Wall clock time and date at job start Tue Mar 31 2020 14:43:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 N 1.46500 * 109.47043 * 2 1 4 4 C 1.46504 * 119.99783 * 274.81813 * 3 2 1 5 5 C 1.50701 * 109.46973 * 263.66529 * 4 3 2 6 6 H 1.07996 * 120.00347 * 0.02562 * 5 4 3 7 7 C 1.37883 * 119.99814 * 179.97438 * 5 4 3 8 8 N 1.31507 * 120.00219 * 180.02562 * 7 5 4 9 9 Si 1.86805 * 119.99891 * 0.02562 * 7 5 4 10 10 H 1.48496 * 109.47300 * 89.99736 * 9 7 5 11 11 H 1.48497 * 109.46900 * 209.99636 * 9 7 5 12 12 H 1.48506 * 109.46980 * 329.99545 * 9 7 5 13 13 C 1.34781 * 120.00294 * 94.81976 * 3 2 1 14 14 O 1.21355 * 119.99593 * 354.62487 * 13 3 2 15 15 C 1.49350 * 120.00068 * 174.62181 * 13 3 2 16 16 O 1.21377 * 120.00232 * 0.24691 * 15 13 3 17 17 N 1.34774 * 119.99954 * 180.24015 * 15 13 3 18 18 C 1.39724 * 120.00183 * 184.85447 * 17 15 13 19 19 C 1.38928 * 120.06657 * 326.22417 * 18 17 15 20 20 C 1.38192 * 119.91253 * 180.02562 * 19 18 17 21 21 Cl 1.73598 * 119.97633 * 180.02562 * 20 19 18 22 22 C 1.38435 * 120.04768 * 359.97438 * 20 19 18 23 23 C 1.38252 * 120.13720 * 0.27166 * 22 20 19 24 24 C 1.38125 * 120.09187 * 359.49430 * 23 22 20 25 25 C 1.50691 * 120.02773 * 180.22774 * 24 23 22 26 26 H 1.08998 * 109.47171 * 299.99673 * 1 2 3 27 27 H 1.09000 * 109.47042 * 60.00532 * 1 2 3 28 28 H 1.09004 * 109.47043 * 179.97438 * 1 2 3 29 29 H 1.08997 * 109.47694 * 239.99770 * 2 1 3 30 30 H 1.09004 * 109.47516 * 119.99541 * 2 1 3 31 31 H 1.08991 * 109.47166 * 23.66896 * 4 3 2 32 32 H 1.09005 * 109.46815 * 143.67007 * 4 3 2 33 33 H 0.96999 * 120.00514 * 180.02562 * 8 7 5 34 34 H 0.97003 * 120.00019 * 4.85186 * 17 15 13 35 35 H 1.08006 * 120.04423 * 0.05015 * 19 18 17 36 36 H 1.08002 * 119.92773 * 180.02562 * 22 20 19 37 37 H 1.08000 * 119.94922 * 179.74720 * 23 22 20 38 38 H 1.09001 * 109.47621 * 270.25702 * 25 24 23 39 39 H 1.09001 * 109.47346 * 30.25921 * 25 24 23 40 40 H 1.09003 * 109.47414 * 150.25655 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.1620 2.1073 -1.2643 5 6 3.5894 2.0131 -1.7383 6 1 4.3167 1.4666 -1.1563 7 6 3.9666 2.6236 -2.9156 8 7 5.2121 2.5410 -3.3296 9 14 2.7084 3.5682 -3.9227 10 1 2.6870 4.9867 -3.4837 11 1 3.0735 3.5005 -5.3605 12 1 1.3644 2.9684 -3.7244 13 6 2.3354 1.9840 1.1631 14 8 2.1250 1.4190 2.2163 15 6 2.9457 3.3471 1.1557 16 8 3.1520 3.9140 0.1024 17 7 3.2672 3.9477 2.3185 18 6 3.7434 5.2614 2.3180 19 6 4.5281 5.7169 1.2660 20 6 4.9977 7.0166 1.2690 21 17 5.9778 7.5877 -0.0450 22 6 4.6863 7.8637 2.3187 23 6 3.9098 7.4109 3.3691 24 6 3.4333 6.1145 3.3696 25 6 2.5828 5.6241 4.5128 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5137 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 1.8934 -0.5138 -0.8899 30 1 1.8934 -0.5138 0.8900 31 1 1.5011 1.6691 -2.0121 32 1 1.8974 3.1541 -1.1142 33 1 5.4775 2.9708 -4.1576 34 1 3.1681 3.4681 3.1558 35 1 4.7704 5.0563 0.4466 36 1 5.0540 8.8792 2.3189 37 1 3.6721 8.0732 4.1885 38 1 3.2230 5.1996 5.2861 39 1 2.0159 6.4576 4.9276 40 1 1.8940 4.8603 4.1517 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000123842328.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:43:52 Heat of formation + Delta-G solvation = -33.635234 kcal Electronic energy + Delta-G solvation = -25645.126068 eV Core-core repulsion = 21872.597350 eV Total energy + Delta-G solvation = -3772.528719 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 324.103 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -40.80896 -39.39766 -37.82573 -36.43138 -35.84515 -34.35025 -32.60841 -32.41010 -30.74339 -29.91064 -27.74868 -26.86207 -25.06330 -23.17029 -22.66943 -21.70255 -20.94519 -19.32552 -17.75393 -17.11730 -16.93532 -16.32774 -15.73623 -15.60538 -15.22367 -14.79614 -14.41130 -14.17577 -13.90226 -13.77241 -13.57856 -13.26273 -13.17325 -12.82670 -12.68529 -12.49434 -12.21570 -12.04793 -11.80189 -11.59269 -11.49363 -11.20429 -11.05215 -10.83536 -10.70875 -10.66627 -10.45649 -10.22095 -10.13104 -9.54219 -8.83364 -8.59692 -8.48114 -8.09549 -7.93926 -6.07264 -4.04866 1.08606 1.30331 2.01541 2.28151 2.75967 3.31073 3.35512 3.39966 3.54705 3.82653 3.94686 4.41975 4.71761 4.82234 4.84651 5.05894 5.23606 5.26673 5.37999 5.40878 5.47734 5.56004 5.60160 5.67640 5.83541 5.89396 6.05346 6.15067 6.15821 6.33149 6.35976 6.41847 6.43039 6.45950 6.83210 6.98021 7.08765 7.38116 7.55223 7.83058 8.14746 8.42751 8.54817 8.92344 9.52981 11.05846 Molecular weight = 324.10amu Principal moments of inertia in cm(-1) A = 0.010238 B = 0.005698 C = 0.003921 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2734.358408 B = 4912.536642 C = 7139.976949 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.164 4.164 2 C 0.110 3.890 3 N -0.553 5.553 4 C 0.198 3.802 5 C -0.516 4.516 6 H 0.072 0.928 7 C 0.082 3.918 8 N -0.895 5.895 9 Si 0.871 3.129 10 H -0.271 1.271 11 H -0.287 1.287 12 H -0.268 1.268 13 C 0.511 3.489 14 O -0.555 6.555 15 C 0.491 3.509 16 O -0.433 6.433 17 N -0.657 5.657 18 C 0.167 3.833 19 C -0.111 4.111 20 C -0.019 4.019 21 Cl -0.066 7.066 22 C -0.129 4.129 23 C -0.094 4.094 24 C -0.113 4.113 25 C -0.115 4.115 26 H 0.055 0.945 27 H 0.057 0.943 28 H 0.063 0.937 29 H 0.085 0.915 30 H 0.080 0.920 31 H 0.031 0.969 32 H 0.056 0.944 33 H 0.264 0.736 34 H 0.418 0.582 35 H 0.162 0.838 36 H 0.131 0.869 37 H 0.132 0.868 38 H 0.072 0.928 39 H 0.071 0.929 40 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.363 6.596 13.272 15.761 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.223 4.223 2 C -0.012 4.012 3 N -0.283 5.283 4 C 0.078 3.922 5 C -0.555 4.555 6 H 0.090 0.910 7 C -0.121 4.121 8 N -0.533 5.533 9 Si 0.699 3.301 10 H -0.197 1.197 11 H -0.213 1.213 12 H -0.193 1.193 13 C 0.294 3.706 14 O -0.436 6.436 15 C 0.273 3.727 16 O -0.301 6.301 17 N -0.306 5.306 18 C 0.071 3.929 19 C -0.132 4.132 20 C -0.046 4.046 21 Cl -0.037 7.037 22 C -0.149 4.149 23 C -0.112 4.112 24 C -0.116 4.116 25 C -0.172 4.172 26 H 0.074 0.926 27 H 0.076 0.924 28 H 0.082 0.918 29 H 0.104 0.896 30 H 0.098 0.902 31 H 0.049 0.951 32 H 0.073 0.927 33 H 0.074 0.926 34 H 0.256 0.744 35 H 0.180 0.820 36 H 0.149 0.851 37 H 0.150 0.850 38 H 0.091 0.909 39 H 0.090 0.910 40 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -5.170 6.719 12.661 15.237 hybrid contribution -0.348 0.399 -0.536 0.754 sum -5.518 7.119 12.125 15.104 Atomic orbital electron populations 1.22117 0.96166 1.01805 1.02184 1.21481 0.93894 0.82360 1.03508 1.47953 1.59267 1.13564 1.07518 1.20319 0.98900 0.93100 0.79881 1.21053 0.92924 1.34178 1.07316 0.90982 1.24707 0.94962 0.95291 0.97107 1.69875 1.16456 1.44227 1.22749 0.86930 0.82096 0.81611 0.79507 1.19688 1.21306 1.19267 1.19660 0.80096 0.86364 0.84513 1.90660 1.55792 1.66349 1.30815 1.20434 0.80609 0.87890 0.83817 1.90932 1.46570 1.63544 1.29034 1.43182 1.64567 1.12189 1.10672 1.17381 0.95361 0.84575 0.95559 1.21460 0.95924 0.95463 1.00340 1.20733 0.98211 0.94485 0.91217 1.98380 1.68954 1.88838 1.47573 1.20969 1.00667 0.99782 0.93451 1.20694 0.97791 0.94612 0.98146 1.19765 1.00867 0.93594 0.97340 1.20745 0.98715 1.02007 0.95703 0.92599 0.92408 0.91790 0.89636 0.90183 0.95111 0.92683 0.92610 0.74392 0.82016 0.85137 0.84970 0.90894 0.91031 0.91296 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.29 10.24 37.16 0.38 -1.91 16 2 C 0.11 1.84 6.11 -4.04 -0.02 1.82 16 3 N -0.55 -11.18 2.47 -175.61 -0.43 -11.62 16 4 C 0.20 4.56 3.85 -5.19 -0.02 4.54 16 5 C -0.52 -14.05 8.34 -34.44 -0.29 -14.33 16 6 H 0.07 2.18 8.06 -52.49 -0.42 1.75 16 7 C 0.08 2.32 5.47 -17.82 -0.10 2.23 16 8 N -0.89 -26.99 13.96 55.43 0.77 -26.22 16 9 Si 0.87 21.37 27.47 -169.99 -4.67 16.70 16 10 H -0.27 -6.77 7.11 56.52 0.40 -6.37 16 11 H -0.29 -6.99 7.11 56.52 0.40 -6.59 16 12 H -0.27 -6.15 6.54 56.52 0.37 -5.78 16 13 C 0.51 10.17 7.67 -11.63 -0.09 10.08 16 14 O -0.56 -10.87 16.04 5.49 0.09 -10.78 16 15 C 0.49 9.61 7.58 -11.63 -0.09 9.52 16 16 O -0.43 -9.85 9.46 5.47 0.05 -9.80 16 17 N -0.66 -10.44 4.75 -10.30 -0.05 -10.49 16 18 C 0.17 2.58 6.30 -83.75 -0.53 2.05 16 19 C -0.11 -1.95 8.49 -39.34 -0.33 -2.28 16 20 C -0.02 -0.30 6.32 -39.53 -0.25 -0.55 16 21 Cl -0.07 -1.05 28.95 -51.86 -1.50 -2.55 16 22 C -0.13 -1.59 9.83 -39.50 -0.39 -1.98 16 23 C -0.09 -1.02 9.69 -39.62 -0.38 -1.41 16 24 C -0.11 -1.37 5.90 -104.42 -0.62 -1.99 16 25 C -0.11 -1.05 9.47 36.00 0.34 -0.71 16 26 H 0.05 0.80 8.14 -51.93 -0.42 0.38 16 27 H 0.06 0.82 8.14 -51.93 -0.42 0.39 16 28 H 0.06 0.72 8.14 -51.93 -0.42 0.30 16 29 H 0.09 1.41 8.11 -51.93 -0.42 0.99 16 30 H 0.08 1.31 7.36 -51.93 -0.38 0.92 16 31 H 0.03 0.69 7.08 -51.93 -0.37 0.32 16 32 H 0.06 1.32 5.27 -51.93 -0.27 1.04 16 33 H 0.26 7.53 8.31 -40.82 -0.34 7.19 16 34 H 0.42 5.67 7.28 -40.82 -0.30 5.38 16 35 H 0.16 3.42 6.11 -52.48 -0.32 3.09 16 36 H 0.13 1.30 8.06 -52.49 -0.42 0.88 16 37 H 0.13 1.02 8.06 -52.49 -0.42 0.60 16 38 H 0.07 0.57 8.14 -51.93 -0.42 0.14 16 39 H 0.07 0.53 8.09 -51.93 -0.42 0.11 16 40 H 0.07 0.67 7.16 -51.93 -0.37 0.30 16 LS Contribution 350.62 15.07 5.28 5.28 Total: -1.00 -31.50 350.62 -7.82 -39.32 By element: Atomic # 1 Polarization: 10.05 SS G_CDS: -4.98 Total: 5.07 kcal Atomic # 6 Polarization: 7.46 SS G_CDS: -2.39 Total: 5.08 kcal Atomic # 7 Polarization: -48.61 SS G_CDS: 0.29 Total: -48.32 kcal Atomic # 8 Polarization: -20.72 SS G_CDS: 0.14 Total: -20.58 kcal Atomic # 14 Polarization: 21.37 SS G_CDS: -4.67 Total: 16.70 kcal Atomic # 17 Polarization: -1.05 SS G_CDS: -1.50 Total: -2.55 kcal Total LS contribution 5.28 Total: 5.28 kcal Total: -31.50 -7.82 -39.32 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000123842328.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.683 kcal (2) G-P(sol) polarization free energy of solvation -31.496 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.813 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.822 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.319 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.635 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds