Wall clock time and date at job start Tue Mar 31 2020 13:46:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38377 * 119.86504 * 2 1 4 4 C 1.37978 * 120.17673 * 180.02562 * 3 2 1 5 5 C 1.39337 * 119.91020 * 359.97438 * 4 3 2 6 6 C 1.48384 * 120.13974 * 179.97438 * 5 4 3 7 7 N 1.30864 * 126.31718 * 0.02887 * 6 5 4 8 8 O 1.21274 * 110.32436 * 179.97438 * 7 6 5 9 9 C 1.34190 * 109.92295 * 0.02562 * 8 7 6 10 10 C 1.47877 * 126.55967 * 179.97438 * 9 8 7 11 11 C 1.39931 * 120.02531 * 180.27723 * 10 9 8 12 12 C 1.38328 * 120.35426 * 180.25945 * 11 10 9 13 13 C 1.37745 * 120.41117 * 359.75950 * 12 11 10 14 14 C 1.40758 * 120.03911 * 359.97438 * 13 12 11 15 15 C 1.41432 * 120.17775 * 179.97438 * 14 13 12 16 16 H 1.08003 * 119.99912 * 155.18737 * 15 14 13 17 17 C 1.39928 * 120.00034 * 335.18994 * 15 14 13 18 18 N 1.30826 * 120.00014 * 342.18416 * 17 15 14 19 19 Si 1.86804 * 120.00213 * 162.18683 * 17 15 14 20 20 H 1.48500 * 109.46939 * 94.65506 * 19 17 15 21 21 H 1.48501 * 109.47263 * 214.65619 * 19 17 15 22 22 H 1.48505 * 109.47023 * 334.65932 * 19 17 15 23 23 C 1.38979 * 120.02240 * 0.02562 * 10 9 8 24 24 N 1.31953 * 106.88141 * 0.23766 * 9 8 7 25 25 C 1.39526 * 119.72753 * 0.25411 * 5 4 3 26 26 F 1.35095 * 120.08824 * 179.74724 * 25 5 4 27 27 C 1.38226 * 119.86661 * 179.97438 * 2 1 3 28 28 H 1.09002 * 109.47010 * 89.99788 * 1 2 3 29 29 H 1.09000 * 109.46747 * 209.99945 * 1 2 3 30 30 H 1.09001 * 109.46801 * 329.99920 * 1 2 3 31 31 H 1.08004 * 119.90964 * 0.02562 * 3 2 1 32 32 H 1.08007 * 120.04357 * 180.02562 * 4 3 2 33 33 H 1.08002 * 119.81606 * 0.02562 * 11 10 9 34 34 H 1.07999 * 119.79005 * 179.74760 * 12 11 10 35 35 H 1.08003 * 119.98209 * 179.97438 * 13 12 11 36 36 H 0.97006 * 119.99873 * 180.02562 * 18 17 15 37 37 H 1.07996 * 120.20211 * 0.02562 * 23 10 9 38 38 H 1.08001 * 119.95154 * 0.02562 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1961 1.2000 0.0000 4 6 3.5758 1.2075 -0.0005 5 6 4.2772 0.0035 -0.0005 6 6 5.7610 0.0057 -0.0017 7 7 6.5345 1.0612 -0.0022 8 8 7.7008 0.7287 -0.0026 9 6 7.7947 -0.6099 -0.0030 10 6 9.0412 -1.4054 -0.0040 11 6 8.9797 -2.8034 -0.0101 12 6 10.1414 -3.5543 -0.0057 13 6 11.3718 -2.9351 -0.0003 14 6 11.4535 -1.5299 0.0002 15 6 12.7154 -0.8911 0.0063 16 1 12.8156 0.1103 -0.3856 17 6 13.8340 -1.5566 0.5200 18 7 13.6763 -2.5966 1.2979 19 14 15.5524 -0.9599 0.0954 20 1 16.0375 -0.0480 1.1624 21 1 16.4676 -2.1242 -0.0147 22 1 15.5182 -0.2330 -1.1991 23 6 10.2748 -0.7652 -0.0043 24 7 6.5620 -1.0805 -0.0079 25 6 3.5785 -1.2042 -0.0054 26 9 4.2511 -2.3758 -0.0106 27 6 2.1953 -1.1987 0.0005 28 1 -0.3633 0.0000 -1.0277 29 1 -0.3633 -0.8900 0.5138 30 1 -0.3633 0.8900 0.5139 31 1 1.6524 2.1332 0.0004 32 1 4.1115 2.1454 -0.0001 33 1 8.0199 -3.2986 -0.0144 34 1 10.0832 -4.6327 -0.0064 35 1 12.2744 -3.5282 0.0035 36 1 14.4518 -3.0577 1.6543 37 1 10.3270 0.3135 -0.0033 38 1 1.6524 -2.1323 0.0005 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000460144073.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 13:46:39 Heat of formation + Delta-G solvation = 59.639814 kcal Electronic energy + Delta-G solvation = -25068.502893 eV Core-core repulsion = 21178.991428 eV Total energy + Delta-G solvation = -3889.511465 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 324.101 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -48.81711 -45.00247 -39.42537 -37.75814 -35.62013 -34.15347 -33.25096 -31.87849 -30.87370 -30.09207 -29.19509 -27.71185 -25.48089 -24.11647 -23.54973 -22.64637 -21.72870 -20.69534 -20.30525 -18.17739 -17.64690 -17.16457 -16.89605 -16.30534 -15.96005 -15.60489 -15.51097 -14.78985 -14.53457 -14.38202 -13.94454 -13.85494 -13.50235 -13.47013 -13.00604 -12.54301 -12.44785 -12.43139 -12.11819 -12.02210 -11.99858 -11.57152 -11.41150 -11.27731 -11.19489 -10.90409 -10.72005 -10.56885 -10.11241 -10.00486 -9.66120 -9.27546 -9.12878 -8.63888 -7.73212 -7.53590 -6.90688 -4.51906 0.49456 0.94966 1.29256 2.39448 2.65028 3.01173 3.02455 3.07822 3.20203 3.25127 3.47353 3.61191 3.84807 3.99990 4.20477 4.43670 4.47542 4.56261 4.87545 4.99720 5.17329 5.20374 5.26179 5.38982 5.45884 5.66023 5.76273 5.84226 5.93778 6.06031 6.12572 6.15573 6.24394 6.35911 6.59770 6.70736 6.81297 6.93033 7.07588 7.21972 7.54157 7.74920 7.81694 7.99562 8.40305 8.51248 8.68963 8.72139 10.05073 Molecular weight = 324.10amu Principal moments of inertia in cm(-1) A = 0.034187 B = 0.002413 C = 0.002270 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 818.830645 B =11602.321591 C =12331.030978 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.045 4.045 3 C -0.137 4.137 4 C -0.053 4.053 5 C -0.054 4.054 6 C 0.202 3.798 7 N -0.390 5.390 8 O 0.078 5.922 9 C 0.269 3.731 10 C -0.026 4.026 11 C -0.174 4.174 12 C -0.111 4.111 13 C -0.131 4.131 14 C 0.102 3.898 15 C -0.459 4.459 16 H 0.082 0.918 17 C 0.076 3.924 18 N -0.792 5.792 19 Si 0.910 3.090 20 H -0.270 1.270 21 H -0.275 1.275 22 H -0.259 1.259 23 C -0.178 4.178 24 N -0.481 5.481 25 C 0.148 3.852 26 F -0.112 7.112 27 C -0.163 4.163 28 H 0.077 0.923 29 H 0.071 0.929 30 H 0.072 0.928 31 H 0.135 0.865 32 H 0.140 0.860 33 H 0.107 0.893 34 H 0.101 0.899 35 H 0.125 0.875 36 H 0.283 0.717 37 H 0.107 0.893 38 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -18.371 3.530 -1.834 18.797 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.046 4.046 3 C -0.155 4.155 4 C -0.073 4.073 5 C -0.056 4.056 6 C -0.068 4.068 7 N -0.100 5.100 8 O 0.019 5.981 9 C 0.055 3.945 10 C -0.029 4.029 11 C -0.195 4.195 12 C -0.130 4.130 13 C -0.151 4.151 14 C 0.100 3.900 15 C -0.488 4.488 16 H 0.100 0.900 17 C -0.143 4.143 18 N -0.417 5.417 19 Si 0.734 3.266 20 H -0.195 1.195 21 H -0.200 1.200 22 H -0.183 1.183 23 C -0.199 4.199 24 N -0.213 5.213 25 C 0.126 3.874 26 F -0.090 7.090 27 C -0.182 4.182 28 H 0.095 0.905 29 H 0.090 0.910 30 H 0.091 0.909 31 H 0.153 0.847 32 H 0.158 0.842 33 H 0.125 0.875 34 H 0.119 0.881 35 H 0.143 0.857 36 H 0.094 0.906 37 H 0.125 0.875 38 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -18.827 3.826 -1.691 19.286 hybrid contribution 1.176 -0.034 -0.010 1.177 sum -17.651 3.792 -1.701 18.133 Atomic orbital electron populations 1.20854 0.90159 1.03375 1.02907 1.19889 0.96592 0.92133 0.95996 1.20985 0.93367 0.98099 1.03041 1.21083 0.94076 0.96762 0.95414 1.17437 0.86383 0.93465 1.08349 1.23504 0.95836 0.85011 1.02494 1.74766 0.89527 1.23092 1.22600 1.85342 1.21317 1.25199 1.66254 1.27052 0.94973 0.80466 0.92039 1.17040 0.85043 0.91463 1.09343 1.20432 0.97888 0.90877 1.10299 1.20658 0.92651 0.97991 1.01685 1.21620 0.96479 0.95108 1.01911 1.17482 0.91934 0.91731 0.88902 1.19564 0.91712 1.01922 1.35634 0.89962 1.25917 1.01810 0.94082 0.92446 1.69791 1.33212 1.16988 1.21715 0.86264 0.80791 0.79313 0.80233 1.19475 1.19962 1.18292 1.21151 0.90669 0.98501 1.09613 1.72398 0.99063 1.27228 1.22631 1.17625 0.89766 0.80935 0.99059 1.91621 1.80242 1.44365 1.92790 1.20970 0.91518 0.99695 1.06006 0.90480 0.91026 0.90924 0.84696 0.84185 0.87490 0.88063 0.85708 0.90584 0.87453 0.84083 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.62 10.01 36.01 0.36 -0.26 16 2 C -0.05 -0.40 5.88 -104.57 -0.62 -1.01 16 3 C -0.14 -1.25 9.68 -39.63 -0.38 -1.63 16 4 C -0.05 -0.64 9.69 -39.27 -0.38 -1.02 16 5 C -0.05 -0.82 5.88 -104.83 -0.62 -1.44 16 6 C 0.20 3.80 7.78 -156.29 -1.22 2.58 16 7 N -0.39 -7.47 11.84 31.20 0.37 -7.10 16 8 O 0.08 1.58 11.10 16.68 0.19 1.77 16 9 C 0.27 5.71 8.00 -13.79 -0.11 5.60 16 10 C -0.03 -0.59 5.87 -105.04 -0.62 -1.20 16 11 C -0.17 -3.82 9.71 -38.91 -0.38 -4.20 16 12 C -0.11 -2.44 10.01 -39.73 -0.40 -2.84 16 13 C -0.13 -3.16 8.69 -38.81 -0.34 -3.50 16 14 C 0.10 2.55 5.57 -106.87 -0.59 1.95 16 15 C -0.46 -11.42 9.05 -37.73 -0.34 -11.76 16 16 H 0.08 1.96 7.91 -52.48 -0.41 1.55 16 17 C 0.08 1.79 5.13 -17.35 -0.09 1.70 16 18 N -0.79 -19.29 10.97 55.55 0.61 -18.68 16 19 Si 0.91 17.70 29.59 -169.99 -5.03 12.67 16 20 H -0.27 -5.21 7.11 56.52 0.40 -4.81 16 21 H -0.27 -5.23 7.11 56.52 0.40 -4.83 16 22 H -0.26 -5.02 7.11 56.52 0.40 -4.62 16 23 C -0.18 -4.15 9.47 -38.45 -0.36 -4.51 16 24 N -0.48 -9.99 9.92 -10.22 -0.10 -10.09 16 25 C 0.15 2.12 7.28 -39.07 -0.28 1.84 16 26 F -0.11 -1.87 15.80 2.25 0.04 -1.84 16 27 C -0.16 -1.72 9.66 -39.56 -0.38 -2.11 16 28 H 0.08 0.35 8.14 -51.93 -0.42 -0.07 16 29 H 0.07 0.33 8.08 -51.93 -0.42 -0.09 16 30 H 0.07 0.31 8.08 -51.93 -0.42 -0.11 16 31 H 0.14 0.84 8.06 -52.48 -0.42 0.42 16 32 H 0.14 1.60 7.87 -52.48 -0.41 1.18 16 33 H 0.11 2.24 7.86 -52.49 -0.41 1.83 16 34 H 0.10 1.94 8.06 -52.49 -0.42 1.52 16 35 H 0.13 3.07 6.17 -52.48 -0.32 2.75 16 36 H 0.28 6.26 8.30 -40.82 -0.34 5.92 16 37 H 0.11 2.36 7.93 -52.49 -0.42 1.94 16 38 H 0.14 1.17 8.06 -52.49 -0.42 0.75 16 LS Contribution 342.40 15.07 5.16 5.16 Total: -1.00 -27.44 342.40 -9.16 -36.60 By element: Atomic # 1 Polarization: 6.97 SS G_CDS: -3.65 Total: 3.32 kcal Atomic # 6 Polarization: -15.07 SS G_CDS: -6.75 Total: -21.82 kcal Atomic # 7 Polarization: -36.74 SS G_CDS: 0.88 Total: -35.86 kcal Atomic # 8 Polarization: 1.58 SS G_CDS: 0.19 Total: 1.77 kcal Atomic # 9 Polarization: -1.87 SS G_CDS: 0.04 Total: -1.84 kcal Atomic # 14 Polarization: 17.70 SS G_CDS: -5.03 Total: 12.67 kcal Total LS contribution 5.16 Total: 5.16 kcal Total: -27.44 -9.16 -36.60 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000460144073.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 96.239 kcal (2) G-P(sol) polarization free energy of solvation -27.435 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 68.804 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.164 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.599 kcal (6) G-S(sol) free energy of system = (1) + (5) 59.640 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds