Wall clock time and date at job start Tue Mar 31 2020 13:47:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17407 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 N 1.46497 * 109.47061 * 47.77815 * 3 2 1 5 5 C 1.36935 * 120.00190 * 263.74492 * 4 3 2 6 6 H 1.07997 * 120.00349 * 210.76827 * 5 4 3 7 7 C 1.38817 * 120.00064 * 30.76768 * 5 4 3 8 8 N 1.31625 * 119.99623 * 353.71401 * 7 5 4 9 9 Si 1.86793 * 120.00292 * 173.71186 * 7 5 4 10 10 H 1.48504 * 109.46798 * 60.00412 * 9 7 5 11 11 H 1.48496 * 109.47285 * 179.97438 * 9 7 5 12 12 H 1.48494 * 109.47205 * 300.00380 * 9 7 5 13 13 C 1.46503 * 120.00061 * 83.74960 * 4 3 2 14 14 C 1.53002 * 109.46957 * 269.99931 * 13 4 3 15 15 C 1.50705 * 109.46765 * 179.97438 * 14 13 4 16 16 O 1.21286 * 120.00010 * 359.97438 * 15 14 13 17 17 N 1.34774 * 119.99278 * 180.27815 * 15 14 13 18 18 C 1.40100 * 119.99740 * 174.88883 * 17 15 14 19 19 C 1.38799 * 120.06558 * 33.92463 * 18 17 15 20 20 C 1.38136 * 119.96684 * 179.75165 * 19 18 17 21 21 C 1.38385 * 120.10000 * 0.53418 * 20 19 18 22 22 Cl 1.73601 * 119.93720 * 179.76774 * 21 20 19 23 23 C 1.38363 * 120.12662 * 359.74146 * 21 20 19 24 24 C 1.38307 * 120.03416 * 359.97438 * 23 21 20 25 25 F 1.35098 * 120.05027 * 179.97438 * 24 23 21 26 26 H 4.40637 * 5.51361 * 179.97438 * 4 1 2 27 27 H 1.09006 * 109.47222 * 287.77561 * 3 2 1 28 28 H 1.09003 * 109.46997 * 167.78235 * 3 2 1 29 29 H 0.96994 * 119.99963 * 179.97438 * 8 7 5 30 30 H 1.08994 * 109.47430 * 149.99549 * 13 4 3 31 31 H 1.09002 * 109.46671 * 29.99654 * 13 4 3 32 32 H 1.09001 * 109.47105 * 59.99851 * 14 13 4 33 33 H 1.08995 * 109.46823 * 299.99974 * 14 13 4 34 34 H 0.96999 * 120.00585 * 354.87936 * 17 15 14 35 35 H 1.07998 * 120.01606 * 0.02810 * 19 18 17 36 36 H 1.08004 * 119.95204 * 180.28000 * 20 19 18 37 37 H 1.08008 * 119.98226 * 179.97438 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1741 0.0000 0.0000 3 6 2.6461 0.0007 0.0000 4 7 3.1348 -0.9273 -1.0228 5 6 3.4854 -2.2050 -0.6769 6 1 4.2628 -2.7184 -1.2232 7 6 2.8416 -2.8404 0.3762 8 7 1.9834 -2.1754 1.1203 9 14 3.1933 -4.6391 0.7371 10 1 4.6363 -4.8095 1.0436 11 1 2.3850 -5.0771 1.9033 12 1 2.8386 -5.4603 -0.4482 13 6 3.2485 -0.4883 -2.4159 14 6 1.9364 -0.7736 -3.1493 15 6 2.0532 -0.3215 -4.5821 16 8 3.0843 0.1801 -4.9776 17 7 1.0098 -0.4689 -5.4223 18 6 1.0794 0.0474 -6.7229 19 6 2.2900 0.0612 -7.4017 20 6 2.3552 0.5659 -8.6859 21 6 1.2175 1.0682 -9.2928 22 17 1.3056 1.7071 -10.9046 23 6 0.0098 1.0616 -8.6177 24 6 -0.0629 0.5522 -7.3340 25 9 -1.2419 0.5461 -6.6743 26 1 -1.0498 -0.0003 -0.0001 27 1 3.0096 -0.3129 0.9786 28 1 3.0089 1.0052 -0.2175 29 1 1.5333 -2.6194 1.8558 30 1 4.0612 -1.0282 -2.9018 31 1 3.4552 0.5816 -2.4439 32 1 1.1237 -0.2337 -2.6633 33 1 1.7297 -1.8434 -3.1211 34 1 0.2107 -0.9325 -5.1267 35 1 3.1795 -0.3266 -6.9278 36 1 3.2965 0.5724 -9.2155 37 1 -0.8767 1.4546 -9.0935 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000281334164.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:47:21 Heat of formation + Delta-G solvation = 21.551633 kcal Electronic energy + Delta-G solvation = -23978.285658 eV Core-core repulsion = 20084.689717 eV Total energy + Delta-G solvation = -3893.595942 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 324.078 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -49.19159 -40.52778 -38.73204 -36.80874 -36.18280 -34.75232 -32.19635 -31.58465 -31.05704 -30.21940 -28.86980 -26.08175 -24.70167 -23.54743 -22.68346 -21.08975 -20.07244 -18.44451 -17.52240 -17.46129 -17.22868 -16.62174 -16.23644 -15.79472 -15.56439 -15.23001 -14.91457 -14.37516 -13.97396 -13.86680 -13.60839 -13.46803 -13.24652 -12.91056 -12.66830 -12.35811 -12.12105 -11.71672 -11.50770 -11.35159 -11.31515 -11.10248 -10.92653 -10.43531 -10.38616 -10.33675 -10.04676 -9.72579 -9.22586 -9.12862 -8.78520 -8.35394 -8.32304 -6.94199 -5.88561 -3.42314 0.63993 0.80392 1.74203 2.61906 2.90150 3.23708 3.31981 3.38137 3.38510 3.87042 4.12385 4.33550 4.38373 4.46957 4.63102 4.77969 4.95492 5.21181 5.29922 5.32807 5.64576 5.68182 5.75378 5.77114 5.79662 5.88956 5.98632 6.08944 6.32011 6.57083 6.61453 6.70311 6.87958 7.24229 7.29679 7.44947 7.69840 8.12350 8.31360 9.06814 9.14257 9.67491 10.19069 11.14446 Molecular weight = 324.08amu Principal moments of inertia in cm(-1) A = 0.021919 B = 0.002612 C = 0.002516 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1277.128568 B =10715.674662 C =11126.988717 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.316 4.316 2 C -0.083 4.083 3 C 0.264 3.736 4 N -0.586 5.586 5 C -0.271 4.271 6 H 0.072 0.928 7 C 0.014 3.986 8 N -0.891 5.891 9 Si 0.903 3.097 10 H -0.282 1.282 11 H -0.290 1.290 12 H -0.283 1.283 13 C 0.167 3.833 14 C -0.159 4.159 15 C 0.522 3.478 16 O -0.522 6.522 17 N -0.679 5.679 18 C 0.133 3.867 19 C -0.087 4.087 20 C -0.098 4.098 21 C -0.032 4.032 22 Cl -0.064 7.064 23 C -0.128 4.128 24 C 0.078 3.922 25 F -0.130 7.130 26 H 0.188 0.812 27 H 0.106 0.894 28 H 0.031 0.969 29 H 0.257 0.743 30 H 0.057 0.943 31 H 0.047 0.953 32 H 0.094 0.906 33 H 0.098 0.902 34 H 0.416 0.584 35 H 0.163 0.837 36 H 0.143 0.857 37 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.669 5.734 -18.364 19.585 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.336 4.336 2 C -0.086 4.086 3 C 0.139 3.861 4 N -0.306 5.306 5 C -0.400 4.400 6 H 0.090 0.910 7 C -0.185 4.185 8 N -0.533 5.533 9 Si 0.732 3.268 10 H -0.208 1.208 11 H -0.216 1.216 12 H -0.209 1.209 13 C 0.039 3.961 14 C -0.202 4.202 15 C 0.312 3.688 16 O -0.397 6.397 17 N -0.325 5.325 18 C 0.036 3.964 19 C -0.108 4.108 20 C -0.117 4.117 21 C -0.060 4.060 22 Cl -0.035 7.035 23 C -0.148 4.148 24 C 0.056 3.944 25 F -0.109 7.109 26 H 0.206 0.794 27 H 0.123 0.877 28 H 0.049 0.951 29 H 0.068 0.932 30 H 0.075 0.925 31 H 0.066 0.934 32 H 0.112 0.888 33 H 0.116 0.884 34 H 0.253 0.747 35 H 0.180 0.820 36 H 0.161 0.839 37 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -2.969 6.064 -18.454 19.650 hybrid contribution -1.263 -1.351 0.337 1.880 sum -4.232 4.713 -18.116 19.192 Atomic orbital electron populations 1.24155 0.95321 1.08031 1.06054 1.24355 0.95287 0.93716 0.95236 1.17916 0.82690 0.90052 0.95449 1.44020 1.74759 1.11096 1.00684 1.19148 1.15059 0.89919 1.15911 0.91005 1.25294 0.96442 0.97867 0.98943 1.69926 1.29266 1.34827 1.19287 0.86374 0.77686 0.85282 0.77431 1.20805 1.21631 1.20915 1.20706 0.92516 0.98018 0.84825 1.22667 1.05578 1.03814 0.88104 1.21787 0.81928 0.76607 0.88494 1.90632 1.28497 1.42708 1.77879 1.43916 1.21011 1.57321 1.10217 1.17983 0.93588 0.98447 0.86390 1.21320 0.97838 0.98974 0.92652 1.21068 0.97791 0.98172 0.94697 1.20545 0.94618 1.02920 0.87871 1.98377 1.98592 1.85219 1.21283 1.20752 0.98495 1.02406 0.93128 1.17242 0.81335 1.03771 0.92049 1.91519 1.44390 1.94592 1.80355 0.79432 0.87655 0.95072 0.93187 0.92499 0.93431 0.88825 0.88376 0.74733 0.81979 0.83901 0.83465 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.32 -6.83 19.25 29.55 0.57 -6.26 16 2 C -0.08 -1.91 10.35 -37.12 -0.38 -2.30 16 3 C 0.26 6.05 5.44 -6.83 -0.04 6.01 16 4 N -0.59 -13.65 2.50 -176.57 -0.44 -14.09 16 5 C -0.27 -6.90 9.59 -15.06 -0.14 -7.05 16 6 H 0.07 1.80 7.84 -52.49 -0.41 1.39 16 7 C 0.01 0.37 5.36 -17.43 -0.09 0.28 16 8 N -0.89 -23.98 8.87 55.49 0.49 -23.49 16 9 Si 0.90 20.67 29.56 -169.99 -5.02 15.65 16 10 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 11 H -0.29 -6.79 7.11 56.52 0.40 -6.39 16 12 H -0.28 -6.46 7.11 56.52 0.40 -6.05 16 13 C 0.17 3.31 4.98 -4.04 -0.02 3.29 16 14 C -0.16 -2.75 5.88 -27.88 -0.16 -2.91 16 15 C 0.52 8.10 7.68 -10.98 -0.08 8.02 16 16 O -0.52 -9.12 13.35 5.55 0.07 -9.05 16 17 N -0.68 -8.75 5.23 -9.80 -0.05 -8.80 16 18 C 0.13 1.65 6.33 -83.57 -0.53 1.12 16 19 C -0.09 -1.04 8.71 -39.41 -0.34 -1.38 16 20 C -0.10 -0.97 9.82 -39.56 -0.39 -1.36 16 21 C -0.03 -0.31 6.32 -39.48 -0.25 -0.56 16 22 Cl -0.06 -0.55 28.95 -51.86 -1.50 -2.06 16 23 C -0.13 -1.26 9.80 -39.51 -0.39 -1.65 16 24 C 0.08 0.89 7.31 -39.26 -0.29 0.61 16 25 F -0.13 -1.54 16.95 2.25 0.04 -1.50 16 26 H 0.19 3.41 7.80 -54.10 -0.42 2.99 16 27 H 0.11 2.65 6.54 -51.93 -0.34 2.31 16 28 H 0.03 0.64 7.98 -51.93 -0.41 0.23 16 29 H 0.26 6.90 8.31 -40.82 -0.34 6.56 16 30 H 0.06 1.14 8.00 -51.93 -0.42 0.72 16 31 H 0.05 0.91 7.91 -51.93 -0.41 0.50 16 32 H 0.09 1.68 7.18 -51.93 -0.37 1.31 16 33 H 0.10 1.75 8.14 -51.93 -0.42 1.33 16 34 H 0.42 4.57 8.65 -40.82 -0.35 4.21 16 35 H 0.16 2.10 6.13 -52.49 -0.32 1.78 16 36 H 0.14 1.13 8.06 -52.48 -0.42 0.71 16 37 H 0.15 1.18 8.06 -52.48 -0.42 0.75 16 LS Contribution 344.14 15.07 5.19 5.19 Total: -1.00 -28.29 344.14 -7.64 -35.93 By element: Atomic # 1 Polarization: 10.23 SS G_CDS: -3.86 Total: 6.36 kcal Atomic # 6 Polarization: -1.60 SS G_CDS: -2.54 Total: -4.14 kcal Atomic # 7 Polarization: -46.38 SS G_CDS: 0.00 Total: -46.38 kcal Atomic # 8 Polarization: -9.12 SS G_CDS: 0.07 Total: -9.05 kcal Atomic # 9 Polarization: -1.54 SS G_CDS: 0.04 Total: -1.50 kcal Atomic # 14 Polarization: 20.67 SS G_CDS: -5.02 Total: 15.65 kcal Atomic # 17 Polarization: -0.55 SS G_CDS: -1.50 Total: -2.06 kcal Total LS contribution 5.19 Total: 5.19 kcal Total: -28.29 -7.64 -35.93 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000281334164.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.478 kcal (2) G-P(sol) polarization free energy of solvation -28.291 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.187 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.635 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.926 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.552 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds