 4.2237 3.4093 9 7 2.1027 3.6892 4.5065 10 14 2.9018 6.0639 3.3242 11 1 1.6848 6.7474 2.8172 12 1 3.2274 6.5743 4.6803 13 1 4.0387 6.3331 2.4078 14 6 4.2309 0.7697 0.9763 15 8 4.5813 0.3422 -0.1032 16 6 5.1608 0.6828 2.1590 17 1 4.6093 0.3269 3.0293 18 8 6.2231 -0.2263 1.8639 19 6 5.7413 2.0673 2.4542 20 6 6.5508 2.0121 3.7242 21 6 5.9708 2.3613 4.9294 22 6 6.7132 2.3113 6.0942 23 6 8.0346 1.9061 6.0554 24 6 8.6171 1.5618 4.8505 25 6 7.8743 1.6118 3.6840 26 17 8.6030 1.1722 2.1710 27 1 -0.5399 -0.9353 0.0004 28 1 -0.5400 0.9353 0.0004 29 1 1.8501 -0.9353 -0.0004 30 1 1.3600 2.1308 0.1065 31 1 2.6079 1.4104 -0.9385 32 1 1.5717 1.7582 2.5811 33 1 3.2235 1.5099 3.1962 34 1 1.9022 4.2505 5.2717 35 1 6.7573 0.0282 1.0991 36 1 4.9289 2.7843 2.5720 37 1 6.3818 2.3763 1.6281 38 1 4.9375 2.6741 4.9608 39 1 6.2598 2.5846 7.0355 40 1 8.6129 1.8626 6.9666 41 1 9.6504 1.2492 4.8198 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000359420895.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:15:49 Heat of formation + Delta-G solvation = -50.266044 kcal Electronic energy + Delta-G solvation = -25854.099827 eV Core-core repulsion = 22146.275853 eV Total energy + Delta-G solvation = -3707.823974 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 323.108 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -39.85406 -38.88363 -36.40207 -36.12745 -35.36688 -33.68755 -32.50825 -32.17375 -30.43244 -28.76376 -27.56984 -25.88044 -23.75004 -22.91642 -22.37719 -20.91407 -19.86472 -18.81098 -17.09891 -16.80961 -16.50113 -16.17044 -15.47997 -15.29027 -15.01111 -14.60122 -14.52597 -14.44789 -13.75574 -13.54314 -13.12567 -12.88498 -12.67266 -12.64877 -12.29350 -11.91787 -11.60902 -11.56920 -11.31442 -11.28094 -11.25759 -11.06759 -10.94333 -10.85134 -10.72363 -10.45279 -10.29340 -10.08492 -9.85680 -9.21688 -8.90051 -8.69947 -8.55854 -8.27745 -7.86004 -6.33767 -4.41346 1.42361 1.53565 2.41940 2.52805 3.13304 3.19294 3.22124 3.27638 3.85912 3.95488 4.21323 4.78088 4.93952 5.03659 5.07037 5.17425 5.29696 5.38947 5.51282 5.53837 5.58200 5.59739 5.72067 5.91514 5.95943 6.14685 6.17733 6.30103 6.31167 6.45029 6.60427 6.67613 6.70340 6.89702 6.90803 6.98052 7.07409 7.13534 7.41672 7.60945 7.88315 7.95518 8.21694 8.62957 8.85548 9.25613 10.71389 Molecular weight = 323.11amu Principal moments of inertia in cm(-1) A = 0.009837 B = 0.006110 C = 0.004283 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2845.796321 B = 4581.912318 C = 6535.266941 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.193 4.193 2 C -0.156 4.156 3 C 0.143 3.857 4 N -0.587 5.587 5 C 0.232 3.768 6 C -0.541 4.541 7 H 0.064 0.936 8 C 0.072 3.928 9 N -0.882 5.882 10 Si 0.889 3.111 11 H -0.278 1.278 12 H -0.283 1.283 13 H -0.271 1.271 14 C 0.489 3.511 15 O -0.567 6.567 16 C 0.107 3.893 17 H 0.121 0.879 18 O -0.542 6.542 19 C -0.137 4.137 20 C -0.055 4.055 21 C -0.094 4.094 22 C -0.118 4.118 23 C -0.120 4.120 24 C -0.120 4.120 25 C -0.022 4.022 26 Cl -0.074 7.074 27 H 0.093 0.907 28 H 0.098 0.902 29 H 0.103 0.897 30 H 0.086 0.914 31 H 0.078 0.922 32 H 0.037 0.963 33 H 0.042 0.958 34 H 0.267 0.733 35 H 0.373 0.627 36 H 0.144 0.856 37 H 0.074 0.926 38 H 0.149 0.851 39 H 0.125 0.875 40 H 0.124 0.876 41 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.474 -2.907 1.154 7.190 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C -0.175 4.175 3 C 0.020 3.980 4 N -0.318 5.318 5 C 0.113 3.887 6 C -0.579 4.579 7 H 0.083 0.917 8 C -0.133 4.133 9 N -0.519 5.519 10 Si 0.716 3.284 11 H -0.204 1.204 12 H -0.208 1.208 13 H -0.195 1.195 14 C 0.277 3.723 15 O -0.448 6.448 16 C 0.045 3.955 17 H 0.138 0.862 18 O -0.348 6.348 19 C -0.174 4.174 20 C -0.056 4.056 21 C -0.112 4.112 22 C -0.136 4.136 23 C -0.138 4.138 24 C -0.139 4.139 25 C -0.049 4.049 26 Cl -0.045 7.045 27 H 0.111 0.889 28 H 0.116 0.884 29 H 0.121 0.879 30 H 0.105 0.895 31 H 0.097 0.903 32 H 0.055 0.945 33 H 0.060 0.940 34 H 0.077 0.923 35 H 0.223 0.777 36 H 0.161 0.839 37 H 0.093 0.907 38 H 0.167 0.833 39 H 0.143 0.857 40 H 0.142 0.858 41 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 6.422 -3.422 1.180 7.372 hybrid contribution 0.267 1.313 -0.413 1.402 sum 6.689 -2.109 0.768 7.055 Atomic orbital electron populations 1.23767 0.95740 1.01557 1.01966 1.23394 0.96087 0.99352 0.98642 1.20415 0.91923 0.94822 0.90817 1.48248 1.12797 1.55225 1.15550 1.19569 0.97355 0.92721 0.79098 1.21436 1.44212 0.92042 1.00238 0.91744 1.24906 0.94459 0.98754 0.95149 1.69918 1.42341 1.36050 1.03626 0.86622 0.78984 0.85057 0.77762 1.20425 1.20841 1.19546 1.21392 0.83010 0.77528 0.90405 1.90598 1.76033 1.50218 1.27935 1.21716 0.87627 0.90385 0.95753 0.86195 1.86571 1.44368 1.51029 1.52797 1.21778 1.02266 0.98990 0.94376 1.19685 0.91898 0.97748 0.96229 1.21446 1.01418 0.97468 0.90851 1.21252 0.94185 0.99506 0.98659 1.21017 0.95488 1.00266 0.97019 1.20913 0.99886 1.01893 0.91177 1.20799 0.93735 1.03432 0.86889 1.98313 1.82421 1.91382 1.32356 0.88904 0.88420 0.87853 0.89526 0.90340 0.94467 0.94049 0.92276 0.77701 0.83887 0.90700 0.83347 0.85688 0.85776 0.85609 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.19 -2.74 14.32 29.01 0.42 -2.32 16 2 C -0.16 -2.56 9.81 -36.03 -0.35 -2.91 16 3 C 0.14 2.60 5.86 -5.20 -0.03 2.57 16 4 N -0.59 -11.80 2.45 -176.44 -0.43 -12.23 16 5 C 0.23 5.04 4.65 -5.20 -0.02 5.01 16 6 C -0.54 -12.54 6.84 -34.44 -0.24 -12.77 16 7 H 0.06 1.54 7.81 -52.48 -0.41 1.13 16 8 C 0.07 1.70 5.46 -17.82 -0.10 1.60 16 9 N -0.88 -21.61 13.29 55.43 0.74 -20.88 16 10 Si 0.89 18.98 29.54 -169.99 -5.02 13.96 16 11 H -0.28 -6.02 7.11 56.52 0.40 -5.62 16 12 H -0.28 -6.03 7.11 56.52 0.40 -5.63 16 13 H -0.27 -5.82 7.11 56.52 0.40 -5.42 16 14 C 0.49 10.03 6.95 -10.98 -0.08 9.95 16 15 O -0.57 -12.69 15.94 -13.91 -0.22 -12.91 16 16 C 0.11 2.01 2.52 -27.88 -0.07 1.94 16 17 H 0.12 2.28 6.81 -51.93 -0.35 1.92 16 18 O -0.54 -9.98 11.20 -54.70 -0.61 -10.59 16 19 C -0.14 -2.49 4.41 -27.88 -0.12 -2.62 16 20 C -0.05 -0.93 5.04 -104.59 -0.53 -1.46 16 21 C -0.09 -1.56 9.68 -39.59 -0.38 -1.94 16 22 C -0.12 -1.66 10.05 -39.58 -0.40 -2.06 16 23 C -0.12 -1.52 10.05 -39.59 -0.40 -1.92 16 24 C -0.12 -1.63 9.83 -39.55 -0.39 -2.01 16 25 C -0.02 -0.34 6.08 -39.50 -0.24 -0.58 16 26 Cl -0.07 -1.08 24.31 -51.86 -1.26 -2.34 16 27 H 0.09 1.15 8.06 -52.49 -0.42 0.73 16 28 H 0.10 1.33 7.84 -52.49 -0.41 0.91 16 29 H 0.10 1.76 8.06 -52.49 -0.42 1.34 16 30 H 0.09 1.53 7.69 -51.93 -0.40 1.14 16 31 H 0.08 1.44 7.50 -51.93 -0.39 1.05 16 32 H 0.04 0.87 8.11 -51.93 -0.42 0.45 16 33 H 0.04 0.91 5.61 -51.93 -0.29 0.62 16 34 H 0.27 6.32 8.31 -40.82 -0.34 5.98 16 35 H 0.37 6.52 7.02 45.56 0.32 6.84 16 36 H 0.14 2.90 4.25 -51.93 -0.22 2.68 16 37 H 0.07 1.34 7.13 -51.93 -0.37 0.97 16 38 H 0.15 2.73 8.06 -52.49 -0.42 2.31 16 39 H 0.13 1.51 8.06 -52.49 -0.42 1.08 16 40 H 0.12 1.21 8.06 -52.48 -0.42 0.78 16 41 H 0.13 1.43 8.06 -52.49 -0.42 1.00 16 LS Contribution 356.02 15.07 5.37 5.37 Total: -1.00 -25.88 356.02 -9.00 -34.87 By element: Atomic # 1 Polarization: 18.89 SS G_CDS: -4.62 Total: 14.27 kcal Atomic # 6 Polarization: -6.59 SS G_CDS: -2.93 Total: -9.52 kcal Atomic # 7 Polarization: -33.41 SS G_CDS: 0.30 Total: -33.11 kcal Atomic # 8 Polarization: -22.66 SS G_CDS: -0.83 Total: -23.50 kcal Atomic # 14 Polarization: 18.98 SS G_CDS: -5.02 Total: 13.96 kcal Atomic # 17 Polarization: -1.08 SS G_CDS: -1.26 Total: -2.34 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -25.88 -9.00 -34.87 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000359420895.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.392 kcal (2) G-P(sol) polarization free energy of solvation -25.877 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.270 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.996 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.874 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.266 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds