Wall clock time and date at job start Tue Mar 31 2020 13:34:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.30996 * 1 3 3 C 1.50704 * 119.99550 * 2 1 4 4 O 1.42902 * 109.47019 * 135.00185 * 3 2 1 5 5 C 1.35918 * 117.00319 * 179.97438 * 4 3 2 6 6 C 1.38708 * 120.05671 * 0.02562 * 5 4 3 7 7 C 1.38155 * 119.95940 * 180.02562 * 6 5 4 8 8 C 1.38283 * 120.07236 * 359.97438 * 7 6 5 9 9 C 1.50701 * 119.93593 * 179.97438 * 8 7 6 10 10 N 1.46895 * 109.47040 * 90.00501 * 9 8 7 11 11 C 1.47482 * 111.00527 * 74.02624 * 10 9 8 12 12 C 1.53512 * 87.93484 * 138.70218 * 11 10 9 13 13 O 1.42898 * 114.16926 * 87.62293 * 12 11 10 14 14 C 1.50697 * 114.34473 * 220.31760 * 12 11 10 15 15 H 1.08003 * 119.99989 * 93.92306 * 14 12 11 16 16 C 1.37879 * 119.99910 * 273.92405 * 14 12 11 17 17 N 1.31512 * 119.99736 * 359.97438 * 16 14 12 18 18 Si 1.86799 * 119.99823 * 179.97438 * 16 14 12 19 19 H 1.48499 * 109.47086 * 60.00307 * 18 16 14 20 20 H 1.48510 * 109.46932 * 180.02562 * 18 16 14 21 21 H 1.48502 * 109.47166 * 299.99785 * 18 16 14 22 22 C 1.47486 * 111.00228 * 169.99690 * 10 9 8 23 23 C 1.38240 * 120.12080 * 359.97438 * 8 7 6 24 24 C 1.38254 * 120.04256 * 0.02562 * 23 8 7 25 25 Cl 1.73609 * 120.03885 * 179.97438 * 24 23 8 26 26 H 1.07999 * 120.00625 * 359.97438 * 1 2 3 27 27 H 1.08003 * 120.00107 * 180.02562 * 1 2 3 28 28 H 1.07993 * 120.00439 * 179.97438 * 2 1 3 29 29 H 1.09001 * 109.47408 * 15.00128 * 3 2 1 30 30 H 1.09001 * 109.46852 * 254.99803 * 3 2 1 31 31 H 1.08003 * 120.02401 * 359.97438 * 6 5 4 32 32 H 1.07992 * 119.96641 * 179.72231 * 7 6 5 33 33 H 1.09007 * 109.46763 * 210.00067 * 9 8 7 34 34 H 1.08998 * 109.47210 * 329.99915 * 9 8 7 35 35 H 1.09000 * 113.47551 * 253.46991 * 11 10 9 36 36 H 1.08996 * 113.47073 * 23.93211 * 11 10 9 37 37 H 0.96696 * 114.00179 * 86.15827 * 13 12 11 38 38 H 0.97004 * 119.99585 * 179.97438 * 17 16 14 39 39 H 1.09000 * 113.47268 * 336.06686 * 22 10 9 40 40 H 1.08999 * 113.47262 * 106.46494 * 22 10 9 41 41 H 1.08005 * 119.97950 * 179.97438 * 23 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0634 1.3052 0.0000 4 8 3.1266 1.2414 0.9527 5 6 3.9097 2.3452 1.0783 6 6 3.6596 3.4666 0.3011 7 6 4.4572 4.5873 0.4300 8 6 5.5042 4.5924 1.3334 9 6 6.3726 5.8163 1.4711 10 7 5.8075 6.7050 2.4952 11 6 6.0383 6.1660 3.8485 12 6 6.3637 7.5960 4.3022 13 8 5.2240 8.3522 4.7159 14 6 7.5232 7.6952 5.2597 15 1 8.5175 7.8892 4.8854 16 6 7.3146 7.5383 6.6135 17 7 6.1037 7.3025 7.0692 18 14 8.7519 7.6606 7.8003 19 1 9.3748 9.0039 7.6867 20 1 8.2663 7.4555 9.1887 21 1 9.7573 6.6190 7.4692 22 6 6.7469 7.7919 2.8287 23 6 5.7556 3.4770 2.1102 24 6 4.9606 2.3528 1.9852 25 17 5.2769 0.9518 2.9604 26 1 -0.5401 0.9352 0.0004 27 1 -0.5400 -0.9353 0.0004 28 1 1.8500 -0.9352 0.0004 29 1 1.3854 2.1162 0.2660 30 1 2.4754 1.4868 -0.9927 31 1 2.8423 3.4634 -0.4050 32 1 4.2653 5.4588 -0.1782 33 1 7.3786 5.5168 1.7650 34 1 6.4141 6.3416 0.5169 35 1 5.1405 5.7571 4.3120 36 1 6.8895 5.4878 3.9063 37 1 4.9848 8.2270 5.6444 38 1 5.9570 7.1918 8.0217 39 1 7.7873 7.5476 2.6143 40 1 6.4501 8.7607 2.4269 41 1 6.5742 3.4833 2.8148 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000190979580.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:34:01 Heat of formation + Delta-G solvation = -5.846326 kcal Electronic energy + Delta-G solvation = -24427.798021 eV Core-core repulsion = 20721.900230 eV Total energy + Delta-G solvation = -3705.897790 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 323.108 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -40.37244 -39.26609 -37.71469 -36.29710 -34.57298 -34.16122 -32.06077 -31.24782 -30.84084 -28.04149 -26.82765 -25.46816 -24.87851 -22.89073 -22.65072 -20.83480 -20.24553 -18.65265 -18.32745 -17.30254 -16.66077 -16.15486 -15.85629 -15.09685 -15.01957 -14.97014 -14.47610 -14.27615 -13.97600 -13.82312 -13.67596 -13.06192 -13.02577 -12.79127 -12.32173 -12.02450 -11.64639 -11.60974 -11.53054 -11.39778 -11.17304 -11.10256 -11.01702 -10.81089 -10.70950 -10.55330 -10.26831 -10.00314 -9.86615 -9.31453 -8.83802 -8.65311 -8.26684 -8.00008 -7.89231 -6.26596 -4.36636 1.20281 1.32390 1.70264 2.26898 3.11783 3.21231 3.27038 3.28961 3.62206 4.25321 4.44273 4.66120 4.73353 4.81449 4.87331 4.92493 5.00482 5.08866 5.16767 5.33077 5.38002 5.45869 5.58065 5.81316 5.85134 5.94876 6.05699 6.06907 6.14327 6.17296 6.23761 6.30789 6.38859 6.63037 6.66394 6.68795 7.06045 7.13207 7.19817 7.34753 7.76650 7.92808 8.01684 8.65220 9.33555 9.68913 10.79342 Molecular weight = 323.11amu Principal moments of inertia in cm(-1) A = 0.017395 B = 0.002980 C = 0.002795 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1609.293253 B = 9392.749060 C =10013.962427 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.154 4.154 3 C 0.086 3.914 4 O -0.302 6.302 5 C 0.130 3.870 6 C -0.200 4.200 7 C -0.057 4.057 8 C -0.087 4.087 9 C 0.057 3.943 10 N -0.465 5.465 11 C -0.018 4.018 12 C 0.248 3.752 13 O -0.570 6.570 14 C -0.536 4.536 15 H 0.066 0.934 16 C 0.071 3.929 17 N -0.897 5.897 18 Si 0.904 3.096 19 H -0.274 1.274 20 H -0.285 1.285 21 H -0.275 1.275 22 C 0.002 3.998 23 C -0.062 4.062 24 C -0.065 4.065 25 Cl -0.063 7.063 26 H 0.100 0.900 27 H 0.107 0.893 28 H 0.120 0.880 29 H 0.069 0.931 30 H 0.072 0.928 31 H 0.133 0.867 32 H 0.131 0.869 33 H 0.047 0.953 34 H 0.077 0.923 35 H 0.068 0.932 36 H 0.058 0.942 37 H 0.390 0.610 38 H 0.272 0.728 39 H 0.065 0.935 40 H 0.072 0.928 41 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.147 -12.045 -14.269 19.659 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.172 4.172 3 C 0.011 3.989 4 O -0.216 6.216 5 C 0.084 3.916 6 C -0.219 4.219 7 C -0.076 4.076 8 C -0.088 4.088 9 C -0.071 4.071 10 N -0.188 5.188 11 C -0.148 4.148 12 C 0.206 3.794 13 O -0.383 6.383 14 C -0.574 4.574 15 H 0.084 0.916 16 C -0.131 4.131 17 N -0.537 5.537 18 Si 0.731 3.269 19 H -0.199 1.199 20 H -0.210 1.210 21 H -0.200 1.200 22 C -0.126 4.126 23 C -0.081 4.081 24 C -0.092 4.092 25 Cl -0.034 7.034 26 H 0.118 0.882 27 H 0.125 0.875 28 H 0.138 0.862 29 H 0.087 0.913 30 H 0.090 0.910 31 H 0.151 0.849 32 H 0.149 0.851 33 H 0.065 0.935 34 H 0.096 0.904 35 H 0.086 0.914 36 H 0.076 0.924 37 H 0.246 0.754 38 H 0.083 0.917 39 H 0.083 0.917 40 H 0.090 0.910 41 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -6.884 -12.056 -14.786 20.282 hybrid contribution 1.433 -0.546 1.346 2.041 sum -5.451 -12.602 -13.440 19.214 Atomic orbital electron populations 1.23887 0.95419 1.02594 0.99008 1.22654 0.95637 0.97772 1.01122 1.21847 0.87960 0.96954 0.92171 1.86149 1.41900 1.35037 1.58487 1.18562 0.91004 0.86902 0.95170 1.21124 1.03651 0.93693 1.03445 1.20907 0.92893 0.96933 0.96856 1.19678 0.97707 0.94757 0.96626 1.21597 0.94968 0.91716 0.98833 1.69077 1.39875 1.06652 1.03174 1.24673 0.99569 1.01840 0.88681 1.19341 0.85051 0.86018 0.88951 1.86023 1.48189 1.69128 1.34943 1.21529 0.94289 1.49855 0.91720 0.91622 1.25063 0.96311 0.93339 0.98381 1.69285 1.20553 1.48703 1.15183 0.86464 0.82046 0.78838 0.79561 1.19939 1.20995 1.20041 1.24102 0.94430 0.95656 0.98438 1.20900 0.98671 0.90426 0.98143 1.20082 0.98939 0.91340 0.98832 1.98353 1.95107 1.40401 1.69554 0.88174 0.87459 0.86245 0.91296 0.90983 0.84921 0.85077 0.93462 0.90446 0.91392 0.92403 0.75409 0.91739 0.91736 0.90993 0.84371 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.15 14.31 29.02 0.42 -0.74 16 2 C -0.15 -1.25 9.89 -36.02 -0.36 -1.61 16 3 C 0.09 0.79 5.15 36.01 0.19 0.98 16 4 O -0.30 -3.91 9.58 -19.48 -0.19 -4.09 16 5 C 0.13 1.81 6.68 -39.20 -0.26 1.55 16 6 C -0.20 -2.48 9.04 -39.44 -0.36 -2.84 16 7 C -0.06 -0.77 9.69 -39.60 -0.38 -1.15 16 8 C -0.09 -1.33 5.18 -104.60 -0.54 -1.87 16 9 C 0.06 0.93 4.97 -4.98 -0.02 0.90 16 10 N -0.47 -9.46 6.40 -246.07 -1.58 -11.03 16 11 C -0.02 -0.42 6.24 -7.54 -0.05 -0.47 16 12 C 0.25 6.23 1.56 -91.24 -0.14 6.09 16 13 O -0.57 -15.50 13.53 -35.23 -0.48 -15.97 16 14 C -0.54 -14.13 8.69 -34.44 -0.30 -14.43 16 15 H 0.07 1.68 7.81 -52.48 -0.41 1.27 16 16 C 0.07 1.87 5.39 -17.82 -0.10 1.77 16 17 N -0.90 -24.07 11.02 55.43 0.61 -23.46 16 18 Si 0.90 20.30 29.54 -169.99 -5.02 15.28 16 19 H -0.27 -6.12 7.11 56.52 0.40 -5.72 16 20 H -0.28 -6.35 7.11 56.52 0.40 -5.95 16 21 H -0.28 -6.11 7.11 56.52 0.40 -5.71 16 22 C 0.00 0.05 7.12 -7.54 -0.05 0.00 16 23 C -0.06 -0.97 8.89 -39.57 -0.35 -1.33 16 24 C -0.06 -0.99 6.33 -39.36 -0.25 -1.24 16 25 Cl -0.06 -0.93 28.51 -51.86 -1.48 -2.41 16 26 H 0.10 0.60 7.90 -52.49 -0.41 0.18 16 27 H 0.11 0.57 8.06 -52.48 -0.42 0.15 16 28 H 0.12 0.94 8.06 -52.49 -0.42 0.51 16 29 H 0.07 0.59 7.38 -51.93 -0.38 0.20 16 30 H 0.07 0.56 7.66 -51.93 -0.40 0.16 16 31 H 0.13 1.25 6.30 -52.48 -0.33 0.92 16 32 H 0.13 1.53 8.06 -52.49 -0.42 1.11 16 33 H 0.05 0.75 7.50 -51.93 -0.39 0.37 16 34 H 0.08 1.11 8.08 -51.93 -0.42 0.69 16 35 H 0.07 1.68 8.14 -51.93 -0.42 1.26 16 36 H 0.06 1.29 7.30 -51.93 -0.38 0.91 16 37 H 0.39 10.81 6.33 45.56 0.29 11.09 16 38 H 0.27 6.96 8.31 -40.82 -0.34 6.62 16 39 H 0.06 1.27 7.73 -51.93 -0.40 0.87 16 40 H 0.07 1.52 8.14 -51.93 -0.42 1.09 16 41 H 0.14 2.16 7.70 -52.48 -0.40 1.76 16 LS Contribution 359.53 15.07 5.42 5.42 Total: -1.00 -28.71 359.53 -10.16 -38.87 By element: Atomic # 1 Polarization: 16.67 SS G_CDS: -4.89 Total: 11.78 kcal Atomic # 6 Polarization: -11.81 SS G_CDS: -2.56 Total: -14.38 kcal Atomic # 7 Polarization: -33.53 SS G_CDS: -0.97 Total: -34.49 kcal Atomic # 8 Polarization: -19.40 SS G_CDS: -0.66 Total: -20.07 kcal Atomic # 14 Polarization: 20.30 SS G_CDS: -5.02 Total: 15.28 kcal Atomic # 17 Polarization: -0.93 SS G_CDS: -1.48 Total: -2.41 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -28.71 -10.16 -38.87 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000190979580.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.025 kcal (2) G-P(sol) polarization free energy of solvation -28.706 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.319 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.165 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.871 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.846 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds