Wall clock time and date at job start Tue Mar 31 2020 14:18:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 N 1.46497 * 109.47351 * 36.40185 * 3 2 1 5 5 C 1.36713 * 120.00051 * 270.61763 * 4 3 2 6 6 H 1.07998 * 120.00113 * 145.33502 * 5 4 3 7 7 C 1.39132 * 120.00026 * 325.33739 * 5 4 3 8 8 N 1.31323 * 119.99842 * 153.72876 * 7 5 4 9 9 Si 1.86797 * 119.99984 * 333.72827 * 7 5 4 10 10 H 1.48500 * 109.46981 * 94.99486 * 9 7 5 11 11 H 1.48495 * 109.47432 * 214.99669 * 9 7 5 12 12 H 1.48505 * 109.47150 * 334.99979 * 9 7 5 13 13 C 1.34774 * 119.99922 * 90.61978 * 4 3 2 14 14 O 1.21765 * 120.00076 * 180.02562 * 13 4 3 15 15 C 1.46232 * 120.00140 * 359.97438 * 13 4 3 16 16 C 1.34980 * 119.99695 * 180.02562 * 15 13 4 17 17 C 1.47145 * 119.99656 * 180.27629 * 16 15 13 18 18 C 1.39884 * 120.17064 * 359.44743 * 17 16 15 19 19 C 1.37877 * 119.81732 * 179.78981 * 18 17 16 20 20 C 1.38411 * 120.17701 * 0.48566 * 19 18 17 21 21 C 1.50702 * 119.82670 * 179.76346 * 20 19 18 22 22 F 1.39898 * 109.47092 * 269.98529 * 21 20 19 23 23 F 1.39903 * 109.46808 * 29.98130 * 21 20 19 24 24 F 1.39897 * 109.47351 * 149.98217 * 21 20 19 25 25 C 1.38413 * 120.35324 * 359.74758 * 20 19 18 26 26 C 1.37881 * 120.17296 * 0.02562 * 25 20 19 27 27 H 1.09003 * 109.47302 * 276.39901 * 3 2 1 28 28 H 1.09005 * 109.47036 * 156.40233 * 3 2 1 29 29 H 0.96994 * 119.99608 * 179.97438 * 8 7 5 30 30 H 1.07999 * 119.99686 * 0.02562 * 15 13 4 31 31 H 1.08000 * 120.00548 * 359.97438 * 16 15 13 32 32 H 1.08000 * 120.08934 * 0.02589 * 18 17 16 33 33 H 1.08007 * 119.90970 * 180.23337 * 19 18 17 34 34 H 1.07998 * 119.91226 * 179.97438 * 25 20 19 35 35 H 1.07994 * 120.08677 * 179.97438 * 26 25 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0969 -1.1108 -0.8196 5 6 3.3133 -2.3354 -0.2517 6 1 3.1235 -3.2348 -0.8188 7 6 3.7781 -2.4231 1.0567 8 7 3.5127 -3.4881 1.7778 9 14 4.7796 -1.0260 1.7878 10 1 3.8817 -0.1158 2.5431 11 1 5.8074 -1.5807 2.7048 12 1 5.4458 -0.2707 0.6964 13 6 3.3334 -0.9260 -2.1335 14 8 3.7393 -1.8499 -2.8149 15 6 3.1014 0.3837 -2.7411 16 6 3.3378 0.5685 -4.0572 17 6 3.1102 1.8881 -4.6673 18 6 2.6379 2.9503 -3.8892 19 6 2.4314 4.1848 -4.4674 20 6 2.6804 4.3719 -5.8160 21 6 2.4468 5.7231 -6.4410 22 9 1.1316 5.7981 -6.9119 23 9 2.6572 6.7220 -5.4844 24 9 3.3347 5.9038 -7.5069 25 6 3.1432 3.3246 -6.5937 26 6 3.3592 2.0852 -6.0295 27 1 2.9715 -0.1137 1.0213 28 1 2.9709 0.9426 -0.4114 29 1 3.8370 -3.5494 2.6898 30 1 2.7410 1.2031 -2.1368 31 1 3.6986 -0.2507 -4.6614 32 1 2.4393 2.8048 -2.8376 33 1 2.0704 5.0070 -3.8673 34 1 3.3347 3.4783 -7.6454 35 1 3.7199 1.2689 -6.6376 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491364203.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:18:53 Heat of formation + Delta-G solvation = -92.453942 kcal Electronic energy + Delta-G solvation = -25658.395699 eV Core-core repulsion = 21208.059424 eV Total energy + Delta-G solvation = -4450.336275 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 324.083 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -50.41136 -47.93251 -47.87067 -39.77091 -39.09705 -36.39801 -34.97556 -34.23779 -32.43552 -31.50859 -30.53943 -27.95949 -26.82247 -25.22068 -23.41026 -22.79180 -20.90284 -18.94440 -18.80042 -18.72620 -18.68381 -18.27260 -17.22242 -16.72480 -15.86223 -15.50861 -15.27129 -14.94139 -14.72768 -14.63436 -14.34437 -14.17451 -14.10686 -14.03603 -13.97427 -13.75277 -13.57525 -13.33146 -13.08430 -12.95213 -12.61650 -12.47507 -12.26698 -11.95028 -11.70078 -11.55078 -11.18661 -11.06936 -10.60270 -10.51646 -10.15512 -9.43046 -9.38281 -8.90086 -8.48639 -8.22939 -6.72006 -4.20426 0.20140 1.01174 1.85932 2.40708 2.78251 2.94530 3.01124 3.05938 3.17065 3.34289 3.46322 3.76277 3.86625 3.89859 4.12869 4.17570 4.36075 4.48365 4.52928 4.66346 4.87358 4.94496 5.03647 5.10145 5.25354 5.38915 5.49759 5.59624 5.63364 5.86747 5.89414 5.96692 6.40487 6.46276 6.57389 7.19489 7.87460 7.96906 8.16402 8.64644 8.95733 9.40344 10.38598 Molecular weight = 324.08amu Principal moments of inertia in cm(-1) A = 0.021720 B = 0.002693 C = 0.002616 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1288.823252 B =10393.479921 C =10702.215193 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.434 5.434 2 C 0.205 3.795 3 C 0.175 3.825 4 N -0.444 5.444 5 C -0.323 4.323 6 H 0.115 0.885 7 C 0.064 3.936 8 N -0.835 5.835 9 Si 0.858 3.142 10 H -0.267 1.267 11 H -0.277 1.277 12 H -0.252 1.252 13 C 0.486 3.514 14 O -0.553 6.553 15 C -0.161 4.161 16 C -0.080 4.080 17 C -0.014 4.014 18 C -0.118 4.118 19 C -0.067 4.067 20 C -0.194 4.194 21 C 0.509 3.491 22 F -0.178 7.178 23 F -0.178 7.178 24 F -0.179 7.179 25 C -0.069 4.069 26 C -0.109 4.109 27 H 0.113 0.887 28 H 0.113 0.887 29 H 0.280 0.720 30 H 0.121 0.879 31 H 0.140 0.860 32 H 0.138 0.862 33 H 0.136 0.864 34 H 0.136 0.864 35 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.311 18.310 -11.412 21.616 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.113 5.113 2 C -0.114 4.114 3 C 0.049 3.951 4 N -0.165 5.165 5 C -0.449 4.449 6 H 0.132 0.868 7 C -0.146 4.146 8 N -0.468 5.468 9 Si 0.684 3.316 10 H -0.194 1.194 11 H -0.202 1.202 12 H -0.176 1.176 13 C 0.278 3.722 14 O -0.435 6.435 15 C -0.182 4.182 16 C -0.100 4.100 17 C -0.014 4.014 18 C -0.136 4.136 19 C -0.085 4.085 20 C -0.195 4.195 21 C 0.455 3.545 22 F -0.159 7.159 23 F -0.160 7.160 24 F -0.160 7.160 25 C -0.087 4.087 26 C -0.127 4.127 27 H 0.130 0.870 28 H 0.131 0.869 29 H 0.091 0.909 30 H 0.139 0.861 31 H 0.158 0.842 32 H 0.156 0.844 33 H 0.154 0.846 34 H 0.154 0.846 35 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -0.146 17.701 -11.553 21.138 hybrid contribution 0.849 0.880 0.645 1.382 sum 0.702 18.581 -10.908 21.558 Atomic orbital electron populations 1.81069 1.13094 1.08464 1.08660 1.29858 0.95641 0.92869 0.93074 1.19629 0.81432 0.93771 1.00318 1.43530 1.55681 1.10086 1.07155 1.19118 1.44621 0.83636 0.97565 0.86798 1.25421 0.96084 0.97261 0.95828 1.69757 1.38627 1.29487 1.08978 0.87235 0.81629 0.82619 0.80146 1.19422 1.20237 1.17591 1.18013 0.83033 0.88259 0.82908 1.90723 1.48672 1.43401 1.60721 1.23434 1.00678 0.98028 0.96063 1.22191 0.98175 0.94493 0.95152 1.19391 0.95047 0.93478 0.93487 1.21442 0.99623 0.91799 1.00686 1.20841 0.96728 0.98085 0.92822 1.20006 1.10571 0.92748 0.96182 1.18336 0.74084 0.85920 0.76159 1.93228 1.36878 1.96810 1.89017 1.93188 1.94626 1.64198 1.63953 1.93183 1.68737 1.96038 1.58042 1.20845 0.95993 0.91888 0.99966 1.21362 1.00077 0.97022 0.94225 0.87000 0.86885 0.90894 0.86144 0.84181 0.84384 0.84611 0.84638 0.84214 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -8.60 18.54 42.15 0.78 -7.82 16 2 C 0.20 3.74 15.76 -20.76 -0.33 3.41 16 3 C 0.18 2.99 4.49 -6.83 -0.03 2.96 16 4 N -0.44 -9.54 2.17 -119.59 -0.26 -9.80 16 5 C -0.32 -8.27 9.37 -15.04 -0.14 -8.41 16 6 H 0.11 3.34 7.85 -52.49 -0.41 2.93 16 7 C 0.06 1.57 5.25 -17.44 -0.09 1.48 16 8 N -0.84 -22.02 13.95 55.51 0.77 -21.25 16 9 Si 0.86 17.24 25.22 -169.99 -4.29 12.95 16 10 H -0.27 -4.82 6.60 56.52 0.37 -4.44 16 11 H -0.28 -5.68 7.11 56.52 0.40 -5.27 16 12 H -0.25 -4.85 7.11 56.52 0.40 -4.45 16 13 C 0.49 10.12 7.55 -13.05 -0.10 10.02 16 14 O -0.55 -13.64 16.06 5.13 0.08 -13.55 16 15 C -0.16 -2.46 8.61 -37.53 -0.32 -2.78 16 16 C -0.08 -1.08 9.46 -37.13 -0.35 -1.43 16 17 C -0.01 -0.16 5.87 -105.05 -0.62 -0.77 16 18 C -0.12 -1.19 9.41 -39.10 -0.37 -1.56 16 19 C -0.07 -0.63 9.38 -39.65 -0.37 -1.00 16 20 C -0.19 -1.88 5.46 -104.49 -0.57 -2.45 16 21 C 0.51 4.92 3.36 36.01 0.12 5.04 16 22 F -0.18 -1.84 17.30 2.25 0.04 -1.80 16 23 F -0.18 -1.76 16.45 2.25 0.04 -1.72 16 24 F -0.18 -1.73 16.45 2.25 0.04 -1.70 16 25 C -0.07 -0.63 9.38 -39.65 -0.37 -1.00 16 26 C -0.11 -1.05 9.80 -39.10 -0.38 -1.43 16 27 H 0.11 1.96 3.15 -51.93 -0.16 1.79 16 28 H 0.11 1.36 6.06 -51.93 -0.31 1.04 16 29 H 0.28 6.76 8.31 -40.82 -0.34 6.42 16 30 H 0.12 1.44 4.21 -52.49 -0.22 1.22 16 31 H 0.14 1.99 7.52 -52.49 -0.39 1.60 16 32 H 0.14 1.20 6.17 -52.49 -0.32 0.87 16 33 H 0.14 1.05 7.59 -52.48 -0.40 0.65 16 34 H 0.14 0.97 7.59 -52.49 -0.40 0.57 16 35 H 0.14 1.09 8.06 -52.49 -0.42 0.67 16 LS Contribution 326.59 15.07 4.92 4.92 Total: -1.00 -30.09 326.59 -4.01 -34.10 By element: Atomic # 1 Polarization: 5.81 SS G_CDS: -2.21 Total: 3.60 kcal Atomic # 6 Polarization: 6.00 SS G_CDS: -3.92 Total: 2.07 kcal Atomic # 7 Polarization: -40.17 SS G_CDS: 1.30 Total: -38.87 kcal Atomic # 8 Polarization: -13.64 SS G_CDS: 0.08 Total: -13.55 kcal Atomic # 9 Polarization: -5.33 SS G_CDS: 0.11 Total: -5.22 kcal Atomic # 14 Polarization: 17.24 SS G_CDS: -4.29 Total: 12.95 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -30.09 -4.01 -34.10 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491364203.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.355 kcal (2) G-P(sol) polarization free energy of solvation -30.090 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.445 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.009 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.099 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.454 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds