Wall clock time and date at job start Tue Mar 31 2020 14:05:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.42902 * 114.00284 * 2 1 4 4 C 1.53003 * 109.46955 * 180.02562 * 3 2 1 5 5 N 1.46497 * 109.47094 * 65.00136 * 4 3 2 6 6 C 1.36717 * 120.00161 * 269.99912 * 5 4 3 7 7 H 1.07997 * 120.00453 * 138.02682 * 6 5 4 8 8 C 1.39113 * 119.99979 * 318.01921 * 6 5 4 9 9 N 1.31330 * 120.00178 * 350.59914 * 8 6 5 10 10 Si 1.86800 * 120.00310 * 170.59180 * 8 6 5 11 11 H 1.48503 * 109.46955 * 90.00182 * 10 8 6 12 12 H 1.48495 * 109.47598 * 210.00538 * 10 8 6 13 13 H 1.48506 * 109.47183 * 330.00661 * 10 8 6 14 14 C 1.34782 * 119.99935 * 89.99874 * 5 4 3 15 15 O 1.21769 * 119.99883 * 355.92218 * 14 5 4 16 16 C 1.46189 * 119.99895 * 175.92585 * 14 5 4 17 17 C 1.35020 * 119.99648 * 173.14766 * 16 14 5 18 18 C 1.50696 * 120.00395 * 351.09055 * 17 16 14 19 19 C 1.47087 * 119.99688 * 171.37013 * 17 16 14 20 20 C 1.39912 * 120.18453 * 104.72154 * 19 17 16 21 21 C 1.37827 * 119.83621 * 180.02562 * 20 19 17 22 22 C 1.38468 * 120.21025 * 359.97438 * 21 20 19 23 23 C 1.38332 * 120.37124 * 0.02667 * 22 21 20 24 24 C 1.38064 * 120.16216 * 359.67240 * 23 22 21 25 25 Cl 1.73596 * 120.10922 * 180.30129 * 24 23 22 26 26 H 1.08999 * 109.47485 * 180.02562 * 1 2 3 27 27 H 1.09002 * 109.46937 * 299.99651 * 1 2 3 28 28 H 1.08995 * 109.47366 * 59.99629 * 1 2 3 29 29 H 1.08996 * 109.46704 * 60.00375 * 3 2 1 30 30 H 1.08994 * 109.46935 * 300.00189 * 3 2 1 31 31 H 1.08993 * 109.47248 * 304.99981 * 4 3 2 32 32 H 1.09001 * 109.46641 * 184.99897 * 4 3 2 33 33 H 0.97002 * 120.00358 * 185.01163 * 9 8 6 34 34 H 1.07991 * 120.00057 * 353.14252 * 16 14 5 35 35 H 1.09000 * 109.46855 * 83.74536 * 18 17 16 36 36 H 1.09000 * 109.47126 * 203.74453 * 18 17 16 37 37 H 1.08998 * 109.47037 * 323.74471 * 18 17 16 38 38 H 1.07998 * 120.07804 * 359.97438 * 20 19 17 39 39 H 1.08001 * 119.89530 * 179.97438 * 21 20 19 40 40 H 1.08003 * 119.81245 * 180.02562 * 22 21 20 41 41 H 1.08001 * 119.91749 * 179.97438 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1845 -0.0006 5 7 3.9756 0.5643 -1.2527 6 6 4.0964 -0.7949 -1.3368 7 1 3.7550 -1.3138 -2.2203 8 6 4.6593 -1.5096 -0.2844 9 7 5.2408 -0.8721 0.7056 10 14 4.5880 -3.3763 -0.2792 11 1 5.7890 -3.9194 -0.9632 12 1 4.5523 -3.8664 1.1221 13 1 3.3659 -3.8270 -0.9925 14 6 4.2615 1.3337 -2.3218 15 8 4.0832 2.5372 -2.2710 16 6 4.7855 0.7233 -3.5424 17 6 4.9414 1.4692 -4.6570 18 6 4.3926 2.8718 -4.7079 19 6 5.6416 0.9107 -5.8238 20 6 4.9177 0.5000 -6.9484 21 6 5.5810 -0.0229 -8.0375 22 6 6.9604 -0.1421 -8.0218 23 6 7.6848 0.2612 -6.9144 24 6 7.0365 0.7928 -5.8175 25 17 7.9475 1.3058 -4.4317 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 0.5139 -0.8899 29 1 1.6887 1.8463 0.8900 30 1 1.6886 1.8463 -0.8899 31 1 3.8515 0.5681 0.8409 32 1 3.9786 2.1764 0.0889 33 1 5.6966 -1.3701 1.4021 34 1 5.0480 -0.3242 -3.5526 35 1 5.1061 3.5579 -4.2515 36 1 4.2254 3.1590 -5.7460 37 1 3.4495 2.9129 -4.1631 38 1 3.8417 0.5917 -6.9626 39 1 5.0231 -0.3406 -8.9060 40 1 7.4737 -0.5524 -8.8789 41 1 8.7604 0.1645 -6.9099 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000837235245.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:05:26 Heat of formation + Delta-G solvation = -37.654433 kcal Electronic energy + Delta-G solvation = -25186.913058 eV Core-core repulsion = 21479.635965 eV Total energy + Delta-G solvation = -3707.277093 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 323.108 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -39.34450 -38.57640 -36.96216 -36.12901 -35.04587 -33.95440 -31.52941 -30.73000 -29.92708 -29.18591 -26.86138 -25.75190 -24.61370 -23.44626 -22.45487 -21.86618 -19.68428 -18.64432 -16.96576 -16.25124 -16.23024 -15.47813 -15.39240 -15.29350 -14.98406 -14.44512 -14.29786 -14.05341 -13.77228 -13.45065 -13.35218 -13.27920 -12.62169 -12.25418 -12.19739 -11.87366 -11.51180 -11.43099 -11.33597 -11.26450 -11.11317 -11.01002 -10.96642 -10.88257 -10.59912 -10.49836 -10.29547 -10.01097 -9.03944 -8.92466 -8.90620 -8.62865 -8.27286 -8.20036 -7.35265 -6.26353 -4.00017 1.16431 1.28280 2.14632 2.40958 3.20053 3.26624 3.30835 3.65722 4.15144 4.45725 4.57947 4.69971 4.86524 4.94184 5.08715 5.18319 5.30916 5.42751 5.66599 5.70644 5.76501 5.82360 5.90698 6.01322 6.05489 6.12107 6.17072 6.29650 6.30992 6.41031 6.41453 6.48337 6.51649 6.76084 6.80969 6.85026 7.13897 7.29575 7.35412 7.58302 7.89134 8.08999 8.45337 9.16240 9.57435 9.99619 10.74458 Molecular weight = 323.11amu Principal moments of inertia in cm(-1) A = 0.012755 B = 0.004382 C = 0.003959 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2194.641073 B = 6388.676500 C = 7070.618217 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.362 6.362 3 C 0.055 3.945 4 C 0.107 3.893 5 N -0.417 5.417 6 C -0.313 4.313 7 H 0.084 0.916 8 C 0.049 3.951 9 N -0.869 5.869 10 Si 0.918 3.082 11 H -0.278 1.278 12 H -0.283 1.283 13 H -0.268 1.268 14 C 0.491 3.509 15 O -0.606 6.606 16 C -0.125 4.125 17 C -0.078 4.078 18 C -0.091 4.091 19 C -0.022 4.022 20 C -0.099 4.099 21 C -0.119 4.119 22 C -0.117 4.117 23 C -0.113 4.113 24 C -0.026 4.026 25 Cl -0.055 7.055 26 H 0.076 0.924 27 H 0.029 0.971 28 H 0.030 0.970 29 H 0.037 0.963 30 H 0.038 0.962 31 H 0.123 0.877 32 H 0.069 0.931 33 H 0.270 0.730 34 H 0.125 0.875 35 H 0.070 0.930 36 H 0.038 0.962 37 H 0.084 0.916 38 H 0.132 0.868 39 H 0.126 0.874 40 H 0.127 0.873 41 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.393 0.829 -11.640 11.676 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.280 6.280 3 C -0.023 4.023 4 C -0.017 4.017 5 N -0.133 5.133 6 C -0.441 4.441 7 H 0.102 0.898 8 C -0.156 4.156 9 N -0.506 5.506 10 Si 0.744 3.256 11 H -0.204 1.204 12 H -0.208 1.208 13 H -0.193 1.193 14 C 0.283 3.717 15 O -0.495 6.495 16 C -0.146 4.146 17 C -0.081 4.081 18 C -0.147 4.147 19 C -0.023 4.023 20 C -0.117 4.117 21 C -0.137 4.137 22 C -0.135 4.135 23 C -0.132 4.132 24 C -0.052 4.052 25 Cl -0.026 7.026 26 H 0.095 0.905 27 H 0.047 0.953 28 H 0.049 0.951 29 H 0.055 0.945 30 H 0.057 0.943 31 H 0.140 0.860 32 H 0.087 0.913 33 H 0.080 0.920 34 H 0.143 0.857 35 H 0.088 0.912 36 H 0.057 0.943 37 H 0.103 0.897 38 H 0.150 0.850 39 H 0.144 0.856 40 H 0.145 0.855 41 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -0.258 1.213 -11.190 11.259 hybrid contribution -0.108 -0.917 0.238 0.953 sum -0.366 0.296 -10.953 10.963 Atomic orbital electron populations 1.22633 0.83656 1.01637 0.98719 1.88159 1.17140 1.27731 1.94992 1.23010 0.96672 0.84237 0.98365 1.21628 0.89137 0.99129 0.91773 1.43173 1.54744 1.06146 1.09269 1.19262 1.39551 0.80985 1.04331 0.89810 1.25413 0.94549 1.00017 0.95605 1.69614 1.32522 1.36175 1.12291 0.86073 0.78729 0.83076 0.77693 1.20431 1.20804 1.19291 1.18293 0.81751 0.86054 0.85616 1.90624 1.59389 1.14802 1.84640 1.22955 0.99818 0.99773 0.92029 1.20644 0.98783 0.96830 0.91818 1.20757 1.02536 0.92074 0.99335 1.18920 0.90898 0.97805 0.94706 1.21338 1.00158 0.98162 0.92019 1.21121 0.94496 0.99605 0.98454 1.21110 0.94175 1.00386 0.97822 1.20966 1.00393 0.99440 0.92394 1.21244 0.91616 1.02041 0.90335 1.98405 1.73569 1.89175 1.41418 0.90515 0.95263 0.95096 0.94469 0.94343 0.85953 0.91299 0.91982 0.85736 0.91163 0.94339 0.89705 0.85048 0.85605 0.85499 0.85124 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.50 11.01 101.05 1.11 1.62 16 2 O -0.36 -7.88 10.17 -35.23 -0.36 -8.23 16 3 C 0.05 1.16 6.28 37.16 0.23 1.40 16 4 C 0.11 2.59 5.38 -4.04 -0.02 2.57 16 5 N -0.42 -10.64 2.48 -116.48 -0.29 -10.93 16 6 C -0.31 -8.08 7.68 -15.05 -0.12 -8.19 16 7 H 0.08 2.12 7.21 -52.49 -0.38 1.74 16 8 C 0.05 1.27 5.20 -17.44 -0.09 1.18 16 9 N -0.87 -23.18 11.06 55.50 0.61 -22.57 16 10 Si 0.92 20.23 29.57 -169.99 -5.03 15.21 16 11 H -0.28 -6.06 7.11 56.52 0.40 -5.66 16 12 H -0.28 -6.23 7.11 56.52 0.40 -5.82 16 13 H -0.27 -5.86 7.11 56.52 0.40 -5.45 16 14 C 0.49 12.09 7.39 -13.07 -0.10 12.00 16 15 O -0.61 -15.43 13.03 5.13 0.07 -15.36 16 16 C -0.13 -2.70 8.64 -37.54 -0.32 -3.03 16 17 C -0.08 -1.45 4.60 -102.18 -0.47 -1.92 16 18 C -0.09 -1.64 8.44 36.00 0.30 -1.33 16 19 C -0.02 -0.36 5.25 -105.03 -0.55 -0.91 16 20 C -0.10 -1.31 9.80 -39.11 -0.38 -1.69 16 21 C -0.12 -1.30 10.03 -39.65 -0.40 -1.70 16 22 C -0.12 -1.25 10.04 -39.46 -0.40 -1.65 16 23 C -0.11 -1.42 9.82 -39.61 -0.39 -1.81 16 24 C -0.03 -0.40 6.36 -38.99 -0.25 -0.64 16 25 Cl -0.05 -0.93 27.83 -51.86 -1.44 -2.37 16 26 H 0.08 1.12 8.14 -51.93 -0.42 0.70 16 27 H 0.03 0.42 8.14 -51.93 -0.42 -0.01 16 28 H 0.03 0.47 8.14 -51.93 -0.42 0.05 16 29 H 0.04 0.69 8.14 -51.93 -0.42 0.27 16 30 H 0.04 0.83 8.14 -51.93 -0.42 0.41 16 31 H 0.12 3.19 5.37 -51.93 -0.28 2.92 16 32 H 0.07 1.67 7.48 -51.93 -0.39 1.28 16 33 H 0.27 6.83 8.31 -40.82 -0.34 6.49 16 34 H 0.12 2.74 6.83 -52.49 -0.36 2.38 16 35 H 0.07 1.34 7.97 -51.93 -0.41 0.93 16 36 H 0.04 0.58 8.07 -51.93 -0.42 0.16 16 37 H 0.08 1.68 6.38 -51.93 -0.33 1.35 16 38 H 0.13 1.57 8.06 -52.49 -0.42 1.14 16 39 H 0.13 1.02 8.06 -52.49 -0.42 0.60 16 40 H 0.13 0.99 8.06 -52.48 -0.42 0.56 16 41 H 0.13 1.38 8.06 -52.49 -0.42 0.96 16 LS Contribution 361.93 15.07 5.45 5.45 Total: -1.00 -29.60 361.93 -8.33 -37.93 By element: Atomic # 1 Polarization: 10.50 SS G_CDS: -5.51 Total: 4.99 kcal Atomic # 6 Polarization: -2.28 SS G_CDS: -1.83 Total: -4.12 kcal Atomic # 7 Polarization: -33.82 SS G_CDS: 0.33 Total: -33.50 kcal Atomic # 8 Polarization: -23.31 SS G_CDS: -0.29 Total: -23.60 kcal Atomic # 14 Polarization: 20.23 SS G_CDS: -5.03 Total: 15.21 kcal Atomic # 17 Polarization: -0.93 SS G_CDS: -1.44 Total: -2.37 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -29.60 -8.33 -37.93 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000837235245.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.275 kcal (2) G-P(sol) polarization free energy of solvation -29.604 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.329 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.325 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.929 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.654 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds