Wall clock time and date at job start Tue Mar 31 2020 14:05:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42901 * 113.99835 * 2 1 4 4 C 1.52991 * 109.46970 * 180.02562 * 3 2 1 5 5 N 1.46496 * 109.47575 * 65.98447 * 4 3 2 6 6 C 1.36723 * 120.00195 * 266.70655 * 5 4 3 7 7 H 1.07998 * 119.99890 * 141.77319 * 6 5 4 8 8 C 1.39117 * 119.99677 * 321.76766 * 6 5 4 9 9 N 1.31327 * 119.99691 * 158.13459 * 8 6 5 10 10 Si 1.86798 * 120.00220 * 338.13320 * 8 6 5 11 11 H 1.48503 * 109.46944 * 95.36158 * 10 8 6 12 12 H 1.48506 * 109.46885 * 215.35957 * 10 8 6 13 13 H 1.48491 * 109.47203 * 335.35985 * 10 8 6 14 14 C 1.34778 * 120.00016 * 86.70571 * 5 4 3 15 15 O 1.21764 * 119.99756 * 359.97438 * 14 5 4 16 16 C 1.46187 * 120.00460 * 180.02562 * 14 5 4 17 17 C 1.35020 * 120.00339 * 180.02562 * 16 14 5 18 18 C 1.50696 * 119.99811 * 179.97438 * 17 16 14 19 19 C 1.47080 * 119.99858 * 359.97438 * 17 16 14 20 20 C 1.39913 * 120.17899 * 105.00097 * 19 17 16 21 21 C 1.37830 * 119.83487 * 179.72497 * 20 19 17 22 22 C 1.38462 * 120.21070 * 0.28092 * 21 20 19 23 23 C 1.38339 * 120.37141 * 359.97438 * 22 21 20 24 24 C 1.38054 * 120.16038 * 359.95546 * 23 22 21 25 25 Cl 1.73599 * 120.10762 * 179.97438 * 24 23 22 26 26 H 1.09008 * 109.47095 * 60.00464 * 1 2 3 27 27 H 1.08998 * 109.47211 * 180.02562 * 1 2 3 28 28 H 1.08996 * 109.47482 * 300.00407 * 1 2 3 29 29 H 1.08995 * 109.47611 * 59.99475 * 3 2 1 30 30 H 1.09004 * 109.46445 * 299.99305 * 3 2 1 31 31 H 1.09008 * 109.47308 * 305.98291 * 4 3 2 32 32 H 1.09000 * 109.47422 * 185.99050 * 4 3 2 33 33 H 0.97000 * 120.00329 * 180.02562 * 9 8 6 34 34 H 1.08004 * 119.99221 * 359.97438 * 16 14 5 35 35 H 1.08995 * 109.47785 * 269.99823 * 18 17 16 36 36 H 1.09005 * 109.47510 * 30.00247 * 18 17 16 37 37 H 1.09011 * 109.46901 * 149.99599 * 18 17 16 38 38 H 1.08004 * 120.08458 * 0.02562 * 20 19 17 39 39 H 1.08002 * 119.89338 * 180.25642 * 21 20 19 40 40 H 1.08001 * 119.81703 * 179.97438 * 22 21 20 41 41 H 1.08002 * 119.91708 * 179.97438 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1847 -0.0006 5 7 3.9774 0.5860 -1.2625 6 6 4.1633 -0.7657 -1.3498 7 1 3.8833 -1.2923 -2.2502 8 6 4.7131 -1.4627 -0.2787 9 7 4.5096 -2.7549 -0.1623 10 14 5.7410 -0.5608 0.9938 11 1 4.8837 -0.1855 2.1468 12 1 6.8389 -1.4452 1.4605 13 1 6.3174 0.6652 0.3858 14 6 4.2008 1.3677 -2.3375 15 8 4.0348 2.5715 -2.2599 16 6 4.6413 0.7703 -3.5969 17 6 4.8656 1.5535 -4.6736 18 6 5.3203 0.9376 -5.9717 19 6 4.6662 3.0077 -4.5796 20 6 5.7690 3.8656 -4.5068 21 6 5.5740 5.2276 -4.4246 22 6 4.2910 5.7479 -4.4080 23 6 3.1943 4.9073 -4.4743 24 6 3.3719 3.5408 -4.5584 25 17 1.9948 2.4871 -4.6408 26 1 -0.3634 0.5138 -0.8901 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3634 0.5139 0.8899 29 1 1.6886 1.8465 0.8899 30 1 1.6886 1.8463 -0.8901 31 1 3.8503 0.5539 0.8307 32 1 3.9784 2.1748 0.1066 33 1 4.8926 -3.2409 0.5846 34 1 4.7881 -0.2975 -3.6657 35 1 6.4095 0.9048 -5.9965 36 1 4.9244 -0.0748 -6.0519 37 1 4.9557 1.5374 -6.8057 38 1 6.7707 3.4620 -4.5198 39 1 6.4247 5.8910 -4.3725 40 1 4.1455 6.8161 -4.3430 41 1 2.1968 5.3211 -4.4604 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000837235242.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:05:23 Heat of formation + Delta-G solvation = -24.077938 kcal Electronic energy + Delta-G solvation = -25985.904089 eV Core-core repulsion = 22279.215716 eV Total energy + Delta-G solvation = -3706.688372 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 323.108 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -39.41295 -38.44709 -36.99736 -35.89979 -35.05849 -34.14380 -31.94475 -30.41519 -29.96250 -29.29445 -27.26862 -25.76963 -24.65992 -23.15514 -22.25040 -22.17326 -19.71817 -18.53048 -17.25060 -16.49294 -16.14256 -15.73925 -15.46160 -15.06014 -14.85675 -14.55592 -14.43306 -13.83382 -13.58642 -13.44095 -13.39155 -12.97378 -12.81635 -12.46586 -12.31828 -12.15856 -11.92904 -11.71250 -11.54162 -11.36969 -11.17379 -11.00569 -10.96243 -10.83466 -10.70646 -10.29885 -10.07181 -9.90467 -9.21617 -9.04303 -8.80354 -8.47055 -8.44088 -7.78555 -7.67782 -6.41438 -3.93594 1.50620 1.66106 2.06262 2.67454 3.09858 3.24494 3.31229 4.02343 4.16438 4.28799 4.41314 4.50718 4.97432 5.08915 5.14870 5.22648 5.51898 5.57891 5.65545 5.72012 5.73448 5.80541 5.86065 5.88234 5.90658 6.00245 6.03340 6.07532 6.17362 6.22961 6.26962 6.40902 6.50347 6.53979 6.66144 6.73582 6.99339 7.04758 7.21855 7.39264 7.83919 8.13990 8.31000 9.03844 9.43302 9.76466 10.69351 Molecular weight = 323.11amu Principal moments of inertia in cm(-1) A = 0.013367 B = 0.005399 C = 0.004816 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2094.246319 B = 5185.305776 C = 5812.354967 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.358 6.358 3 C 0.057 3.943 4 C 0.103 3.897 5 N -0.442 5.442 6 C -0.328 4.328 7 H 0.102 0.898 8 C 0.073 3.927 9 N -0.852 5.852 10 Si 0.870 3.130 11 H -0.275 1.275 12 H -0.288 1.288 13 H -0.262 1.262 14 C 0.496 3.504 15 O -0.588 6.588 16 C -0.128 4.128 17 C -0.080 4.080 18 C -0.104 4.104 19 C 0.011 3.989 20 C -0.102 4.102 21 C -0.120 4.120 22 C -0.122 4.122 23 C -0.114 4.114 24 C 0.013 3.987 25 Cl -0.074 7.074 26 H 0.032 0.968 27 H 0.080 0.920 28 H 0.029 0.971 29 H 0.040 0.960 30 H 0.050 0.950 31 H 0.075 0.925 32 H 0.082 0.918 33 H 0.273 0.727 34 H 0.137 0.863 35 H 0.069 0.931 36 H 0.070 0.930 37 H 0.061 0.939 38 H 0.122 0.878 39 H 0.119 0.881 40 H 0.120 0.880 41 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.325 10.533 -7.244 12.852 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.276 6.276 3 C -0.021 4.021 4 C -0.021 4.021 5 N -0.160 5.160 6 C -0.455 4.455 7 H 0.120 0.880 8 C -0.135 4.135 9 N -0.487 5.487 10 Si 0.697 3.303 11 H -0.202 1.202 12 H -0.215 1.215 13 H -0.186 1.186 14 C 0.288 3.712 15 O -0.475 6.475 16 C -0.149 4.149 17 C -0.083 4.083 18 C -0.161 4.161 19 C 0.010 3.990 20 C -0.121 4.121 21 C -0.138 4.138 22 C -0.140 4.140 23 C -0.133 4.133 24 C -0.014 4.014 25 Cl -0.045 7.045 26 H 0.050 0.950 27 H 0.099 0.901 28 H 0.048 0.952 29 H 0.058 0.942 30 H 0.069 0.931 31 H 0.093 0.907 32 H 0.100 0.900 33 H 0.084 0.916 34 H 0.154 0.846 35 H 0.088 0.912 36 H 0.089 0.911 37 H 0.080 0.920 38 H 0.140 0.860 39 H 0.137 0.863 40 H 0.138 0.862 41 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -1.403 10.628 -7.058 12.835 hybrid contribution 0.077 0.224 1.107 1.132 sum -1.326 10.851 -5.951 12.447 Atomic orbital electron populations 1.22643 0.83084 1.02010 0.98689 1.88204 1.17636 1.26730 1.95013 1.22841 0.94919 0.85109 0.99258 1.21698 0.92227 0.99043 0.89120 1.43493 1.56606 1.07437 1.08481 1.18918 1.41715 0.80136 1.04750 0.88028 1.25288 0.95975 0.95077 0.97131 1.69738 1.40213 1.08213 1.30512 0.87048 0.80704 0.80646 0.81858 1.20193 1.21464 1.18632 1.18218 0.81521 0.85972 0.85462 1.90721 1.57624 1.14232 1.84924 1.23157 0.98917 1.00493 0.92309 1.20740 1.00634 0.91289 0.95645 1.20713 1.01070 1.00640 0.93663 1.18501 0.91234 0.92782 0.96467 1.21035 0.97564 0.92851 1.00621 1.20925 0.96872 0.95040 1.00953 1.20919 0.92218 0.99036 1.01829 1.20760 0.99300 0.91373 1.01870 1.20795 0.87484 0.90511 1.02622 1.98342 1.42787 1.66899 1.96518 0.94959 0.90136 0.95249 0.94171 0.93125 0.90737 0.90002 0.91647 0.84565 0.91243 0.91099 0.91977 0.85988 0.86336 0.86222 0.86006 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.55 11.01 101.05 1.11 1.67 16 2 O -0.36 -7.89 10.37 -35.23 -0.37 -8.26 16 3 C 0.06 1.16 6.26 37.15 0.23 1.40 16 4 C 0.10 2.32 4.46 -4.05 -0.02 2.31 16 5 N -0.44 -10.73 2.13 -116.48 -0.25 -10.98 16 6 C -0.33 -8.59 8.57 -15.04 -0.13 -8.71 16 7 H 0.10 2.80 6.95 -52.49 -0.36 2.44 16 8 C 0.07 1.95 5.29 -17.44 -0.09 1.86 16 9 N -0.85 -23.69 13.95 55.50 0.77 -22.91 16 10 Si 0.87 20.68 25.05 -169.99 -4.26 16.42 16 11 H -0.27 -6.37 6.68 56.52 0.38 -5.99 16 12 H -0.29 -6.77 7.11 56.52 0.40 -6.37 16 13 H -0.26 -6.29 7.11 56.52 0.40 -5.89 16 14 C 0.50 11.44 7.16 -13.07 -0.09 11.35 16 15 O -0.59 -13.83 12.23 5.13 0.06 -13.76 16 16 C -0.13 -2.61 8.64 -37.54 -0.32 -2.93 16 17 C -0.08 -1.39 4.63 -102.18 -0.47 -1.87 16 18 C -0.10 -1.39 10.04 36.00 0.36 -1.03 16 19 C 0.01 0.19 3.35 -105.03 -0.35 -0.16 16 20 C -0.10 -1.60 9.80 -39.10 -0.38 -1.99 16 21 C -0.12 -1.66 10.03 -39.65 -0.40 -2.06 16 22 C -0.12 -1.67 10.04 -39.46 -0.40 -2.07 16 23 C -0.11 -1.76 9.82 -39.61 -0.39 -2.15 16 24 C 0.01 0.22 4.59 -38.99 -0.18 0.04 16 25 Cl -0.07 -1.31 27.22 -51.86 -1.41 -2.73 16 26 H 0.03 0.51 8.14 -51.92 -0.42 0.09 16 27 H 0.08 1.25 8.14 -51.93 -0.42 0.83 16 28 H 0.03 0.42 8.14 -51.93 -0.42 0.00 16 29 H 0.04 0.71 8.14 -51.93 -0.42 0.29 16 30 H 0.05 1.07 8.14 -51.93 -0.42 0.65 16 31 H 0.07 1.76 3.49 -51.92 -0.18 1.58 16 32 H 0.08 1.78 7.52 -51.93 -0.39 1.39 16 33 H 0.27 7.13 8.31 -40.82 -0.34 6.79 16 34 H 0.14 2.77 6.52 -52.48 -0.34 2.43 16 35 H 0.07 0.82 8.14 -51.93 -0.42 0.40 16 36 H 0.07 0.90 8.08 -51.93 -0.42 0.48 16 37 H 0.06 0.75 8.11 -51.92 -0.42 0.33 16 38 H 0.12 1.71 8.06 -52.48 -0.42 1.29 16 39 H 0.12 1.30 8.06 -52.49 -0.42 0.88 16 40 H 0.12 1.28 8.06 -52.49 -0.42 0.86 16 41 H 0.12 1.65 8.06 -52.49 -0.42 1.22 16 LS Contribution 355.57 15.07 5.36 5.36 Total: -1.00 -30.41 355.57 -7.11 -37.52 By element: Atomic # 1 Polarization: 9.18 SS G_CDS: -5.51 Total: 3.68 kcal Atomic # 6 Polarization: -2.83 SS G_CDS: -1.52 Total: -4.35 kcal Atomic # 7 Polarization: -34.42 SS G_CDS: 0.53 Total: -33.89 kcal Atomic # 8 Polarization: -21.72 SS G_CDS: -0.30 Total: -22.02 kcal Atomic # 14 Polarization: 20.68 SS G_CDS: -4.26 Total: 16.42 kcal Atomic # 17 Polarization: -1.31 SS G_CDS: -1.41 Total: -2.73 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -30.41 -7.11 -37.52 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000837235242.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.447 kcal (2) G-P(sol) polarization free energy of solvation -30.411 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.964 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.114 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.525 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.078 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds