Wall clock time and date at job start Tue Mar 31 2020 14:48:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.38360 * 119.91956 * 2 1 4 4 C 1.38452 * 120.27678 * 179.97438 * 3 2 1 5 5 Cl 1.73601 * 119.93973 * 180.02562 * 4 3 2 6 6 C 1.38100 * 120.11970 * 0.04771 * 4 3 2 7 7 C 1.39545 * 119.83821 * 359.97212 * 6 4 3 8 8 C 1.47848 * 120.13797 * 179.97438 * 7 6 4 9 9 O 1.21549 * 119.99920 * 131.77560 * 8 7 6 10 10 N 1.34779 * 120.00045 * 311.77921 * 8 7 6 11 11 C 1.46500 * 119.99945 * 4.96688 * 10 8 7 12 12 C 1.50703 * 109.46968 * 95.76871 * 11 10 8 13 13 H 1.08003 * 119.99885 * 359.97438 * 12 11 10 14 14 C 1.37876 * 119.99875 * 179.97438 * 12 11 10 15 15 N 1.31523 * 119.99864 * 179.97438 * 14 12 11 16 16 Si 1.86794 * 120.00351 * 0.02562 * 14 12 11 17 17 H 1.48505 * 109.47312 * 89.99700 * 16 14 12 18 18 H 1.48498 * 109.47482 * 209.99814 * 16 14 12 19 19 H 1.48502 * 109.46979 * 329.99829 * 16 14 12 20 20 C 1.46496 * 119.99954 * 184.97119 * 10 8 7 21 21 C 1.53002 * 109.47079 * 89.99845 * 20 10 8 22 22 C 1.53000 * 109.47003 * 179.97438 * 21 20 10 23 23 C 1.53002 * 109.47356 * 65.00002 * 22 21 20 24 24 C 1.53003 * 109.47133 * 184.99876 * 22 21 20 25 25 C 1.37941 * 119.91633 * 180.02562 * 2 1 3 26 26 H 1.08996 * 109.46735 * 269.97691 * 1 2 3 27 27 H 1.08995 * 109.46959 * 29.97279 * 1 2 3 28 28 H 1.08993 * 109.47253 * 149.97581 * 1 2 3 29 29 H 1.07995 * 119.86117 * 359.97438 * 3 2 1 30 30 H 1.07995 * 120.08158 * 180.25708 * 6 4 3 31 31 H 1.08993 * 109.47255 * 215.76772 * 11 10 8 32 32 H 1.09007 * 109.47248 * 335.77284 * 11 10 8 33 33 H 0.96996 * 120.00081 * 179.97438 * 15 14 12 34 34 H 1.09002 * 109.47267 * 209.99700 * 20 10 8 35 35 H 1.09001 * 109.47404 * 330.00019 * 20 10 8 36 36 H 1.08994 * 109.47205 * 299.99789 * 21 20 10 37 37 H 1.09002 * 109.46957 * 60.00387 * 21 20 10 38 38 H 1.09001 * 109.47198 * 304.99852 * 22 21 20 39 39 H 1.08997 * 109.46678 * 59.99571 * 23 22 21 40 40 H 1.08998 * 109.47199 * 180.02562 * 23 22 21 41 41 H 1.09002 * 109.46581 * 300.00004 * 23 22 21 42 42 H 1.09005 * 109.46694 * 60.00150 * 24 22 21 43 43 H 1.08998 * 109.46993 * 179.97438 * 24 22 21 44 44 H 1.08989 * 109.47366 * 300.00296 * 24 22 21 45 45 H 1.07999 * 120.06591 * 0.02562 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1972 1.1992 0.0000 4 6 3.5817 1.2078 0.0005 5 17 4.4387 2.7175 0.0012 6 6 4.2821 0.0176 0.0001 7 6 3.5910 -1.1947 -0.0003 8 6 4.3342 -2.4728 -0.0014 9 8 4.0338 -3.3511 0.7832 10 7 5.3449 -2.6639 -0.8724 11 6 5.7786 -1.5685 -1.7430 12 6 6.9529 -0.8627 -1.1153 13 1 7.3373 -1.1965 -0.1629 14 6 7.5363 0.2092 -1.7570 15 7 8.5608 0.8254 -1.2089 16 14 6.8709 0.7870 -3.4040 17 1 5.8191 1.8113 -3.1811 18 1 7.9741 1.3764 -4.2044 19 1 6.2904 -0.3675 -4.1358 20 6 6.0097 -3.9672 -0.9484 21 6 5.2958 -4.8445 -1.9788 22 6 5.9905 -6.2053 -2.0587 23 6 5.8325 -6.9377 -0.7246 24 6 5.3561 -7.0370 -3.1753 25 6 2.1950 -1.1956 -0.0005 26 1 -0.3633 -0.0004 1.0277 27 1 -0.3633 0.8902 -0.5134 28 1 -0.3633 -0.8897 -0.5142 29 1 1.6536 2.1324 -0.0004 30 1 5.3620 0.0251 0.0047 31 1 6.0720 -1.9697 -2.7130 32 1 4.9585 -0.8625 -1.8748 33 1 8.9716 1.5792 -1.6605 34 1 7.0487 -3.8282 -1.2471 35 1 5.9738 -4.4509 0.0277 36 1 4.2568 -4.9835 -1.6801 37 1 5.3317 -4.3608 -2.9550 38 1 7.0499 -6.0606 -2.2705 39 1 4.7732 -7.0823 -0.5129 40 1 6.3278 -7.9070 -0.7814 41 1 6.2845 -6.3451 0.0708 42 1 5.4687 -6.5152 -4.1257 43 1 5.8513 -8.0063 -3.2325 44 1 4.2968 -7.1817 -2.9635 45 1 1.6547 -2.1307 -0.0014 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000152416383.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:48:48 Heat of formation + Delta-G solvation = -39.442386 kcal Electronic energy + Delta-G solvation = -25758.980174 eV Core-core repulsion = 22187.458644 eV Total energy + Delta-G solvation = -3571.521530 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 323.139 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -39.99871 -38.33788 -36.59354 -36.03319 -35.00840 -32.71776 -32.49222 -30.73991 -29.37880 -27.62898 -27.06242 -26.76852 -24.25004 -22.82335 -21.97995 -21.47718 -19.83354 -18.61813 -17.13092 -16.63561 -16.24432 -15.77552 -15.23397 -15.07094 -14.63734 -14.47763 -14.08456 -13.82399 -13.45169 -13.38486 -13.18733 -12.98751 -12.70784 -12.56226 -12.35489 -12.29345 -12.13598 -11.82376 -11.72392 -11.47442 -11.12840 -11.07241 -11.00225 -10.95132 -10.82055 -10.63042 -10.50201 -10.48741 -10.27088 -10.19005 -9.67865 -9.29504 -8.78883 -8.52894 -8.29643 -7.82312 -6.28736 -4.31112 1.21653 1.51125 2.50942 3.16893 3.21627 3.23192 3.26862 3.66287 3.99375 4.22966 4.87257 4.89755 5.01507 5.03033 5.07167 5.10097 5.24308 5.34714 5.43193 5.58406 5.60131 5.67302 5.68551 5.77434 5.83650 5.85833 5.92796 5.94836 5.96954 6.05230 6.14513 6.20794 6.28757 6.33368 6.42412 6.51444 6.55543 6.58836 6.60002 6.68326 6.76965 7.10473 7.26035 7.38366 8.01099 8.33166 8.72071 8.80445 9.30108 10.82430 Molecular weight = 323.14amu Principal moments of inertia in cm(-1) A = 0.009891 B = 0.005439 C = 0.003935 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2830.314720 B = 5146.411906 C = 7114.655520 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.107 4.107 2 C -0.097 4.097 3 C -0.100 4.100 4 C -0.042 4.042 5 Cl -0.067 7.067 6 C -0.075 4.075 7 C -0.108 4.108 8 C 0.561 3.439 9 O -0.559 6.559 10 N -0.581 5.581 11 C 0.200 3.800 12 C -0.549 4.549 13 H 0.082 0.918 14 C 0.089 3.911 15 N -0.879 5.879 16 Si 0.856 3.144 17 H -0.264 1.264 18 H -0.282 1.282 19 H -0.264 1.264 20 C 0.118 3.882 21 C -0.128 4.128 22 C -0.094 4.094 23 C -0.148 4.148 24 C -0.145 4.145 25 C -0.074 4.074 26 H 0.070 0.930 27 H 0.066 0.934 28 H 0.067 0.933 29 H 0.129 0.871 30 H 0.185 0.815 31 H 0.033 0.967 32 H 0.036 0.964 33 H 0.268 0.732 34 H 0.082 0.918 35 H 0.079 0.921 36 H 0.061 0.939 37 H 0.062 0.938 38 H 0.071 0.929 39 H 0.053 0.947 40 H 0.049 0.951 41 H 0.060 0.940 42 H 0.052 0.948 43 H 0.051 0.949 44 H 0.052 0.948 45 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.370 -4.838 -1.826 12.491 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.164 4.164 2 C -0.097 4.097 3 C -0.119 4.119 4 C -0.068 4.068 5 Cl -0.038 7.038 6 C -0.093 4.093 7 C -0.111 4.111 8 C 0.349 3.651 9 O -0.440 6.440 10 N -0.309 5.309 11 C 0.079 3.921 12 C -0.587 4.587 13 H 0.100 0.900 14 C -0.117 4.117 15 N -0.515 5.515 16 Si 0.682 3.318 17 H -0.189 1.189 18 H -0.207 1.207 19 H -0.188 1.188 20 C -0.005 4.005 21 C -0.167 4.167 22 C -0.113 4.113 23 C -0.205 4.205 24 C -0.202 4.202 25 C -0.093 4.093 26 H 0.089 0.911 27 H 0.085 0.915 28 H 0.086 0.914 29 H 0.147 0.853 30 H 0.202 0.798 31 H 0.051 0.949 32 H 0.054 0.946 33 H 0.078 0.922 34 H 0.101 0.899 35 H 0.097 0.903 36 H 0.080 0.920 37 H 0.081 0.919 38 H 0.090 0.910 39 H 0.072 0.928 40 H 0.068 0.932 41 H 0.079 0.921 42 H 0.072 0.928 43 H 0.070 0.930 44 H 0.071 0.929 45 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -11.274 -4.997 -1.469 12.419 hybrid contribution -0.008 0.765 -1.008 1.266 sum -11.282 -4.232 -2.477 12.302 Atomic orbital electron populations 1.20722 0.90557 1.02734 1.02353 1.19628 0.96121 0.92121 1.01874 1.21006 0.92056 0.98336 1.00517 1.20833 0.92070 0.87814 1.06110 1.98372 1.77419 1.31067 1.96927 1.22527 1.04811 0.89022 0.92932 1.19875 0.93738 0.93578 1.03915 1.18167 0.80147 0.86225 0.80532 1.90698 1.68571 1.44864 1.39862 1.47842 1.32326 1.12967 1.37803 1.20033 0.96225 0.85447 0.90363 1.21286 1.14172 1.14782 1.08419 0.89988 1.24789 0.94204 0.95703 0.96997 1.69874 1.21654 1.21282 1.38646 0.87121 0.79711 0.80222 0.84753 1.18896 1.20736 1.18830 1.21439 0.96595 0.82698 0.99773 1.22008 1.00039 0.94769 0.99882 1.21049 1.00163 0.94688 0.95395 1.21881 1.01780 0.99674 0.97163 1.21822 1.00633 0.99438 0.98307 1.21043 0.92518 0.97942 0.97807 0.91146 0.91544 0.91436 0.85289 0.79811 0.94896 0.94635 0.92168 0.89933 0.90273 0.92010 0.91924 0.91022 0.92788 0.93211 0.92140 0.92841 0.92973 0.92921 0.85362 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.07 10.01 36.01 0.36 -0.71 16 2 C -0.10 -1.36 5.87 -104.68 -0.61 -1.98 16 3 C -0.10 -1.49 9.47 -39.46 -0.37 -1.87 16 4 C -0.04 -0.75 6.31 -39.55 -0.25 -1.00 16 5 Cl -0.07 -1.20 28.95 -51.86 -1.50 -2.70 16 6 C -0.07 -1.50 7.29 -39.14 -0.29 -1.78 16 7 C -0.11 -2.08 4.95 -104.97 -0.52 -2.60 16 8 C 0.56 11.70 7.24 -12.33 -0.09 11.61 16 9 O -0.56 -12.49 16.57 5.32 0.09 -12.41 16 10 N -0.58 -11.84 2.46 -176.17 -0.43 -12.27 16 11 C 0.20 4.39 3.73 -5.19 -0.02 4.37 16 12 C -0.55 -13.86 7.40 -34.44 -0.25 -14.11 16 13 H 0.08 2.32 8.06 -52.48 -0.42 1.90 16 14 C 0.09 2.31 5.47 -17.82 -0.10 2.22 16 15 N -0.88 -24.59 13.96 55.43 0.77 -23.81 16 16 Si 0.86 19.60 27.47 -169.99 -4.67 14.94 16 17 H -0.26 -5.98 7.11 56.52 0.40 -5.58 16 18 H -0.28 -6.49 7.11 56.52 0.40 -6.09 16 19 H -0.26 -5.77 6.54 56.52 0.37 -5.40 16 20 C 0.12 2.10 5.22 -4.04 -0.02 2.08 16 21 C -0.13 -1.93 5.01 -26.73 -0.13 -2.06 16 22 C -0.09 -1.17 2.92 -90.62 -0.26 -1.44 16 23 C -0.15 -1.79 8.95 37.16 0.33 -1.46 16 24 C -0.14 -1.56 9.19 37.16 0.34 -1.22 16 25 C -0.07 -1.20 9.37 -39.18 -0.37 -1.57 16 26 H 0.07 0.64 8.14 -51.93 -0.42 0.21 16 27 H 0.07 0.57 8.08 -51.93 -0.42 0.16 16 28 H 0.07 0.61 8.08 -51.93 -0.42 0.19 16 29 H 0.13 1.58 8.06 -52.49 -0.42 1.16 16 30 H 0.19 4.24 4.76 -52.49 -0.25 3.99 16 31 H 0.03 0.72 7.17 -51.93 -0.37 0.34 16 32 H 0.04 0.78 4.83 -51.93 -0.25 0.53 16 33 H 0.27 7.11 8.31 -40.82 -0.34 6.77 16 34 H 0.08 1.48 8.07 -51.93 -0.42 1.06 16 35 H 0.08 1.44 5.78 -51.93 -0.30 1.14 16 36 H 0.06 0.97 8.14 -51.93 -0.42 0.55 16 37 H 0.06 0.95 8.14 -51.93 -0.42 0.53 16 38 H 0.07 0.88 8.14 -51.93 -0.42 0.46 16 39 H 0.05 0.66 8.14 -51.93 -0.42 0.24 16 40 H 0.05 0.52 8.14 -51.93 -0.42 0.10 16 41 H 0.06 0.78 6.57 -51.93 -0.34 0.44 16 42 H 0.05 0.57 8.14 -51.93 -0.42 0.14 16 43 H 0.05 0.50 8.14 -51.93 -0.42 0.08 16 44 H 0.05 0.56 8.14 -51.94 -0.42 0.14 16 45 H 0.13 1.90 8.06 -52.49 -0.42 1.47 16 LS Contribution 377.67 15.07 5.69 5.69 Total: -1.00 -28.22 377.67 -9.32 -37.54 By element: Atomic # 1 Polarization: 11.56 SS G_CDS: -7.01 Total: 4.55 kcal Atomic # 6 Polarization: -9.27 SS G_CDS: -2.26 Total: -11.52 kcal Atomic # 7 Polarization: -36.43 SS G_CDS: 0.34 Total: -36.09 kcal Atomic # 8 Polarization: -12.49 SS G_CDS: 0.09 Total: -12.41 kcal Atomic # 14 Polarization: 19.60 SS G_CDS: -4.67 Total: 14.94 kcal Atomic # 17 Polarization: -1.20 SS G_CDS: -1.50 Total: -2.70 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -28.22 -9.32 -37.54 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000152416383.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.899 kcal (2) G-P(sol) polarization free energy of solvation -28.224 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.123 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.320 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.544 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.442 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds