Wall clock time and date at job start Tue Mar 31 2020 14:07:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.30995 * 1 3 3 C 1.50700 * 120.00207 * 2 1 4 4 H 1.09000 * 110.67558 * 357.03735 * 3 2 1 5 5 O 1.44378 * 110.61667 * 234.06741 * 3 2 1 6 6 C 1.43747 * 106.97125 * 201.43875 * 5 3 2 7 7 C 1.54100 * 107.29659 * 26.51789 * 6 5 3 8 8 C 1.54813 * 104.18532 * 357.96589 * 7 6 5 9 9 H 1.09002 * 110.90394 * 97.32129 * 8 7 6 10 10 N 1.46898 * 110.90878 * 220.88666 * 8 7 6 11 11 C 1.46904 * 110.99885 * 270.67337 * 10 8 7 12 12 C 1.50702 * 109.46825 * 180.02562 * 11 10 8 13 13 C 1.38114 * 120.02778 * 259.72223 * 12 11 10 14 14 C 1.38384 * 120.05860 * 179.79345 * 13 12 11 15 15 Cl 1.73600 * 119.94961 * 180.25429 * 14 13 12 16 16 C 1.38436 * 120.10842 * 0.46349 * 14 13 12 17 17 C 1.38068 * 120.05683 * 359.78891 * 16 14 13 18 18 C 1.38848 * 120.03102 * 80.00172 * 12 11 10 19 19 O 1.35769 * 120.05680 * 359.95479 * 18 12 11 20 20 C 1.34818 * 117.00428 * 174.42262 * 19 18 12 21 21 H 1.08007 * 120.00208 * 5.06365 * 20 19 18 22 22 C 1.38644 * 120.00525 * 185.06055 * 20 19 18 23 23 N 1.31564 * 119.99418 * 0.02562 * 22 20 19 24 24 Si 1.86797 * 120.00614 * 179.97438 * 22 20 19 25 25 H 1.48506 * 109.46764 * 60.00283 * 24 22 20 26 26 H 1.48500 * 109.47220 * 180.02562 * 24 22 20 27 27 H 1.48501 * 109.47027 * 300.00573 * 24 22 20 28 28 H 1.08009 * 120.00501 * 179.97438 * 1 2 3 29 29 H 1.08005 * 119.99996 * 0.02562 * 1 2 3 30 30 H 1.08004 * 119.99486 * 179.97438 * 2 1 3 31 31 H 1.09000 * 109.87856 * 267.09135 * 6 5 3 32 32 H 1.08997 * 109.87664 * 145.94256 * 6 5 3 33 33 H 1.08996 * 110.48749 * 239.29528 * 7 6 5 34 34 H 1.08992 * 110.60150 * 116.69810 * 7 6 5 35 35 H 1.00904 * 110.99952 * 146.72138 * 10 8 7 36 36 H 1.08994 * 109.47112 * 299.99599 * 11 10 8 37 37 H 1.09001 * 109.46876 * 60.00208 * 11 10 8 38 38 H 1.08009 * 119.97219 * 0.02562 * 13 12 11 39 39 H 1.08001 * 119.96962 * 179.77023 * 16 14 13 40 40 H 1.08001 * 120.02505 * 179.97438 * 17 16 14 41 41 H 0.97006 * 120.00085 * 180.02562 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0635 1.3051 0.0000 4 1 1.3740 2.1476 -0.0527 5 8 3.0044 1.3488 -1.0942 6 6 4.0002 2.3276 -0.7524 7 6 4.0582 2.4044 0.7856 8 6 2.9645 1.4150 1.2564 9 1 3.3982 0.4477 1.5099 10 7 2.2146 1.9647 2.3937 11 6 2.8484 1.6000 3.6678 12 6 2.0526 2.1798 4.8087 13 6 2.4760 3.3396 5.4276 14 6 1.7434 3.8749 6.4725 15 17 2.2746 5.3364 7.2441 16 6 0.5899 3.2443 6.9065 17 6 0.1652 2.0818 6.2945 18 6 0.8962 1.5452 5.2424 19 8 0.4805 0.4024 4.6388 20 6 -0.5826 -0.2247 5.1814 21 1 -1.1131 0.2275 6.0064 22 6 -0.9949 -1.4499 4.6803 23 7 -0.3484 -2.0009 3.6757 24 14 -2.4674 -2.3190 5.4325 25 1 -3.6695 -1.4565 5.3050 26 1 -2.7007 -3.6022 4.7224 27 1 -2.2022 -2.5895 6.8684 28 1 -0.5401 -0.9353 -0.0004 29 1 -0.5400 0.9354 -0.0004 30 1 1.8499 -0.9354 0.0004 31 1 3.7214 3.2985 -1.1618 32 1 4.9701 2.0222 -1.1450 33 1 3.8307 3.4146 1.1259 34 1 5.0372 2.0919 1.1486 35 1 1.2513 1.6654 2.3703 36 1 2.8785 0.5145 3.7610 37 1 3.8638 1.9954 3.6948 38 1 3.3776 3.8314 5.0933 39 1 0.0218 3.6620 7.7246 40 1 -0.7346 1.5901 6.6338 41 1 -0.6370 -2.8580 3.3248 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000831678620.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:07:19 Heat of formation + Delta-G solvation = -34.295725 kcal Electronic energy + Delta-G solvation = -25154.626840 eV Core-core repulsion = 21447.495391 eV Total energy + Delta-G solvation = -3707.131449 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 323.108 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -39.66747 -39.23871 -36.87994 -35.81030 -35.08624 -33.51061 -32.43503 -31.60235 -29.83918 -28.82182 -27.39019 -25.54202 -24.34987 -22.69294 -21.81058 -20.81390 -20.41028 -19.72055 -18.16921 -17.07981 -16.47091 -15.94803 -15.73166 -15.19802 -15.10257 -14.58881 -14.47950 -13.95786 -13.88385 -13.63967 -13.38983 -13.10737 -13.00359 -12.80793 -12.40098 -12.08610 -11.92052 -11.76439 -11.70643 -11.29733 -11.18726 -11.07002 -10.89530 -10.68408 -10.61246 -10.55024 -10.42496 -10.36504 -9.62504 -9.50443 -9.07450 -8.93671 -8.39681 -8.03524 -7.30596 -6.60422 -4.18722 1.91622 2.03986 2.51920 2.79087 3.04407 3.05597 3.07944 3.83807 4.02693 4.27892 4.68815 4.80673 4.89627 4.93863 5.06304 5.11683 5.24016 5.36004 5.40231 5.50864 5.58360 5.65704 5.77072 5.81334 5.83073 5.95111 6.01922 6.08354 6.15565 6.24111 6.31252 6.39787 6.60925 6.81225 6.88630 6.92966 6.93144 7.06792 7.08953 7.18065 7.40540 7.50712 7.75191 7.84791 8.84817 9.48342 10.55396 Molecular weight = 323.11amu Principal moments of inertia in cm(-1) A = 0.007030 B = 0.006029 C = 0.003375 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3981.817326 B = 4643.008301 C = 8293.230892 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.158 4.158 3 C 0.108 3.892 4 H 0.079 0.921 5 O -0.373 6.373 6 C 0.049 3.951 7 C -0.148 4.148 8 C 0.064 3.936 9 H 0.062 0.938 10 N -0.670 5.670 11 C 0.121 3.879 12 C -0.149 4.149 13 C -0.045 4.045 14 C -0.125 4.125 15 Cl -0.107 7.107 16 C -0.060 4.060 17 C -0.224 4.224 18 C 0.160 3.840 19 O -0.165 6.165 20 C -0.395 4.395 21 H 0.092 0.908 22 C 0.046 3.954 23 N -0.852 5.852 24 Si 0.938 3.062 25 H -0.269 1.269 26 H -0.278 1.278 27 H -0.270 1.270 28 H 0.104 0.896 29 H 0.095 0.905 30 H 0.112 0.888 31 H 0.056 0.944 32 H 0.079 0.921 33 H 0.087 0.913 34 H 0.071 0.929 35 H 0.355 0.645 36 H 0.047 0.953 37 H 0.068 0.932 38 H 0.122 0.878 39 H 0.117 0.883 40 H 0.135 0.865 41 H 0.271 0.729 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.699 6.566 -2.843 8.560 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.186 4.186 2 C -0.176 4.176 3 C 0.051 3.949 4 H 0.096 0.904 5 O -0.292 6.292 6 C -0.029 4.029 7 C -0.187 4.187 8 C -0.047 4.047 9 H 0.080 0.920 10 N -0.303 5.303 11 C -0.008 4.008 12 C -0.151 4.151 13 C -0.065 4.065 14 C -0.152 4.152 15 Cl -0.079 7.079 16 C -0.079 4.079 17 C -0.244 4.244 18 C 0.105 3.895 19 O -0.068 6.068 20 C -0.471 4.471 21 H 0.109 0.891 22 C -0.160 4.160 23 N -0.486 5.486 24 Si 0.762 3.238 25 H -0.194 1.194 26 H -0.202 1.202 27 H -0.195 1.195 28 H 0.122 0.878 29 H 0.113 0.887 30 H 0.130 0.870 31 H 0.075 0.925 32 H 0.097 0.903 33 H 0.105 0.895 34 H 0.090 0.910 35 H 0.175 0.825 36 H 0.065 0.935 37 H 0.086 0.914 38 H 0.140 0.860 39 H 0.135 0.865 40 H 0.153 0.847 41 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges 5.108 6.802 -3.377 9.152 hybrid contribution -0.980 -1.080 0.953 1.742 sum 4.128 5.722 -2.424 7.460 Atomic orbital electron populations 1.23808 0.95575 1.02128 0.97124 1.22532 0.95677 0.96921 1.02515 1.22269 0.91017 0.96319 0.85315 0.90361 1.88896 1.38550 1.60398 1.41353 1.23102 0.92414 0.92447 0.94897 1.22986 0.99174 1.01615 0.94908 1.22983 0.94059 0.96340 0.91305 0.91972 1.60695 1.06925 1.62059 1.00622 1.20517 0.95906 0.98124 0.86206 1.18691 0.96875 0.97957 1.01532 1.20378 0.98577 0.93845 0.93688 1.20295 1.00328 0.92502 1.02030 1.98279 1.90611 1.37513 1.81462 1.20640 0.94215 0.94483 0.98528 1.21083 1.03644 0.98680 1.00967 1.19237 0.91700 0.87829 0.90740 1.83944 1.44557 1.30309 1.47957 1.21266 1.05580 1.02519 1.17687 0.89086 1.25235 0.98948 0.95584 0.96215 1.70013 1.38660 1.17263 1.22621 0.85820 0.80128 0.78719 0.79084 1.19430 1.20243 1.19489 0.87780 0.88700 0.86995 0.92530 0.90254 0.89456 0.91019 0.82547 0.93533 0.91406 0.86016 0.86485 0.84704 0.91896 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.39 14.33 29.02 0.42 -1.98 16 2 C -0.16 -2.59 9.24 -36.02 -0.33 -2.93 16 3 C 0.11 1.68 3.11 -26.83 -0.08 1.59 16 4 H 0.08 1.21 7.86 -51.93 -0.41 0.80 16 5 O -0.37 -5.73 11.21 -35.23 -0.39 -6.12 16 6 C 0.05 0.59 7.70 37.73 0.29 0.88 16 7 C -0.15 -1.87 6.75 -25.20 -0.17 -2.04 16 8 C 0.06 0.98 2.85 -65.70 -0.19 0.80 16 9 H 0.06 1.03 7.78 -51.93 -0.40 0.63 16 10 N -0.67 -11.40 6.32 -105.87 -0.67 -12.07 16 11 C 0.12 2.14 5.36 -4.97 -0.03 2.11 16 12 C -0.15 -2.85 5.41 -104.44 -0.56 -3.41 16 13 C -0.05 -0.79 9.45 -39.57 -0.37 -1.16 16 14 C -0.12 -2.15 6.32 -39.45 -0.25 -2.40 16 15 Cl -0.11 -1.62 28.95 -51.86 -1.50 -3.12 16 16 C -0.06 -1.06 9.82 -39.57 -0.39 -1.44 16 17 C -0.22 -4.50 9.17 -39.40 -0.36 -4.86 16 18 C 0.16 3.48 6.62 -39.11 -0.26 3.23 16 19 O -0.17 -4.13 8.95 0.02 0.00 -4.13 16 20 C -0.39 -9.97 9.49 30.88 0.29 -9.68 16 21 H 0.09 2.15 5.20 -52.48 -0.27 1.88 16 22 C 0.05 1.15 5.49 -17.52 -0.10 1.05 16 23 N -0.85 -22.45 13.67 55.48 0.76 -21.69 16 24 Si 0.94 19.14 29.55 -169.99 -5.02 14.12 16 25 H -0.27 -5.37 7.11 56.52 0.40 -4.96 16 26 H -0.28 -5.59 7.11 56.52 0.40 -5.19 16 27 H -0.27 -5.41 7.11 56.52 0.40 -5.01 16 28 H 0.10 1.65 8.06 -52.48 -0.42 1.22 16 29 H 0.09 1.41 7.87 -52.48 -0.41 1.00 16 30 H 0.11 1.86 8.06 -52.48 -0.42 1.44 16 31 H 0.06 0.62 8.14 -51.93 -0.42 0.20 16 32 H 0.08 0.82 8.14 -51.93 -0.42 0.40 16 33 H 0.09 1.10 8.06 -51.93 -0.42 0.68 16 34 H 0.07 0.81 8.14 -51.93 -0.42 0.39 16 35 H 0.35 6.86 8.42 -39.29 -0.33 6.53 16 36 H 0.05 0.94 7.80 -51.93 -0.40 0.53 16 37 H 0.07 1.05 8.00 -51.93 -0.42 0.64 16 38 H 0.12 1.87 8.04 -52.48 -0.42 1.45 16 39 H 0.12 1.81 8.06 -52.49 -0.42 1.38 16 40 H 0.14 2.68 5.64 -52.49 -0.30 2.38 16 41 H 0.27 6.69 8.31 -40.82 -0.34 6.35 16 LS Contribution 362.64 15.07 5.46 5.46 Total: -1.00 -26.13 362.64 -8.92 -35.05 By element: Atomic # 1 Polarization: 18.19 SS G_CDS: -5.46 Total: 12.73 kcal Atomic # 6 Polarization: -18.14 SS G_CDS: -2.09 Total: -20.23 kcal Atomic # 7 Polarization: -33.85 SS G_CDS: 0.09 Total: -33.76 kcal Atomic # 8 Polarization: -9.86 SS G_CDS: -0.39 Total: -10.25 kcal Atomic # 14 Polarization: 19.14 SS G_CDS: -5.02 Total: 14.12 kcal Atomic # 17 Polarization: -1.62 SS G_CDS: -1.50 Total: -3.12 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -26.13 -8.92 -35.05 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000831678620.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.753 kcal (2) G-P(sol) polarization free energy of solvation -26.133 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.380 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.916 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.049 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.296 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds