Wall clock time and date at job start Tue Mar 31 2020 14:17:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52997 * 109.47173 * 2 1 4 4 N 1.46499 * 109.47364 * 120.00226 * 2 1 3 5 5 C 1.46496 * 120.00059 * 299.99924 * 4 2 1 6 6 C 1.34776 * 120.00259 * 119.99735 * 4 2 1 7 7 O 1.21380 * 120.00070 * 3.61735 * 6 4 2 8 8 C 1.49266 * 120.00070 * 183.61172 * 6 4 2 9 9 O 1.21383 * 120.00073 * 354.18220 * 8 6 4 10 10 N 1.34774 * 119.99609 * 174.45952 * 8 6 4 11 11 C 1.38973 * 119.99608 * 183.97342 * 10 8 6 12 12 C 1.39556 * 119.84352 * 334.32905 * 11 10 8 13 13 C 1.36322 * 120.17366 * 179.72407 * 12 11 10 14 14 C 1.40940 * 119.85217 * 0.57182 * 13 12 11 15 15 C 1.41063 * 120.14863 * 179.72324 * 14 13 12 16 16 H 1.08007 * 119.99922 * 144.71406 * 15 14 13 17 17 C 1.39979 * 120.00531 * 324.70902 * 15 14 13 18 18 N 1.30821 * 119.99977 * 174.37017 * 17 15 14 19 19 Si 1.86796 * 119.99552 * 354.37053 * 17 15 14 20 20 H 1.48498 * 109.47154 * 88.83607 * 19 17 15 21 21 H 1.48501 * 109.47343 * 208.83379 * 19 17 15 22 22 H 1.48505 * 109.47459 * 328.83658 * 19 17 15 23 23 C 1.40884 * 119.69743 * 359.70203 * 14 13 12 24 24 C 1.36435 * 119.82111 * 359.97438 * 23 14 13 25 25 Cl 1.73597 * 119.92862 * 179.97438 * 24 23 14 26 26 H 1.09002 * 109.47331 * 299.99634 * 1 2 3 27 27 H 1.09001 * 109.47429 * 60.00077 * 1 2 3 28 28 H 1.08999 * 109.47047 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.46824 * 240.00248 * 2 1 3 30 30 H 1.09001 * 109.47079 * 59.99598 * 3 2 1 31 31 H 1.08999 * 109.47412 * 180.02562 * 3 2 1 32 32 H 1.09001 * 109.46880 * 300.00259 * 3 2 1 33 33 H 1.09000 * 109.47168 * 264.07624 * 5 4 2 34 34 H 1.09005 * 109.46632 * 24.07078 * 5 4 2 35 35 H 1.08997 * 109.47248 * 144.07084 * 5 4 2 36 36 H 0.96996 * 120.00257 * 3.96704 * 10 8 6 37 37 H 1.08005 * 119.91208 * 359.97438 * 12 11 10 38 38 H 1.07998 * 120.07301 * 180.24809 * 13 12 11 39 39 H 0.97004 * 119.99845 * 180.02562 * 18 17 15 40 40 H 1.07993 * 120.08845 * 180.02562 * 23 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 2.0184 -0.6906 1.1961 5 6 1.6645 -0.1902 2.5267 6 6 2.7932 -1.7865 1.0724 7 8 3.1406 -2.1630 -0.0279 8 6 3.2241 -2.5369 2.2886 9 8 2.9667 -2.1029 3.3926 10 7 3.9040 -3.6936 2.1609 11 6 4.2332 -4.4343 3.2898 12 6 4.3641 -3.7972 4.5246 13 6 4.6813 -4.5181 5.6373 14 6 4.8891 -5.9085 5.5368 15 6 5.2233 -6.6596 6.6831 16 1 4.8518 -7.6675 6.7955 17 6 6.0366 -6.0988 7.6748 18 7 6.2566 -6.7518 8.7869 19 14 6.8076 -4.4181 7.4103 20 1 5.8776 -3.3654 7.8922 21 1 8.0837 -4.3344 8.1652 22 1 7.0745 -4.2180 5.9632 23 6 4.7612 -6.5447 4.2863 24 6 4.4367 -5.8119 3.1822 25 17 4.2790 -6.5929 1.6399 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 1.8933 -0.5138 -0.8900 30 1 1.6766 1.9563 0.8900 31 1 3.1300 1.4425 -0.0005 32 1 1.6766 1.9563 -0.8900 33 1 2.4670 0.4454 2.9011 34 1 0.7424 0.3878 2.4641 35 1 1.5208 -1.0313 3.2049 36 1 4.1635 -4.0091 1.2812 37 1 4.2097 -2.7309 4.5995 38 1 4.7782 -4.0241 6.5927 39 1 6.8198 -6.3630 9.4743 40 1 4.9186 -7.6098 4.2021 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000453696666.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:17:23 Heat of formation + Delta-G solvation = -39.692483 kcal Electronic energy + Delta-G solvation = -24988.614056 eV Core-core repulsion = 21215.822675 eV Total energy + Delta-G solvation = -3772.791381 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 324.103 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -40.95547 -39.24160 -37.70546 -36.84459 -35.89219 -34.77511 -33.28789 -32.34792 -29.97912 -29.90877 -27.53566 -27.15297 -26.07194 -24.10504 -22.20191 -21.60053 -20.40411 -19.46690 -18.10272 -17.68190 -17.18776 -16.65754 -16.12341 -15.72273 -15.17602 -14.59053 -14.48792 -14.42806 -14.16256 -13.91479 -13.29022 -13.18065 -13.05987 -12.87224 -12.69987 -12.63410 -12.49121 -12.40800 -12.27168 -11.69478 -11.60099 -11.32607 -11.19924 -11.08160 -10.95714 -10.61731 -10.47527 -10.15330 -9.93217 -9.76934 -9.21916 -9.02538 -8.77859 -7.92212 -7.36078 -7.05790 -4.64859 1.37020 2.22496 2.34128 2.41912 2.78554 3.02356 3.13467 3.20868 3.34904 3.60344 3.86123 4.30349 4.43202 4.61642 4.75604 4.92572 5.03891 5.12251 5.25085 5.34551 5.44722 5.54492 5.62878 5.74631 5.79462 5.90516 5.94464 6.09049 6.20349 6.35870 6.40883 6.56605 6.80321 6.89996 7.03478 7.07921 7.26593 7.54681 7.62171 7.71908 7.85678 8.14448 8.21987 8.38561 8.57875 9.94435 Molecular weight = 324.10amu Principal moments of inertia in cm(-1) A = 0.017119 B = 0.003574 C = 0.003101 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1635.259622 B = 7833.073587 C = 9027.087325 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.162 4.162 2 C 0.126 3.874 3 C -0.160 4.160 4 N -0.583 5.583 5 C 0.062 3.938 6 C 0.510 3.490 7 O -0.527 6.527 8 C 0.490 3.510 9 O -0.508 6.508 10 N -0.609 5.609 11 C -0.003 4.003 12 C -0.063 4.063 13 C -0.223 4.223 14 C 0.095 3.905 15 C -0.432 4.432 16 H 0.096 0.904 17 C 0.080 3.920 18 N -0.805 5.805 19 Si 0.914 3.086 20 H -0.267 1.267 21 H -0.291 1.291 22 H -0.242 1.242 23 C -0.183 4.183 24 C 0.001 3.999 25 Cl -0.106 7.106 26 H 0.061 0.939 27 H 0.070 0.930 28 H 0.060 0.940 29 H 0.103 0.897 30 H 0.060 0.940 31 H 0.059 0.941 32 H 0.069 0.931 33 H 0.059 0.941 34 H 0.065 0.935 35 H 0.111 0.889 36 H 0.413 0.587 37 H 0.140 0.860 38 H 0.111 0.889 39 H 0.289 0.711 40 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.081 12.648 -12.301 19.011 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.220 4.220 2 C 0.023 3.977 3 C -0.218 4.218 4 N -0.317 5.317 5 C -0.080 4.080 6 C 0.293 3.707 7 O -0.404 6.404 8 C 0.273 3.727 9 O -0.386 6.386 10 N -0.252 5.252 11 C -0.097 4.097 12 C -0.083 4.083 13 C -0.242 4.242 14 C 0.091 3.909 15 C -0.460 4.460 16 H 0.114 0.886 17 C -0.139 4.139 18 N -0.429 5.429 19 Si 0.741 3.259 20 H -0.193 1.193 21 H -0.218 1.218 22 H -0.165 1.165 23 C -0.203 4.203 24 C -0.028 4.028 25 Cl -0.078 7.078 26 H 0.080 0.920 27 H 0.088 0.912 28 H 0.079 0.921 29 H 0.121 0.879 30 H 0.079 0.921 31 H 0.079 0.921 32 H 0.088 0.912 33 H 0.078 0.922 34 H 0.083 0.917 35 H 0.129 0.871 36 H 0.250 0.750 37 H 0.157 0.843 38 H 0.129 0.871 39 H 0.099 0.901 40 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -7.004 12.612 -12.002 18.766 hybrid contribution 0.432 0.448 -0.441 0.763 sum -6.572 13.060 -12.443 19.199 Atomic orbital electron populations 1.22157 0.94496 1.02751 1.02577 1.21204 0.94382 0.93364 0.88726 1.22128 1.01881 0.95256 1.02523 1.47780 1.48960 1.26537 1.08446 1.22422 1.00199 1.02474 0.82911 1.20222 0.79598 0.81368 0.89465 1.90735 1.55009 1.67271 1.27367 1.19876 0.80530 0.83003 0.89306 1.90576 1.54441 1.67016 1.26571 1.42619 1.51406 1.20979 1.10219 1.16855 1.17391 0.88259 0.87242 1.20827 0.96884 1.00353 0.90249 1.20899 1.10418 0.95211 0.97706 1.17723 0.89480 0.91610 0.92082 1.19491 1.25128 1.02226 0.99138 0.88615 1.26187 0.95062 0.99450 0.93194 1.69602 1.29614 1.38677 1.05020 0.86303 0.77700 0.80884 0.81037 1.19268 1.21825 1.16481 1.20617 1.09941 0.99477 0.90276 1.20239 1.06433 0.90341 0.85739 1.98290 1.96749 1.81195 1.31548 0.91966 0.91154 0.92059 0.87932 0.92067 0.92144 0.91238 0.92248 0.91682 0.87057 0.75035 0.84307 0.87113 0.90065 0.86246 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -1.23 9.18 37.16 0.34 -0.89 16 2 C 0.13 1.21 3.24 -67.93 -0.22 0.99 16 3 C -0.16 -1.22 9.19 37.16 0.34 -0.88 16 4 N -0.58 -7.00 2.76 -174.52 -0.48 -7.48 16 5 C 0.06 0.66 8.58 59.84 0.51 1.17 16 6 C 0.51 7.66 7.73 -11.67 -0.09 7.57 16 7 O -0.53 -8.72 15.82 5.47 0.09 -8.63 16 8 C 0.49 8.25 7.65 -11.67 -0.09 8.16 16 9 O -0.51 -8.99 10.00 5.47 0.05 -8.94 16 10 N -0.61 -10.83 5.14 -10.17 -0.05 -10.89 16 11 C 0.00 -0.07 6.46 -83.60 -0.54 -0.61 16 12 C -0.06 -1.36 8.71 -39.78 -0.35 -1.71 16 13 C -0.22 -5.12 6.84 -39.25 -0.27 -5.39 16 14 C 0.10 2.27 5.11 -106.80 -0.55 1.72 16 15 C -0.43 -10.99 9.60 -37.86 -0.36 -11.36 16 16 H 0.10 2.55 8.06 -52.48 -0.42 2.12 16 17 C 0.08 2.01 5.50 -17.33 -0.10 1.91 16 18 N -0.81 -20.53 13.93 55.55 0.77 -19.76 16 19 Si 0.91 19.90 24.38 -169.99 -4.15 15.76 16 20 H -0.27 -5.63 6.64 56.52 0.38 -5.26 16 21 H -0.29 -6.14 7.11 56.52 0.40 -5.74 16 22 H -0.24 -5.38 6.58 56.52 0.37 -5.01 16 23 C -0.18 -4.02 9.50 -39.23 -0.37 -4.39 16 24 C 0.00 0.01 6.30 -39.70 -0.25 -0.24 16 25 Cl -0.11 -1.84 27.75 -51.86 -1.44 -3.28 16 26 H 0.06 0.43 6.67 -51.93 -0.35 0.08 16 27 H 0.07 0.41 8.14 -51.93 -0.42 -0.01 16 28 H 0.06 0.53 8.14 -51.93 -0.42 0.11 16 29 H 0.10 1.12 6.90 -51.93 -0.36 0.76 16 30 H 0.06 0.43 7.67 -51.93 -0.40 0.03 16 31 H 0.06 0.53 8.14 -51.93 -0.42 0.10 16 32 H 0.07 0.41 8.14 -51.93 -0.42 -0.01 16 33 H 0.06 0.62 8.14 -51.93 -0.42 0.20 16 34 H 0.06 0.53 6.44 -51.93 -0.33 0.19 16 35 H 0.11 1.42 5.34 -51.94 -0.28 1.15 16 36 H 0.41 6.88 7.21 -40.82 -0.29 6.58 16 37 H 0.14 2.88 5.48 -52.48 -0.29 2.59 16 38 H 0.11 2.53 4.39 -52.49 -0.23 2.29 16 39 H 0.29 6.67 8.30 -40.82 -0.34 6.33 16 40 H 0.12 2.50 8.06 -52.49 -0.42 2.08 16 LS Contribution 338.96 15.07 5.11 5.11 Total: -1.00 -26.69 338.96 -6.76 -33.45 By element: Atomic # 1 Polarization: 13.28 SS G_CDS: -4.68 Total: 8.61 kcal Atomic # 6 Polarization: -1.96 SS G_CDS: -1.99 Total: -3.95 kcal Atomic # 7 Polarization: -38.37 SS G_CDS: 0.24 Total: -38.13 kcal Atomic # 8 Polarization: -17.71 SS G_CDS: 0.14 Total: -17.57 kcal Atomic # 14 Polarization: 19.90 SS G_CDS: -4.15 Total: 15.76 kcal Atomic # 17 Polarization: -1.84 SS G_CDS: -1.44 Total: -3.28 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -26.69 -6.76 -33.45 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000453696666.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.242 kcal (2) G-P(sol) polarization free energy of solvation -26.691 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.933 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.760 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.450 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.692 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds